Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lachancea_20fermentati_20[genbank_20GCA_5F900074765.1_202016-10-26] 8 sequences; 10,264,457 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq1 147 3e-30 seq2 95.1 2e-14 >seq1 Length=762788 Score = 147 bits (162), Expect = 3e-30 Identities = 397/598 (66%), Gaps = 7/598 (1%) Strand=Plus/Minus Query 124996 TGTTTCCCATCAGGTATCATGACATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTT 125055 |||| ||||||| ||| || || |||||| || ||||| ||| |||| || || | Sbjct 619795 TGTTCCCCATCAAGTACCACGAGATTTGGCAAGCATACAAGCGCGCTGAGGCGTCGTTCT 619736 Query 125056 GGACGGTCGAAGAGGTCGATCTGTCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTG 125115 |||| | ||| ||| ||||| |||||||||| | |||| ||| | | || ||| | Sbjct 619735 GGACCGCCGAGGAGATCGATTTGTCCAAGGATATTCACGACTGGAACAACCGCATGAACG 619676 Query 125116 AAACTGAGCGAGAGTTTATATCGCACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCG 125175 | || || || | |||| | ||||| |||||||| | ||||| || || | Sbjct 619675 AGCACGAACGTTTCTTCCTCTCGCGTGTGTTGGCATTCTTTGCTGCGTCCGACGGTATTG 619616 Query 125176 TCAACGACAATCTGTT-GACACGATTCTCTCAAGA-GTTGACCATTCCAGAGGTGTCGTG 125233 ||||||| || || | || | ||||| || ||| | || ||||| | ||| Sbjct 619615 TCAACGAGAACTTGGTCGAGAAC-TTCTCAGCCGAAGTTCAA-ATCCCAGAAGCCAAGTG 619558 Query 125234 CTTTTACGGATTCCAAATCATGATTGAGAACGTGCACTCGGAAATGTACTCTACACTGAT 125293 ||||||||| ||||| |||||||| || ||| | ||||| || | |||||| ||||| Sbjct 619557 CTTTTACGGGTTCCAGATCATGATGGAAAACATCCACTCCGAGACCTACTCTCTGCTGAT 619498 Query 125294 TGACATGTACATTCGCGATCCGCAACGTAAAC-ACATGCTCTTTAACGCAATCGACACGG 125352 ||||| ||||| || || ||| | | | | | || || || || || || | Sbjct 619497 TGACACCTACATCAAAGA-CCCCAAGGAGAGCGATTTCCTATTCAATGCCATTGAAAATA 619439 Query 125353 TGCCGTCTATACGTAAAAAGGCTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTT 125412 | || || | ||||| |||||| || | |||||| | ||||| || | Sbjct 619438 TTCCTCAGATCAAGGAGAAGGCCGAATGGGCCATCAGATGGATCCAGGACGAAGAGGCCC 619379 Query 125413 CGTACGCCGACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTT 125472 | || || ||| |||| || || || ||||| || || | ||||| || || | Sbjct 619378 TATTTGCAGAGAGATTGGTCGCCTTTGCTGCCGTGGAAGGTGTTTTCTTCTCCGGATCCT 619319 Query 125473 TTGCGGCCATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACG 125532 |||| || || || ||||| |||||| || | |||||||| || ||| | ||| | Sbjct 619318 TTGCCGCTATTTTCTGGCTAAAGAAGAAAGGTTTGATGCCCGGTCTAACGTTCTCTAATG 619259 Query 125533 AGTTTATATCTCGAGACGAGGGCCTACACTGTGACTTTGCCATTCTACTGTTT-CGCA 125589 || | || | |||||||||| || ||| ||| ||||| ||| || ||| |||| Sbjct 619258 AGCTAATTTGCAGAGACGAGGGTCTTCACACTGATTTTGCATGTCTTCTATTTGCGCA 619201 >seq2 Length=1086951 Score = 95.1 bits (104), Expect = 2e-14 Identities = 324/491 (66%), Gaps = 18/491 (4%) Strand=Plus/Minus Query 96864 CGATACGTTACACAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCT 96923 || |||||| || || ||||| || | ||||| ||| | || | ||||| ||||| Sbjct 390696 CGTTACGTTGATCAAGGTGGCAACAAGAGACCAGGTGCTTTTGCAATTTACTTAGAACCA 390637 Query 96924 TGGCACGCGGACGTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCA 96983 |||||| | || | || |||||| |||| || || |||||| || ||||| Sbjct 390636 TGGCACTCTGATATCTTCGACTTTGTCGACATCCGGAAAAACCACGGTAAGGAAGAAATC 390577 Query 96984 CGAGCCAGGGACTTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCG-TCA- 97041 || ||||| || ||||| ||| || ||||| |||||||||||||||||| | | ||| Sbjct 390576 CGTGCCAGAGATTTGTTCCCTGCTCTATGGGTTCCAGATTTGTTCATGAAGAGAGTTCAA 390517 Query 97042 -ACGACGGTGGCTACTGGAGCCTAATGTGCCCCGACT-CGTCACCCGGTCTGTCCGATTG 97099 | |||||| | |||| ||| | | |||| | | | |||||||| ||||| Sbjct 390516 GAGAACGGTG---AATGGA-CCTTGTTTTCCCCTAGTGAAGCTCCCGGTCTTGCCGATGT 390461 Query 97100 CTGGGGCGAAGAGTTTGAGGC--CAAGTACACGGCCTACGAGCAAGAGGGCC--GATACG 97155 || || || || || || || | | ||| |||| ||||||||||| | || | Sbjct 390460 CTATGGTGATGAATTCGAAGCTTTATATGAACG--TTACGTGCAAGAGGGCCGTGGTA-G 390404 Query 97156 TGAGACGAGTCGATGCACGAGAA-CTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACT 97214 |||| | || | || | |||| || ||| | ||||| | |||||| || || Sbjct 390403 AAAGACTA-TCAAAGCTC-AGAAGCTATGGTATGCCATTCTAGAAGCTCAGACGGAAACC 390346 Query 97215 GGAACTCCGTACATTCTCTACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTG 97274 || ||||| | ||| | ||||| ||| | || | || |||||| || | Sbjct 390345 GGTACTCCATTCATGATTTACAAAGATTCTTGTAACAGAAAGTCTAACCAAAAGAACCTT 390286 Query 97275 GGCACCATCAAGGGCTCCAATCTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAG 97334 || ||||||||| || || |||| ||||| || |||||| | || || || || Sbjct 390285 GGTACCATCAAGTCTTCTAACTTGTGTTGTGAAATCGTCGAGTACTCTTCCCCAGAGGAA 390226 Query 97335 ACGGCAGTTTG 97345 || || || || Sbjct 390225 ACTGCCGTGTG 390215 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741059125894080