Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lachancea_20fermentati_20[genbank_20GCA_5F900074765.1_202016-10-26]
8 sequences; 10,264,457 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq2 224 3e-53
seq1 149 2e-30
seq7 131 4e-25
>seq2
Length=1086951
Score = 224 bits (248), Expect = 3e-53
Identities = 584/883 (66%), Gaps = 22/883 (2%)
Strand=Plus/Minus
Query 363427 CGTATCAATGGTGATATTGTTGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGT 363486
|||||| ||||| | | | ||||| || |||||| || | ||||||||||| | |||
Sbjct 391074 CGTATCGATGGTAAAGTCGCAGAACGTCCTCAGCATTTGATCATGCGTGTTGCCGTCGGT 391015
Query 363487 ATCCATTGCCCGGATGTTGATGCCGCGATTGAAACATATAAGCT------TCTAAGTGCT 363540
||||| ||| || | || | | | ||||| || || || |||||| |
Sbjct 391014 ATCCACGGCCGCGACATCGAAAGAGTGCTCGAAACCTACAATCTCATGTCTCTAAGATAT 390955
Query 363541 CGTGTATTCACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATG 363600
||||| ||||| |||| || | | ||| || || |||| | |||| ||||||
Sbjct 390954 ------TTCACTCACGCATCGCCCACGTTATTCAACGCCGGTACTCCTCATCCTCAGATG 390901
Query 363601 TCTTCTTGCTTTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTT 363660
||||| || || || || ||||| || || |||||||| ||||||| || || |
Sbjct 390900 TCTTCCTGTTTCCTGGTAGCCATGAAAGAGGACTCCATCGAAGGTATCTACGATACTTTG 390841
Query 363661 AAGAATTGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTT 363720
|| | ||||| | || ||||||| ||| ||||| || || | |||||||| ||
Sbjct 390840 AAAGAATGTGCCATGATCTCCAAGACTGCGGGCGGTATCGGATTGCACATCCACAACATT 390781
Query 363721 CGTGC-ACAGAACAGTTACATTCGCGGCACAGGGGGATAC-TCGAATGGGCTGGTTCCCA 363778
||| | |||| | |||||| || || || ||| |||||||| | | ||||
Sbjct 390780 CGTTCTACAG-GCTCCTACATTGCAGGTACCAACGG-TACTTCGAATGGTATTATCCCCA 390723
Query 363779 TGCTTCGTGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAG 363838
|| ||||||| | |||| ||||| | ||||| || || ||||| ||| | ||
Sbjct 390722 TGGTTCGTGTATACAACAACACTGCTCGTTACGTTGATCAAGGTGGCAACAAGAGACCAG 390663
Query 363839 GGGCGTTTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCC 363898
| || ||||| || || | || || || | ||||| || || ||| | || |||
Sbjct 390662 GTGCTTTTGCAATTTACTTAGAACCATGGCACTCTGATATCTTCGACTTTGTCGACATCC 390603
Query 363899 GGAAAAACACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTT 363958
|||||||| || || || ||| | ||||| | ||| ||||| ||| || ||||||
Sbjct 390602 GGAAAAACCACGGTAAGGAAGAAATCCGTGCCAGAGATTTGTTCCCTGCTCTATGGGTTC 390543
Query 363959 CTGACCATTTTATGAAGCGCGT---GGAGGCAGGTAAGAATTGGTCACTCTTTTGCCCAC 364015
| || || |||||| | || ||| ||| ||| ||| | | |||| |||
Sbjct 390542 CAGATTTGTTCATGAAGAGAGTTCAAGAGAACGGT--GAA-TGGACCTTGTTTTCCCCTA 390486
Query 364016 ACGAATGTCCAGGTCTTTCCGATGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGT 364075
||| ||| |||||| ||||||| | ||||| || | | ||| |||| ||| |
Sbjct 390485 GTGAAGCTCCCGGTCTTGCCGATGTCTATGGTGATGAATTCGAAGCTTTATATGAACGTT 390426
Query 364076 ATGAATCGGAGGGAAAGGCTCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCA 364135
| | ||||| | | | ||||| || || ||||||||||||| ||||||
Sbjct 390425 ACGTGCAAGAGGGCCGTGGTAGAAAGACTATCAAAGCTCAGAAGCTATGGTATGCCATTC 390366
Query 364136 TGGATTCGCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCA 364195
| || | |||| || || || || || | ||| | ||||||||||| || ||| | |
Sbjct 390365 TAGAAGCTCAGACGGAAACCGGTACTCCATTCATGATTTACAAAGATTCTTGTAACAGAA 390306
Query 364196 AGTCCAACCAGCAGCACCTTGGTACAATTCAGCAGAGCAACCTATGTACCGAGATTATTG 364255
|||| ||||| || |||||||||| || || ||| | ||| || || | |
Sbjct 390305 AGTCTAACCAAAAGAACCTTGGTACCATCAAGTCTTCTAACTTGTGTTGTGAAATCGTCG 390246
Query 364256 AATACACCGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTC 364298
| ||| | | || || || |||||||| |||||| | || ||
Sbjct 390245 AGTACTCTTCCCCAGAGGAAACTGCCGTGTGTAACTTGGCTTC 390203
>seq1
Length=762788
Score = 149 bits (164), Expect = 2e-30
Identities = 489/749 (65%), Gaps = 32/749 (4%)
Strand=Plus/Minus
Query 22219 GCATTCTTTGCTACCGCAGACGGTATAGTTTTTGAGAATCTAGTGACTAATTTTGCATCT 22278
|||||||||||| | | |||||||| || ||||| | || || || || |
Sbjct 619643 GCATTCTTTGCTGCGTCCGACGGTATTGTCAACGAGAACTTGGTCGAGAACTTCTCAGCC 619584
Query 22279 GAAATTCAATACCCAGAGGCCAGATGTTTCTATGGTGTGCAAATGATGATTGAAAATGTT 22338
||| ||||| |||||| |||| || || || || | || || ||||| ||||| |
Sbjct 619583 GAAGTTCAAATCCCAGAAGCCAAGTGCTTTTACGGGTTCCAGATCATGATGGAAAACATC 619524
Query 22339 CACGCGGAAACATATTCTATGATGCTACAGTCACTCGTAGAAGATAAAGAC-----GAAC 22393
||| | || || || ||| || || | | || | || | | ||||| | |
Sbjct 619523 CACTCCGAGACCTACTCTCTGCTGAT----TGACACCTACATCA--AAGACCCCAAGGAG 619470
Query 22394 AACGAAA-CTTATTCCGCGCGATTCGCACCATTCAATCA-ATTAAGAATAAGGCAGATTG 22451
| ||| | ||||| || ||| | |||| ||| || ||| | ||||| || ||
Sbjct 619469 AGCGATTTCCTATTCAATGCCATTGAAAATATTCC-TCAGATCAAGGAGAAGGCCGAATG 619411
Query 22452 GGCGCTGAAATGGATGAACAATGAACGTTC---ATTCGCGGAACGTCTTATTGCATTTGC 22508
||| | | |||||| | | ||| | ||| || || | | | || |||||
Sbjct 619410 GGCCATCAGATGGATCCAGGACGAAGAGGCCCTATTTGCAGAGAGATTGGTCGCCTTTGC 619351
Query 22509 TGTGGTTGAAGGCATTTTCTTTTCTGGAGCATTTTGTGCAATCTTTTGGCTaaaaaaaCG 22568
|| || ||||| ||||||| || ||| | ||| || || || |||||||| ||
Sbjct 619350 TGCCGTGGAAGGTGTTTTCTTCTCCGGATCCTTTGCCGCTATTTTCTGGCTAAAGAAGAA 619291
