Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lachancea_20fermentati_20[genbank_20GCA_5F900074765.1_202016-10-26]
8 sequences; 10,264,457 total letters
Query= NC_006966.1
Length=166259
Score E
Sequences producing significant alignments: (Bits) Value
seq1 111 2e-19
>seq1
Length=762788
Score = 111 bits (122), Expect = 2e-19
Identities = 294/444 (66%), Gaps = 4/444 (1%)
Strand=Plus/Plus
Query 21185 TTTTGATAATCACTAACTCTTTTTTCGAAAAAATTTGTCTTTCCTTCCAATGATATAGAT 21244
||||| || ||| ||||| |||||||| || || ||||| || |||| || || |
Sbjct 618925 TTTTGGTAGTCAGACACTCTCTTTTCGAAGAAGTTGGTCTTACCAGCCAAAGAAATGTTT 618984
Query 21245 TCCATAAAATCAAATGGATTT-TCAGATTTAAATATTTTATTACAACCCAGTTCTGATAA 21303
||||||||||| ||||| || | | || ||||| ||| | | || || | ||
Sbjct 618985 TCCATAAAATCGAATGGGTTCGTAACGTTGAAATACTTT-TGATTGCCAAGAGCAACTAG 619043
Query 21304 TAATCTATCTGCTACAAATTCTATATATTGACACATTAATTCACAATTCATACCGATCAA 21363
| ||| || || |||||||| | |||||| ||||| || |||||||| | |
Sbjct 619044 CAGTCTGTCGGCAACAAATTCAACATATTGGTTCATTAGGTCGGCGTTCATACCAAGTAG 619103
Query 21364 TTTTACAGGAAGAGCTTTTGTCAAAAAAGATTTTTCTATAGAGACGGCTTCAACAATTAT 21423
|| || || || | | ||| | ||||| || ||| || ||| ||| ||
Sbjct 619104 GGACACTGGTAGGGCATCGATGAAATATCTCTTTTCGATTTCGACAGCCTCAGTAATGAT 619163
Query 21424 ATTTATTATCC-TAGATGTACTAGGGGGATACAATAATTGTTTAAACATCAAACATGCAA 21482
| | | | | | || | ||| | | || || ||| | | ||||||||
Sbjct 619164 -TCTCTCAACAATCTTTGGATCAGGCTTGTTCTTCAAGTGCGCAAATAGAAGACATGCAA 619222
Query 21483 AATCACAATGCAAACCTTCATCCCTACTTATTAATTCATTAGAAAATGTTAAACCGGGCA 21542
||||| || | ||| || || || | |||| |||||||| || |||| ||||||||
Sbjct 619223 AATCAGTGTGAAGACCCTCGTCTCTGCAAATTAGCTCATTAGAGAACGTTAGACCGGGCA 619282
Query 21543 TTAATCCTCTCTTTTTTAACCAAAATATTGACGCAAATGCTCCTGAAAAGAAAATGCCCT 21602
| || ||| |||| |||| ||| || || | ||||| | ||| || ||||||| || |
Sbjct 619283 TCAAACCTTTCTTCTTTAGCCAGAAAATAGCGGCAAAGGATCCGGAGAAGAAAACACCTT 619342
Query 21603 CAACGGCAGCAAATGCAACTAATC 21626
| ||||||||||| || || ||||
Sbjct 619343 CCACGGCAGCAAAGGCGACCAATC 619366
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 531900746809920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |