Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lachancea_20fermentati_20[genbank_20GCA_5F900074765.1_202016-10-26] 8 sequences; 10,264,457 total letters Query= NC_005179.1 Length=134721 Score E Sequences producing significant alignments: (Bits) Value seq1 136 3e-27 >seq1 Length=762788 Score = 136 bits (150), Expect = 3e-27 Identities = 464/712 (65%), Gaps = 16/712 (2%) Strand=Plus/Plus Query 12875 ACTCTTTTTTCAAAAAAGTTTGTTTTTCCTTCTAACGAAATATTTTCCATAAAATCGAAA 12934 ||||| ||||| || ||||| || || || | || ||||| ||||||||||||||||| Sbjct 618940 ACTCTCTTTTCGAAGAAGTTGGTCTTACCAGCCAAAGAAATGTTTTCCATAAAATCGAAT 618999 Query 12935 GGATTTTTCGAACAAT--AGTATTTTTTACACCCTAATTCTAGTAACAATCTGTCAGCAA 12992 || || | ||| | | || |||| | || | | | || || |||||| |||| Sbjct 619000 GGGTTCGT--AACGTTGAAATACTTTTGATTGCCAAGAGCAACTAGCAGTCTGTCGGCAA 619057 Query 12993 CAAACTCTATGTACTGTTTCATTAAATCACAGTTCATTCCTATTAATTTTACAGGCATAG 13052 |||| || | || || ||||||| || |||||| || | || || || | | Sbjct 619058 CAAATTCAACATATTGGTTCATTAGGTCGGCGTTCATACCAAGTAGGGACACTGGTAGGG 619117 Query 13053 CTTCTGTTAAAAAGtttttttCTATATCAACTGCTTCGATAACTATGTCTCTTATTACGT 13112 | || | ||| | | ||||| || || || || || ||| || ||||| | || Sbjct 619118 CATCGATGAAATATCTCTTTTCGATTTCGACAGCCTCAGTAATGAT-TCTCTCA--ACAA 619174 Query 13113 TCTCTAATGGAGGATT--TGATAGA-TGCTTAAACATCATACATGCAAAATCACAGTGCA 13169 ||| | ||| || | | | ||| ||| | | ||||||||||||| ||| | Sbjct 619175 TCTTTGGATCAGGCTTGTTCTTCAAGTGCGCAAATAGAAGACATGCAAAATCAGTGTGAA 619234 Query 13170 ATCCTTCATCTCTACTTATTAGCTCGTTTGAAAATGTTAGACCCGGCATAAGCCCTCGTT 13229 || || ||||| | |||||||| || || || |||||||| ||||| | ||| | Sbjct 619235 GACCCTCGTCTCTGCAAATTAGCTCATTAGAGAACGTTAGACCGGGCATCAAACCTTTCT 619294 Query 13230 TTTTAATCCAAAATATAGCAGCAAACGAACCCGaaaaaaaTATTCCTTCAACTGCTGCAA 13289 | || | ||| || ||||| ||||| || || || || || | ||||| || || |||| Sbjct 619295 TCTTTAGCCAGAAAATAGCGGCAAAGGATCCGGAGAAGAAAACACCTTCCACGGCAGCAA 619354 Query 13290 ACGCTATCAACCTTTCACC--ATACGTACTATTTTTACTCTCTATCCACTTTCTGGCCCA 13347 | || | ||| || || | ||| | || || | || ||||| | ||||||| Sbjct 619355 AGGCGACCAATCTCTCTGCAAATAGGGCCTCTTCGT--CCTGGATCCATCTGATGGCCCA 619412 Query 13348 GTTTG-CTTTTTGTTTAACGCAGTTCATATTTTCTATTGCGTTAAATAAATAAttttttt 13406 | | ||| | || | | || |||||||| || || || |||| ||| | | Sbjct 619413 TTCGGCCTTCTCCTTGATCTGAG-GAATATTTTCAATGGCATTGAATAGGAAATCGCTCT 619471 Query 13407 CCTTACTGTCTAAAATATAAGTATCTATCAATAAGCTATACATTTCTGAATGAATATTTT 13466 |||| |||| || || || || |||| | || | || || || || |||| Sbjct 619472 CCTTGGGGTCTTTGATGTAGGTGTCAATCAGCAGAGAGTAGGTCTCGGAGTGGATGTTTT 619531 Query 13467 CCATCGCTATTTGGAAACCATAAAAACATCTAGCCTCTGATACCTGAACTTCGGAGTAAA 13526 ||||| || ||||| || ||||| || | || |||| | |||||||||| | | Sbjct 619532 CCATCATGATCTGGAACCCGTAAAAGCACTTGGCTTCTGGGATTTGAACTTCGGCTGAGA 619591 Query 13527 ATCTTTCTGCTAAGTTTTCGTTAACTATCCCGTCACTAGCAGCaaaaaaaGC 13578 | | || | ||||| ||||| || || ||||| |||||||| || || Sbjct 619592 AGTTCTCGACCAAGTTCTCGTTGACAATACCGTCGGACGCAGCAAAGAATGC 619643 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430982357979216