Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lachancea_20fermentati_20[genbank_20GCA_5F900074765.1_202016-10-26]
8 sequences; 10,264,457 total letters
Query= NC_006998.1
Length=194711
Score E
Sequences producing significant alignments: (Bits) Value
seq2 248 1e-60
seq1 152 6e-32
seq7 125 9e-24
>seq2
Length=1086951
Score = 248 bits (274), Expect = 1e-60
Identities = 703/1069 (66%), Gaps = 12/1069 (1%)
Strand=Plus/Plus
Query 62968 ACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAA 63027
||||||| || || | || | ||| ||| |||| ||||||| | ||| || |||| |
Sbjct 390273 ACTTGATGGTACCAAGGTTCTTTTGGTTAGACTTTCTGTTACAAGAATCTTTGTAAATCA 390332
Query 63028 TGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGA-CGACTCGAGCC 63086
||||||||||||| ||||| |||||| ||||| ||| || | ||| | | || ||||
Sbjct 390333 TGAATGGAGTACCGGTTTCCGTCTGAGCTTCTAGAATGGCATACCATAGCTTCT-GAGCT 390391
Query 63087 TTTATTATAGATTTGTATCTCCTTTCTCTT--TCGTATAGTGTATACAATCGTTCGAACT 63144
|| || | ||| || | | ||||| |||| || ||| || |||||| |
Sbjct 390392 TTGATAGT--CTTTCTACCACGGCCCTCTTGCACGTAACGTTCATATAAAGCTTCGAATT 390449
Query 63145 CGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGACCACTCTC 63204
| || || | |||| | | | || ||| |||| || | | ||| | ||| || |
Sbjct 390450 CATCACCATAGACATCGGCAAGACCGGGAGCTTCACTAGGGGAAAACAAGGTCCATTCAC 390509
Query 63205 CGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTC 63264
||| || | |||| ||||| || | ||| |||| ||| ||||| || | |||||
Sbjct 390510 CGTTCTCTTGAACTCTCTTCATGAACAAATCTGGAACCCATAGAGCAGGGAACAAATCTC 390569
Query 63265 TGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGA--TCGAGGAACGCCATAATATC 63322
||| | ||| || || || || | |||| || |||| || | | |||||
Sbjct 390570 TGGCACGGATTTCTTCCTTACC-GTGGT-TTTTCCGGATGTCGACAAAGTCGAAGATATC 390627
Query 63323 AGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATC 63382
||| ||||| ||||| ||||| || || | | | || || | ||||| || || |||||
Sbjct 390628 AGAGTGCCATGGTTCTAAGTAAATTGCAAAAGCACCTGGTCTCTTGTTGCCACCTTGATC 390687
Query 63383 TATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGATATACC 63442
| ||| | ||| ||||| || || || | | ||| || |||||||| || || ||||
Sbjct 390688 AACGTAACGAGCAGTGTTGTTGTATACACGAACCATGGGGATAATACCATTCGAAGTACC 390747
Query 63443 ATTGGTACCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATTCC 63502
|||||||| | || ||| || | | |||||| || || | || || ||
Sbjct 390748 GTTGGTACCTGCAATGTAGGAGCCTGTAGAACGAATGTTGTGGATGTGCAATCCGATACC 390807
Query 63503 CCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATACCCTCTATGCT 63562
|| || | || ||||| | || ||| ||| || || || |||||||| || |||
Sbjct 390808 GCCCGCAGTCTTGGAGATCATGGCACATTCTTTCAAAGTATCGTAGATACCTTCGATGGA 390867
Query 63563 ATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATT 63622
|| || ||||| | || |||||| |||||| || || || ||| || || ||
Sbjct 390868 GTCCTCTTTCATGGCTACCAGGAAACAGGAAGACATCTGAGGATGAGGAGTACCGGCGTT 390927
Query 63623 AAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAAT 63682
||||| || || || ||||| || || || || ||| | |||||||| || || |
Sbjct 390928 GAATAACGTGGGCGATGCGTGAGTGAAATATCTTAGAGACATGAGATTGTAGGTTTCGAG 390987
Query 63683 AGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGG 63742
|| || || || | || || || || || |||||||| | || ||||||||
Sbjct 390988 CACTCTTTCGATGTCGCGGCCGTGGATACCGACGGCAACACGCATGATCAAATGCTGAGG 391047
Query 63743 TCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACC 63802
| ||| ||| || | || | ||||| || ||| | || || |||||
Sbjct 391048 ACGTTCTGCGACTTTACCATCGATACGGAGTAAGTACGAACGTTCTAGGGTCTTGAAACC 391107
Query 63803 AAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATA 63862
||||||||||||| ||||||| ||||| | |||| | |||||||| | ||| || |
Sbjct 391108 AAAATAGTTGTATTGGAAGTCTCTGTCGTAGACAATAGCAGAGTTGAGCTCATCTTTGTG 391167
Query 63863 TTTGTTAACTATATCCATGGTGATACTT-GAAATAATCGGAGAATGTTTCCCATTTTTAG 63921
| | || || ||| | | ||| ||||| || || || || | ||||||||||
Sbjct 391168 CTCCATGACAAT-TCCGTAAACTTCCTTGGAAATCATGGGCGAGTGAATTCCATTTTTAG 391226
Query 63922 GATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCCTTGT 63981
| || ||||||| | | ||||| || ||| | ||| | || | |||| ||| |
Sbjct 391227 GGTTCACATAGTGGTACAAATCGCTCACCACCTGCGAAAACTGCTTGGTAGTTTGCTTAT 391286
Query 63982 GTAGATTTGATACGGCTATTCTGGCGGCTAGAATGGCATAATCCGGATG 64030
| || || || | || | ||| ||||||| | ||||| || || ||
Sbjct 391287 GCAGGTTGGAAATCGCAAGTCTAGCGGCTAACGTCGCATAGTCAGGGTG 391335
>seq1
Length=762788
Score = 152 bits (168), Expect = 6e-32
Identities = 483/732 (66%), Gaps = 15/732 (2%)
Strand=Plus/Plus
Query 33013 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTT 33072
|||||||| ||| ||| | |||||||| || || || || || |||| || || |||
Sbjct 618925 TTTTGGTAGTCAGACACTCTCTTTTCGAAGAAGTTGGTCTTACCAGCCAAAGAAATGTTT 618984
Query 33073 TCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATT-CAGAAAT 33131
||||| ||||| || || || ||||| || |||| |||| | | |||| || |
Sbjct 618985 TCCATAAAATCGAATGGGTTCGTAACGTTG-AAATACTTTTGATTGCCAAGAGCAACTAG 619043
Query 33132 CAATCTATCCGCGACGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAG 33191
|| ||| || || || ||||| | |||| ||||| | || ||||| || | ||
Sbjct 619044 CAGTCTGTCGGCAACAAATTCAACATATTGGTTCATTAGGTCGGCGTTCATACCAAGTAG 619103
Query 33192 TTTAACTGGAAGAGCCGCAGTAAGAAAT-TCTTGTTCAATGGATACCGCATCTGTTATAA 33250
||||| || || | | | | || |||| ||| || || || || || || |
Sbjct 619104 GGACACTGGTAGGGCATCGATGAAATATCTCTT-TTCGATTTCGACAGCCTCAGTAATGA 619162
Query 33251 TAGATCT-AACGGTTTCTTCACTCGGTGGATGCAATAAATGTTTAAACATCAAACATGCG 33309
| ||| ||| | | | | || | | || || ||| | | ||||||
Sbjct 619163 TTC-TCTCAACAATCTTTGGATCAGGCTTGTTCTTCAAGTGCGCAAATAGAAGACATGCA 619221
Query 33310 AAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGC 33369
||||| ||| |||||||||||||| | |||||| || || || ||||| || ||||||
Sbjct 619222 AAATCAGTGTGAAGACCCTCGTCTCTGCAAATTAGCTCATTAGAGAACGTTAGACCGGGC 619281
Query 33370 ATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGATTCCT 33429
|| | || ||| || ||||| || || | || || ||||| || ||||| | |||
Sbjct 619282 ATCAAACCTTTCTTCTTTAGCCAGAAAATAGCGGCAAAGGATCCGGAGAAGAAAACACCT 619341
Query 33430 TCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATA-ACCGGCGCT--GTCATGTATCCA- 33485
|| || ||||||||||| | | ||||||| || | | | | || ||| || |||||
Sbjct 619342 TCCACGGCAGCAAAGGCGACCAATCTCTCTGCAAATAGGGCCTCTTCGTCCTGGATCCAT 619401
Query 33486 CTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAG 33545
|| || ||||| |||||||||| || | ||| || |||| |||||||| || ||
Sbjct 619402 CTGATG-GCCCATTCGGCCTTCTCCTTGATCTGAGGAATATTTTCAATGGCATTGAATAG 619460
Query 33546 ATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGA 33605
| | | || || ||||| | || || || |||| ||| || | || ||
Sbjct 619461 GAAATCGCTCTCCTTGGGGTCTTTGATGTAGGTGTCAATCAGCAGAGAGTAGGTCTCGGA 619520
Query 33606 ATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTAC 33665
|| |||||||| || ||||| || ||||| || || | || || | || || ||
Sbjct 619521 GTGGATGTTTTCCATCATGATCTGGAACCCGTAAAAGCACTTGGCTTCTGGGATTTGAAC 619580
Query 33666 TTCTGTACAAAATCGTTC-CG-CCAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAA 33723
||| | | || |||| || |||| || || || || || ||||| || |||||
Sbjct 619581 TTCGGCTGAGAA--GTTCTCGACCAAGTTCTCGTTGACAATACCGTCGGACGCAGCAAAG 619638
Query 33724 AACGCCAATACA 33735
|| ||||| |||
Sbjct 619639 AATGCCAACACA 619650
>seq7
Length=1626734
Score = 125 bits (138), Expect = 9e-24
Identities = 545/845 (64%), Gaps = 34/845 (4%)
Strand=Plus/Plus
Query 62637 TAAATGGTTTCGAAGATCTTCTTATTTAGATCTTG-TGCTTCCAGGCTATCAAATGGATA 62695
||||| || |||||||| | ||||| || | | | ||| || | || ||||||
Sbjct 861460 TAAATCGTCTCGAAGATTTGTTTATTGAG-TATCGATGCCTCTATAGATTCGAATGGAAT 861518
Query 62696 ATTTAAGAGAATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCT 62755
|| || | || ||| || ||||||||||| |||||||| | | |||||||| |||
Sbjct 861519 CTTCAAAATCATGAACAAATCAGCTAATCCTTGCACACCAATTGCCAAAGGTCTATTTCT 861578
Query 62756 CTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAG 62815
| | || | |||||||||| || |||||| | | |||||| || | | |
Sbjct 861579 CATGTTGCTGTATTCAGCTTCTTCAACAGGATAGTCACAAATATCAATGACAAGGTCCAA 861638
Query 62816 ATTTCTGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAA--TCGC------ 62867
|||||| || | || || |||| | || | |||||||| | ||
Sbjct 861639 ATTTCTCGTAACAAGCTTTACAACATGGTGGAGCATCTTGAAATCAAACTTTGCTACTGT 861698
Query 62868 -CCATCTATT---ACAAACATGTTCAAGGCAACAGATGCCAGATTACAAACGGCTACCTC 62923
|| || || ||||| | | ||||| ||||| ||||| || || |||| |||
Sbjct 861699 ACCTTCGATCTTCACAAAACTAGGGAGAGCAACTGATGCAAGATTGCACACAGCTATCTC 861758
Query 62924 ATTAGCATCCGCA-TATTGTATTATCTCAGTGCAAAGATTACTACACTTGATAGTTCCTA 62982
|| | | || ||||| | ||||| ||| || || |||| ||||| || |
Sbjct 861759 ATCTGG-TGAGCTGTATTGAACAATCTCGCAGCAGAGGTTGGATGACTTAATAGTACCGA 861817
Query 62983 AATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAG 63042
|||| |||||| ||||| || || | ||||||||| || ||||| ||| || |
Sbjct 861818 GGTTTTTTTGATTTGATTTTTTATTGCAGGAATCCTTATATAGCATGAAAGGACCGCCGG 861877
Query 63043 TTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATA--GATTT 63100
| |||| ||| || || ||| | |||| | | | ||||| | | | ||
Sbjct 861878 TCTCAACTTGACTTTGTAAAATTTCGCTCCAAAGCTCCTGCGCCTTAACTGTCTTGACCG 861937
Query 63101 GTATCTCCTTTCTCTTTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCA--AACA 63158
||||| |||| || | || | ||| |||| ||||||||| || || | ||
Sbjct 861938 GTATCAACTTTTGCT--CATAAGATTCATATAATCTTTCGAACTCTTCACCGTAGCAATC 861995
Query 63159 TTGTCCAATCCAGGACATTCATCCGGACACATCAACGAC--CACTCTCCGTCATCCTTCA 63216
|||| || ||||| ||| ||||| | | || ||| || ||| | | || || |
Sbjct 861996 TTGT--AAACCAGGTGCTTCGTCCGGGGAAA--AAAGACTCCAGTCTTCATTATTCTCAA 862051
Query 63217 CTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-AATAGATCTCTGGTTCTATGT 63275
| || |||||||| | ||||||||||| ||||| ||| || ||||| | | ||| |
Sbjct 862052 CGCGCTTCATAAATAAGTCAGGAATCCAGAGAGC-ATAGAAAAGATCCCGTGCTCTCAAT 862110
Query 63276 TCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGT 63335
|| || ||||| ||||| ||| | | || | | ||| ||| ||||||| ||
Sbjct 862111 TCTTCTTTTCCATGGTTCTTCCGAAGTTGTAAAAAGTCAAAAATGTCACAATGCCAAGGC 862170
Query 63336 TCCAAGTATATGGCCATAA--CTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAG 63393
|| | ||||||| || || | || |||| || || || || ||||| | ||| | ||
Sbjct 862171 TCTAGGTATATG--CAAAAGGCACCCGGCCTCTTATTCCCACCTTGATCAACGTAGCGAG 862228
Query 63394 CGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGATATACCATTGGTACCGG 63453
| ||||| || |||| | | ||| |||| | ||| || || | ||||| | ||| |
Sbjct 862229 CTGTGTTGTTGAAAACACGTAGCATAGGAACCAGACCATTCGAAGTGCCATTTGAACCTG 862288
Query 63454 AGATA 63458
| |||
Sbjct 862289 AAATA 862293
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 622947137705280
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