Query 22569 TGCAATTATGCCGGGTCTAACGTTTTCAAATGAGTTAATTAGCCGAGATGAGGGTCTTCA 22628
| | ||||| ||||||||||| || |||||| ||||| || |||| |||||||||||
Sbjct 619290 AGGTTTGATGCCCGGTCTAACGTTCTCTAATGAGCTAATTTGCAGAGACGAGGGTCTTCA 619231
Query 22629 TACCGATTTTGCGTGTATGCTATAT-CGGAAT--CATATCATTCATAAACTTCCATATGA 22685
|| |||||||| ||| | |||| | || | | | | || | | | |||| | ||
Sbjct 619230 CACTGATTTTGCATGTCTTCTATTTGCGCACTTGAAGAACAAGCCTGA---TCCA-AAGA 619175
Query 22686 AACTGTACTTGA---TATTATTACAAATGCAGTTGAACTTGAACGTCTATTTATTTGCGA 22742
| |||| || ||||| | || || ||| | ||| || | | |||
Sbjct 619174 -----TTGTTGAGAGAATCATTACTGAGGCTGTCGAAATCGAAAAGAGATATTTCATCGA 619120
Query 22743 GGCGTTACCAGTAAGTCTCATTGGTATCAATGCCGAATCAATGAGTACATATATTAAATT 22802
|| ||||||| || ||||||| || ||||| ||||| |||| || ||||
Sbjct 619119 TGCCCTACCAGTGTCCCTACTTGGTATGAACGCCGACCTAATGAACCAATATGTTGAATT 619060
Query 22803 TGTTGCAGATCGTCTATTAATTTCACTCGGTTATGCAAAGCATTATAACGTCGTTAATCC 22862
|||||| || | || || || | || || || |||| ||| ||||| || ||
Sbjct 619059 TGTTGCCGACAGACTGCTAGTTGCTCTTGGCAATCAAAAGTATTTCAACGTTACGAACCC 619000
Query 22863 ATTTGAATGGATGGAACTTATTTCACTTGAAGGAAAGACCAATTTCTTCGAAAAAAGAGT 22922
||| || | |||||| ||||| | | || |||||||| ||||||||||| |||||
Sbjct 618999 ATTCGATTTTATGGAAAACATTTCTTTGGCTGGTAAGACCAACTTCTTCGAAAAGAGAGT 618940
Query 22923 TGGTGAATACCAAAAAGCAGGTGTTATGG 22951
||| |||||||| |||||||| ||||
Sbjct 618939 GTCTGACTACCAAAAGGCAGGTGTCATGG 618911
>seq7
Length=1626734
Score = 131 bits (144), Expect = 4e-25
Identities = 164/225 (73%), Gaps = 0/225 (0%)
Strand=Plus/Minus
Query 363760 TCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGCGAGGTACGTCGACCAG 363819
|||||||| |||||||| ||||| ||||| || |||| || || | ||||| || ||
Sbjct 862271 TCGAATGGTCTGGTTCCTATGCTACGTGTTTTCAACAACACAGCTCGCTACGTTGATCAA 862212
Query 363820 GGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCCTCATCATGCCGATATT 363879
||||| ||| | || || ||| || || || |||||| ||| || |||
Sbjct 862211 GGTGGGAATAAGAGGCCGGGTGCCTTTTGCATATACCTAGAGCCTTGGCATTGTGACATT 862152
Query 363880 TTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGAATTGCGTGCACGTGATCTG 363939
||||| ||| | | || ||||| ||| |||||||| |||||| | ||||| |||||
Sbjct 862151 TTTGACTTTTTACAACTTCGGAAGAACCATGGAAAAGAAGAATTGAGAGCACGGGATCTT 862092
Query 363940 TTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGGAG 363984
|||||||| || ||| || ||||| |||||||||||||| |||
Sbjct 862091 TTCTATGCTCTCTGGATTCCTGACTTATTTATGAAGCGCGTTGAG 862047
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1303353466406256
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |