Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lachancea_20fermentati_20[genbank_20GCA_5F900074765.1_202016-10-26]
8 sequences; 10,264,457 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq1 147 3e-30
seq2 95.1 2e-14
>seq1
Length=762788
Score = 147 bits (162), Expect = 3e-30
Identities = 397/598 (66%), Gaps = 7/598 (1%)
Strand=Plus/Minus
Query 124996 TGTTTCCCATCAGGTATCATGACATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTT 125055
|||| ||||||| ||| || || |||||| || ||||| ||| |||| || || |
Sbjct 619795 TGTTCCCCATCAAGTACCACGAGATTTGGCAAGCATACAAGCGCGCTGAGGCGTCGTTCT 619736
Query 125056 GGACGGTCGAAGAGGTCGATCTGTCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTG 125115
|||| | ||| ||| ||||| |||||||||| | |||| ||| | | || ||| |
Sbjct 619735 GGACCGCCGAGGAGATCGATTTGTCCAAGGATATTCACGACTGGAACAACCGCATGAACG 619676
Query 125116 AAACTGAGCGAGAGTTTATATCGCACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCG 125175
| || || || | |||| | ||||| |||||||| | ||||| || || |
Sbjct 619675 AGCACGAACGTTTCTTCCTCTCGCGTGTGTTGGCATTCTTTGCTGCGTCCGACGGTATTG 619616
Query 125176 TCAACGACAATCTGTT-GACACGATTCTCTCAAGA-GTTGACCATTCCAGAGGTGTCGTG 125233
||||||| || || | || | ||||| || ||| | || ||||| | |||
Sbjct 619615 TCAACGAGAACTTGGTCGAGAAC-TTCTCAGCCGAAGTTCAA-ATCCCAGAAGCCAAGTG 619558
Query 125234 CTTTTACGGATTCCAAATCATGATTGAGAACGTGCACTCGGAAATGTACTCTACACTGAT 125293
||||||||| ||||| |||||||| || ||| | ||||| || | |||||| |||||
Sbjct 619557 CTTTTACGGGTTCCAGATCATGATGGAAAACATCCACTCCGAGACCTACTCTCTGCTGAT 619498
Query 125294 TGACATGTACATTCGCGATCCGCAACGTAAAC-ACATGCTCTTTAACGCAATCGACACGG 125352
||||| ||||| || || ||| | | | | | || || || || || || |
Sbjct 619497 TGACACCTACATCAAAGA-CCCCAAGGAGAGCGATTTCCTATTCAATGCCATTGAAAATA 619439
Query 125353 TGCCGTCTATACGTAAAAAGGCTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTT 125412
| || || | ||||| |||||| || | |||||| | ||||| || |
Sbjct 619438 TTCCTCAGATCAAGGAGAAGGCCGAATGGGCCATCAGATGGATCCAGGACGAAGAGGCCC 619379
Query 125413 CGTACGCCGACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTT 125472
| || || ||| |||| || || || ||||| || || | ||||| || || |
Sbjct 619378 TATTTGCAGAGAGATTGGTCGCCTTTGCTGCCGTGGAAGGTGTTTTCTTCTCCGGATCCT 619319
Query 125473 TTGCGGCCATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACG 125532
|||| || || || ||||| |||||| || | |||||||| || ||| | ||| |
Sbjct 619318 TTGCCGCTATTTTCTGGCTAAAGAAGAAAGGTTTGATGCCCGGTCTAACGTTCTCTAATG 619259
Query 125533 AGTTTATATCTCGAGACGAGGGCCTACACTGTGACTTTGCCATTCTACTGTTT-CGCA 125589
|| | || | |||||||||| || ||| ||| ||||| ||| || ||| ||||
Sbjct 619258 AGCTAATTTGCAGAGACGAGGGTCTTCACACTGATTTTGCATGTCTTCTATTTGCGCA 619201
>seq2
Length=1086951
Score = 95.1 bits (104), Expect = 2e-14
Identities = 324/491 (66%), Gaps = 18/491 (4%)
Strand=Plus/Minus
Query 96864 CGATACGTTACACAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCT 96923
|| |||||| || || ||||| || | ||||| ||| | || | ||||| |||||
Sbjct 390696 CGTTACGTTGATCAAGGTGGCAACAAGAGACCAGGTGCTTTTGCAATTTACTTAGAACCA 390637
Query 96924 TGGCACGCGGACGTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCA 96983
|||||| | || | || |||||| |||| || || |||||| || |||||
Sbjct 390636 TGGCACTCTGATATCTTCGACTTTGTCGACATCCGGAAAAACCACGGTAAGGAAGAAATC 390577
Query 96984 CGAGCCAGGGACTTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCG-TCA- 97041
|| ||||| || ||||| ||| || ||||| |||||||||||||||||| | | |||
Sbjct 390576 CGTGCCAGAGATTTGTTCCCTGCTCTATGGGTTCCAGATTTGTTCATGAAGAGAGTTCAA 390517
Query 97042 -ACGACGGTGGCTACTGGAGCCTAATGTGCCCCGACT-CGTCACCCGGTCTGTCCGATTG 97099
| |||||| | |||| ||| | | |||| | | | |||||||| |||||
Sbjct 390516 GAGAACGGTG---AATGGA-CCTTGTTTTCCCCTAGTGAAGCTCCCGGTCTTGCCGATGT 390461
Query 97100 CTGGGGCGAAGAGTTTGAGGC--CAAGTACACGGCCTACGAGCAAGAGGGCC--GATACG 97155
|| || || || || || || | | ||| |||| ||||||||||| | || |
Sbjct 390460 CTATGGTGATGAATTCGAAGCTTTATATGAACG--TTACGTGCAAGAGGGCCGTGGTA-G 390404
Query 97156 TGAGACGAGTCGATGCACGAGAA-CTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACT 97214
|||| | || | || | |||| || ||| | ||||| | |||||| || ||
Sbjct 390403 AAAGACTA-TCAAAGCTC-AGAAGCTATGGTATGCCATTCTAGAAGCTCAGACGGAAACC 390346
Query 97215 GGAACTCCGTACATTCTCTACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTG 97274
|| ||||| | ||| | ||||| ||| | || | || |||||| || |
Sbjct 390345 GGTACTCCATTCATGATTTACAAAGATTCTTGTAACAGAAAGTCTAACCAAAAGAACCTT 390286
Query 97275 GGCACCATCAAGGGCTCCAATCTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAG 97334
|| ||||||||| || || |||| ||||| || |||||| | || || || ||
Sbjct 390285 GGTACCATCAAGTCTTCTAACTTGTGTTGTGAAATCGTCGAGTACTCTTCCCCAGAGGAA 390226
Query 97335 ACGGCAGTTTG 97345
|| || || ||
Sbjct 390225 ACTGCCGTGTG 390215
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 741059125894080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |