Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lachancea_20fermentati_20[genbank_20GCA_5F900074765.1_202016-10-26]
8 sequences; 10,264,457 total letters
Query= NC_005038.1
Length=99657
Score E
Sequences producing significant alignments: (Bits) Value
seq4 84.2 1e-11
>seq4
Length=1192607
Score = 84.2 bits (92), Expect = 1e-11
Identities = 158/232 (68%), Gaps = 8/232 (3%)
Strand=Plus/Minus
Query 33142 ACCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGA 33201
||| ||||||| || ||| ||||| || || || || || ||||| ||||||||||||||
Sbjct 499302 ACCACCTCTTAGCCTCAAAACCAAGTGTAAGGTAGATTCCTTTTGAATATTGTAATCAGA 499243
Query 33202 CAAATTGAGTT----GGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCG 33257
| ||||| || ||||||||||| || || || || | ||||||||| |
Sbjct 499242 AA----GAGTTCTGCCATCCTCCAATTGCTTACCGGCGAAAATCAATCTTTGCTGGTCAG 499187
Query 33258 TGGGTATGCCTTCTTTTTCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTT 33317
|| || ||||| || || |||| ||| || | | || || || || ||
Sbjct 499186 GTGGAATACCTTCCTTGTCTTGAATCTTGGATTTGACATTGTCGATGGTATCAGAGGATT 499127
Query 33318 GAACGTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369
|| |||| || || || || || || | ||| || |||||||| |||||
Sbjct 499126 CGACTTCCAAGGTAATAGTCTTACCTGTCAAAGTCTTGACGAAAATCTGCAT 499075
Score = 82.4 bits (90), Expect = 5e-11
Identities = 160/236 (68%), Gaps = 8/236 (3%)
Strand=Plus/Minus
Query 33142 ACCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGA 33201
||| ||||||| || ||| |||| || || || || || ||||| ||||||||||||||
Sbjct 498846 ACCACCTCTTAGCCTCAAAACCAGGTGTAAGGTAGATTCCTTTTGAATATTGTAATCAGA 498787
Query 33202 CAAATTGAGTT----GGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCG 33257
| ||||| || ||||| ||||| ||| || || || | ||| || || |
Sbjct 498786 AA----GAGTTCTGCCATCCTCCAACTGCTTACCAGCGAAAATCAATCTTTGTTGATCAG 498731
Query 33258 TGGGTATGCCTTCTTTTTCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTT 33317
|| || ||||| || || ||| ||| || | | || || || || ||
Sbjct 498730 GTGGAATACCTTCCTTATCCTGGATCTTGGATTTGACGTTGTCGATGGTATCAGAGGATT 498671
Query 33318 GAACGTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCATGTTT 33373
||| |||||||| || || || || || | ||| || |||||||| ||||| |||
Sbjct 498670 CAACCTCCAGAGTGATGGTCTTGCCGGTTAAAGTCTTGACGAAAATCTGCATTTTT 498615
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 318777568919184
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |