Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lachancea_20fermentati_20[genbank_20GCA_5F900074765.1_202016-10-26] 8 sequences; 10,264,457 total letters Query= NC_007767.1 Length=132959 Score E Sequences producing significant alignments: (Bits) Value seq8 98.7 8e-16 seq4 93.3 4e-14 seq6 87.8 2e-12 >seq8 Length=1564113 Score = 98.7 bits (108), Expect = 8e-16 Identities = 162/231 (70%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 115283 AAAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCC 115342 || |||||||||||||| || || | || || || || |||||| | ||| ||||| Sbjct 561235 AAGATGCAAATTTTTGTTAAGACCTTAACCGGTAAGACAATTACCCTTGAAGTCGAGTCT 561176 Query 115343 AGCGACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGA 115401 |||||| | ||||| || || || || || || || || |||| ||| Sbjct 561175 TCTGACACT-ATCGACAATGTCAAGTCCAAGATCCAAGACAAGGAGGGTATCCCACCTGA 561117 Query 115402 TCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTA 115461 || |||||| | || | ||| || || ||||| ||||||| || ||| || | || || Sbjct 561116 CCAACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGCAGAACTTTGTCTGACTA 561057 Query 115462 TAACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 ||||| ||||| |||||||| | || |||| ||||||||| |||| || Sbjct 561056 CAACATCCAAAAGGAGTCTACCTTGCACTTGGTTTTGAGATTGAGAGGTGG 561006 >seq4 Length=1192607 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 ||||| || || ||||| || || || || || ||||| ||| | ||| || ||| Sbjct 498847 ATGCAGATCTTCGTCAAGACTCTAACCGGTAAGACCATCACCTTGGAAGTCGAATCCTCT 498906 Query 115346 GACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 || || | | |||| || ||| || || ||||| ||||| | || ||| || Sbjct 498907 GATACCATCG-ACAACGTTAAATCCAAGATCCAGGATAAGGAAGGTATTCCACCTGACCA 498965 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 ||||||||| |||| || || || || || || |||| || ||| | | || || || Sbjct 498966 GCAAAGACTGATTTTCGCTGGTAAGCAGTTGGAGGATGGCAGAACGCTTTCTGACTACAA 499025 Query 115465 CATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 ||| ||||| ||||||||| ||||| |||| |||||| | |||| || Sbjct 499026 CATCCAAAAGGAGTCTACTTTACATTTGGTTTTGAGACTAAGAGGTGG 499073 Score = 89.7 bits (98), Expect = 4e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 ||||| || || ||||| || || || || || || ||||| | || ||||| Sbjct 499303 ATGCAGATCTTCGTCAAGACTCTAACCGGTAAGACTATTACTTTGGAGGTTGAGTCTTCT 499362 Query 115346 GACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 ||||| | | ||||| || ||| || ||| || || ||||| | || || || Sbjct 499363 GACAC-GATAGACAACGTCAAATCCAAGATTCAAGACAAGGAAGGTATTCCACCAGACCA 499421 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 |||||| | |||| || || || ||||| || |||| || ||| | | || || || Sbjct 499422 ACAAAGATTGATTTTCGCCGGTAAGCAATTGGAGGATGGCAGAACGCTTTCTGACTACAA 499481 Query 115465 CATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 ||||||||| ||||||||| ||||| |||| |||||| | |||| || Sbjct 499482 CATTCAAAAGGAGTCTACTTTACATTTGGTTTTGAGACTAAGAGGTGG 499529 >seq6 Length=1504611 Score = 87.8 bits (96), Expect = 2e-12 Identities = 153/220 (70%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 115294 TTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGCGACACTGT 115353 |||||| || || | || || || |||||||| | ||| || || ||||| | Sbjct 86081 TTTTGTGAAGACCTTGACTGGTAAGACCATTACTTTGGAAGTCGAATCTTCAGACACCAT 86140 Query 115354 TGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAGCAAAGAC 115412 || |||| || || || ||| || || ||||| | || ||| || |||||| Sbjct 86141 TG-ACAACGTCAAGTCTAAGATTCAAGACAAGGAAGGTATTCCTCCTGACCAACAAAGAT 86199 Query 115413 TTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAACATTCAAA 115472 | || | ||| || || ||||| ||||||| || |||| || | || || |||||||||| Sbjct 86200 TGATCTTTGCTGGTAAGCAATTGGAAGATGGCAGAACCTTGTCTGACTACAACATTCAAA 86259 Query 115473 AAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 | || ||||| | || |||| ||||||||| |||| || Sbjct 86260 AGGAATCTACCTTGCACTTGGTTTTGAGATTGAGAGGTGG 86299 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425343958528960