Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lachancea_20fermentati_20[genbank_20GCA_5F900074765.1_202016-10-26] 8 sequences; 10,264,457 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq2 224 3e-53 seq1 149 2e-30 seq7 131 4e-25 >seq2 Length=1086951 Score = 224 bits (248), Expect = 3e-53 Identities = 584/883 (66%), Gaps = 22/883 (2%) Strand=Plus/Minus Query 363427 CGTATCAATGGTGATATTGTTGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGT 363486 |||||| ||||| | | | ||||| || |||||| || | ||||||||||| | ||| Sbjct 391074 CGTATCGATGGTAAAGTCGCAGAACGTCCTCAGCATTTGATCATGCGTGTTGCCGTCGGT 391015 Query 363487 ATCCATTGCCCGGATGTTGATGCCGCGATTGAAACATATAAGCT------TCTAAGTGCT 363540 ||||| ||| || | || | | | ||||| || || || |||||| | Sbjct 391014 ATCCACGGCCGCGACATCGAAAGAGTGCTCGAAACCTACAATCTCATGTCTCTAAGATAT 390955 Query 363541 CGTGTATTCACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATG 363600 ||||| ||||| |||| || | | ||| || || |||| | |||| |||||| Sbjct 390954 ------TTCACTCACGCATCGCCCACGTTATTCAACGCCGGTACTCCTCATCCTCAGATG 390901 Query 363601 TCTTCTTGCTTTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTT 363660 ||||| || || || || ||||| || || |||||||| ||||||| || || | Sbjct 390900 TCTTCCTGTTTCCTGGTAGCCATGAAAGAGGACTCCATCGAAGGTATCTACGATACTTTG 390841 Query 363661 AAGAATTGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTT 363720 || | ||||| | || ||||||| ||| ||||| || || | |||||||| || Sbjct 390840 AAAGAATGTGCCATGATCTCCAAGACTGCGGGCGGTATCGGATTGCACATCCACAACATT 390781 Query 363721 CGTGC-ACAGAACAGTTACATTCGCGGCACAGGGGGATAC-TCGAATGGGCTGGTTCCCA 363778 ||| | |||| | |||||| || || || ||| |||||||| | | |||| Sbjct 390780 CGTTCTACAG-GCTCCTACATTGCAGGTACCAACGG-TACTTCGAATGGTATTATCCCCA 390723 Query 363779 TGCTTCGTGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAG 363838 || ||||||| | |||| ||||| | ||||| || || ||||| ||| | || Sbjct 390722 TGGTTCGTGTATACAACAACACTGCTCGTTACGTTGATCAAGGTGGCAACAAGAGACCAG 390663 Query 363839 GGGCGTTTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCC 363898 | || ||||| || || | || || || | ||||| || || ||| | || ||| Sbjct 390662 GTGCTTTTGCAATTTACTTAGAACCATGGCACTCTGATATCTTCGACTTTGTCGACATCC 390603 Query 363899 GGAAAAACACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTT 363958 |||||||| || || || ||| | ||||| | ||| ||||| ||| || |||||| Sbjct 390602 GGAAAAACCACGGTAAGGAAGAAATCCGTGCCAGAGATTTGTTCCCTGCTCTATGGGTTC 390543 Query 363959 CTGACCATTTTATGAAGCGCGT---GGAGGCAGGTAAGAATTGGTCACTCTTTTGCCCAC 364015 | || || |||||| | || ||| ||| ||| ||| | | |||| ||| Sbjct 390542 CAGATTTGTTCATGAAGAGAGTTCAAGAGAACGGT--GAA-TGGACCTTGTTTTCCCCTA 390486 Query 364016 ACGAATGTCCAGGTCTTTCCGATGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGT 364075 ||| ||| |||||| ||||||| | ||||| || | | ||| |||| ||| | Sbjct 390485 GTGAAGCTCCCGGTCTTGCCGATGTCTATGGTGATGAATTCGAAGCTTTATATGAACGTT 390426 Query 364076 ATGAATCGGAGGGAAAGGCTCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCA 364135 | | ||||| | | | ||||| || || ||||||||||||| |||||| Sbjct 390425 ACGTGCAAGAGGGCCGTGGTAGAAAGACTATCAAAGCTCAGAAGCTATGGTATGCCATTC 390366 Query 364136 TGGATTCGCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCA 364195 | || | |||| || || || || || | ||| | ||||||||||| || ||| | | Sbjct 390365 TAGAAGCTCAGACGGAAACCGGTACTCCATTCATGATTTACAAAGATTCTTGTAACAGAA 390306 Query 364196 AGTCCAACCAGCAGCACCTTGGTACAATTCAGCAGAGCAACCTATGTACCGAGATTATTG 364255 |||| ||||| || |||||||||| || || ||| | ||| || || | | Sbjct 390305 AGTCTAACCAAAAGAACCTTGGTACCATCAAGTCTTCTAACTTGTGTTGTGAAATCGTCG 390246 Query 364256 AATACACCGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTC 364298 | ||| | | || || || |||||||| |||||| | || || Sbjct 390245 AGTACTCTTCCCCAGAGGAAACTGCCGTGTGTAACTTGGCTTC 390203 >seq1 Length=762788 Score = 149 bits (164), Expect = 2e-30 Identities = 489/749 (65%), Gaps = 32/749 (4%) Strand=Plus/Minus Query 22219 GCATTCTTTGCTACCGCAGACGGTATAGTTTTTGAGAATCTAGTGACTAATTTTGCATCT 22278 |||||||||||| | | |||||||| || ||||| | || || || || | Sbjct 619643 GCATTCTTTGCTGCGTCCGACGGTATTGTCAACGAGAACTTGGTCGAGAACTTCTCAGCC 619584 Query 22279 GAAATTCAATACCCAGAGGCCAGATGTTTCTATGGTGTGCAAATGATGATTGAAAATGTT 22338 ||| ||||| |||||| |||| || || || || | || || ||||| ||||| | Sbjct 619583 GAAGTTCAAATCCCAGAAGCCAAGTGCTTTTACGGGTTCCAGATCATGATGGAAAACATC 619524 Query 22339 CACGCGGAAACATATTCTATGATGCTACAGTCACTCGTAGAAGATAAAGAC-----GAAC 22393 ||| | || || || ||| || || | | || | || | | ||||| | | Sbjct 619523 CACTCCGAGACCTACTCTCTGCTGAT----TGACACCTACATCA--AAGACCCCAAGGAG 619470 Query 22394 AACGAAA-CTTATTCCGCGCGATTCGCACCATTCAATCA-ATTAAGAATAAGGCAGATTG 22451 | ||| | ||||| || ||| | |||| ||| || ||| | ||||| || || Sbjct 619469 AGCGATTTCCTATTCAATGCCATTGAAAATATTCC-TCAGATCAAGGAGAAGGCCGAATG 619411 Query 22452 GGCGCTGAAATGGATGAACAATGAACGTTC---ATTCGCGGAACGTCTTATTGCATTTGC 22508 ||| | | |||||| | | ||| | ||| || || | | | || ||||| Sbjct 619410 GGCCATCAGATGGATCCAGGACGAAGAGGCCCTATTTGCAGAGAGATTGGTCGCCTTTGC 619351 Query 22509 TGTGGTTGAAGGCATTTTCTTTTCTGGAGCATTTTGTGCAATCTTTTGGCTaaaaaaaCG 22568 || || ||||| ||||||| || ||| | ||| || || || |||||||| || Sbjct 619350 TGCCGTGGAAGGTGTTTTCTTCTCCGGATCCTTTGCCGCTATTTTCTGGCTAAAGAAGAA 619291 Query 22569 TGCAATTATGCCGGGTCTAACGTTTTCAAATGAGTTAATTAGCCGAGATGAGGGTCTTCA 22628 | | ||||| ||||||||||| || |||||| ||||| || |||| ||||||||||| Sbjct 619290 AGGTTTGATGCCCGGTCTAACGTTCTCTAATGAGCTAATTTGCAGAGACGAGGGTCTTCA 619231 Query 22629 TACCGATTTTGCGTGTATGCTATAT-CGGAAT--CATATCATTCATAAACTTCCATATGA 22685 || |||||||| ||| | |||| | || | | | | || | | | |||| | || Sbjct 619230 CACTGATTTTGCATGTCTTCTATTTGCGCACTTGAAGAACAAGCCTGA---TCCA-AAGA 619175 Query 22686 AACTGTACTTGA---TATTATTACAAATGCAGTTGAACTTGAACGTCTATTTATTTGCGA 22742 | |||| || ||||| | || || ||| | ||| || | | ||| Sbjct 619174 -----TTGTTGAGAGAATCATTACTGAGGCTGTCGAAATCGAAAAGAGATATTTCATCGA 619120 Query 22743 GGCGTTACCAGTAAGTCTCATTGGTATCAATGCCGAATCAATGAGTACATATATTAAATT 22802 || ||||||| || ||||||| || ||||| ||||| |||| || |||| Sbjct 619119 TGCCCTACCAGTGTCCCTACTTGGTATGAACGCCGACCTAATGAACCAATATGTTGAATT 619060 Query 22803 TGTTGCAGATCGTCTATTAATTTCACTCGGTTATGCAAAGCATTATAACGTCGTTAATCC 22862 |||||| || | || || || | || || || |||| ||| ||||| || || Sbjct 619059 TGTTGCCGACAGACTGCTAGTTGCTCTTGGCAATCAAAAGTATTTCAACGTTACGAACCC 619000 Query 22863 ATTTGAATGGATGGAACTTATTTCACTTGAAGGAAAGACCAATTTCTTCGAAAAAAGAGT 22922 ||| || | |||||| ||||| | | || |||||||| ||||||||||| ||||| Sbjct 618999 ATTCGATTTTATGGAAAACATTTCTTTGGCTGGTAAGACCAACTTCTTCGAAAAGAGAGT 618940 Query 22923 TGGTGAATACCAAAAAGCAGGTGTTATGG 22951 ||| |||||||| |||||||| |||| Sbjct 618939 GTCTGACTACCAAAAGGCAGGTGTCATGG 618911 >seq7 Length=1626734 Score = 131 bits (144), Expect = 4e-25 Identities = 164/225 (73%), Gaps = 0/225 (0%) Strand=Plus/Minus Query 363760 TCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGCGAGGTACGTCGACCAG 363819 |||||||| |||||||| ||||| ||||| || |||| || || | ||||| || || Sbjct 862271 TCGAATGGTCTGGTTCCTATGCTACGTGTTTTCAACAACACAGCTCGCTACGTTGATCAA 862212 Query 363820 GGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCCTCATCATGCCGATATT 363879 ||||| ||| | || || ||| || || || |||||| ||| || ||| Sbjct 862211 GGTGGGAATAAGAGGCCGGGTGCCTTTTGCATATACCTAGAGCCTTGGCATTGTGACATT 862152 Query 363880 TTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGAATTGCGTGCACGTGATCTG 363939 ||||| ||| | | || ||||| ||| |||||||| |||||| | ||||| ||||| Sbjct 862151 TTTGACTTTTTACAACTTCGGAAGAACCATGGAAAAGAAGAATTGAGAGCACGGGATCTT 862092 Query 363940 TTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGGAG 363984 |||||||| || ||| || ||||| |||||||||||||| ||| Sbjct 862091 TTCTATGCTCTCTGGATTCCTGACTTATTTATGAAGCGCGTTGAG 862047 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303353466406256