Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lachancea_20fermentati_20[genbank_20GCA_5F900074765.1_202016-10-26] 8 sequences; 10,264,457 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq2 264 1e-65 seq1 158 2e-33 seq7 116 5e-21 >seq2 Length=1086951 Score = 264 bits (292), Expect = 1e-65 Identities = 1359/2144 (63%), Gaps = 60/2144 (3%) Strand=Plus/Plus Query 61846 CAATG-TGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTT 61904 ||||| | ||||| || | ||| || || | || || | | |||||||| || || | Sbjct 389274 CAATGGTAAATTGGATAGCAGCAGAGGCAGCTTGGGTCCTCAAGTAGTACATACCGGTCT 389333 Query 61905 TTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTG 61964 | | ||| ||||||||||||| |||||||| || | ||| | ||| | Sbjct 389334 TCAAACCCTTCTTCCATCCGTAAAAGTGCATACTGGTCAATTTACCCATTGTTGGAGCAC 389393 Query 61965 CTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTT 62024 ||||| | |||| |||||| |||||| ||| || | || |||||||| | Sbjct 389394 GAATATGCACGTTCAAAGATTGTGATTGATCAATGTAGCAAGAACGATCAGCAGCCATGT 389453 Query 62025 TTATAATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTG 62084 ||||| |||||||| | | |||||| | || || |||| ||| | |||| | Sbjct 389454 CAATAATTGTCTTTTGAGACAATTCCCAGACTGTCTTGTAAAGGTCCTTCAATTCTTGAG 389513 Query 62085 GAAGGTTTG-TA--TTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCAT 62141 ||| ||| | || || |||||||| || || | ||||| | ||| || | | Sbjct 389514 GAATGTTGGGTAGGTTTTGAATGGAACCGTTGTCAGAAATAATGTGAGACTTCATAGCTT 389573 Query 62142 CATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATT 62201 ||| ||||| || ||| | | | | | |||||| || | ||| |||| Sbjct 389574 CATCCCATAGACCCAAATCCACCAAATCACGCAACAAGTACGGATTGACAATTTGGAATT 389633 Query 62202 CTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCATTAT 62261 | || || | || | || | ||| || || |||||| ||||| | | | || || | Sbjct 389634 CACCTGATAGAACACGACGTGAGTACATGTTTGAGGTATATGGTTCGAAACATTCGTTGT 389693 Query 62262 TTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAA 62321 ||||| || || | ||| || ||||| ||||| || || | ||| | | ||||||| Sbjct 389694 AACCCAAGATCTGGGAAGTAGAGGCAGTTGGCATTGGGGCTAGCAACAGAGAGTTTCTAA 389753 Query 62322 GACCGTATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACGGTACAA 62381 ||||| | | | || | || | | || |||||||| ||| ||||| | ||| Sbjct 389754 TACCGTCTTTGATAATGTCTGCTCTCAAAGTTTCCCAATCCCATAGATCAGTAGGTGTCC 389813 Query 62382 CNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACATATGTATCGT 62441 ||| |||||||| | || ||||| |||| |||| Sbjct 389814 TGCCCCACATGTCAAATTGAAGAATACCCTCGGCAGCAGGGGATCCCTTGAATGTCTCGT 389873 Query 62442 ATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAATGGTTT 62501 |||| || || | | || | || ||||||| ||| ||| ||| || || | Sbjct 389874 ATGGGCCCTCTTCCAGGGCCAACTCGTGTGATGCCTCTAGGGCAGCGTGATACATAGTCT 389933 Query 62502 CGAAGATCTTCTTATTTAGATCTTGCGCTTCCAGGCTATCAAATGGATAATTTAAGAGAA 62561 | |||| | |||| | |||| || ||| | || || ||| | || | | Sbjct 389934 CAAAGACGTGAATATTCAATTCTTTGGCCTCCTGAGAGTCGAAAGGAATACGCAACATCA 389993 Query 62562 TAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAGA 62621 | || | || || || ||||||||||| | | | |||||||| |||||| | || || Sbjct 389994 TGAAAGTATCGGCCAACCCTTGAACACCCAAAGCAATAGGTCTGTGTCTCATGTTGGATC 390053 Query 62622 TTT---CAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTC--- 62675 || ||| ||| || |||||||| ||| || || | | | || | ||| | Sbjct 390054 TTCTGGCAGTTTC---AACGGGATAATAGTTACGGTCGATGACTCTGTTCAAATTACGGG 390110 Query 62676 TGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAAT-----CA---AATCGC-CCAT 62726 |||||| ||| || | || | || || ||| | || | || || | Sbjct 390111 TGACAAC--CTTGGAA-ATTTCATGTAGCTTCTCAAAGTTGTACCATTGAGTCTTTCCGT 390167 Query 62727 CTA------TTACAAACA-TGTT--CAATGCAACAGATGCCAGATTACAAACGGC---TA 62774 || || ||| | || | |||||||||||| |||| ||||| ||||| | Sbjct 390168 CTTCAGAAGTTTCAATGAATGCTGGCAATGCAACAGAAGCCAAGTTACACACGGCAGTTT 390227 Query 62775 CCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTC 62834 |||| | | | || | | || ||| || | ||| | |||||||||| | Sbjct 390228 CCTCTGGGGAA---GAGTACTCGACGATTTCACAACACAAGTTAGAAGACTTGATGGTAC 390284 Query 62835 CTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTAC 62894 | | || | ||| ||| |||| ||||||| | ||| || |||| ||||||||||||| Sbjct 390285 CAAGGTTCTTTTGGTTAGACTTTCTGTTACAAGAATCTTTGTAAATCATGAATGGAGTAC 390344 Query 62895 CAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTC-GAGCCTTTATTATAGAT 62953 | ||||| |||||| ||||| ||| || | ||| | | || |||| || || | | Sbjct 390345 CGGTTTCCGTCTGAGCTTCTAGAATGGCATACCATA-GCTTCTGAGCTTTGATAGTC--T 390401 Query 62954 TTGTATCTCTTTTCTCTTTC--GTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAA 63011 || || | | ||||| | ||| || ||| || |||||| || || || | | Sbjct 390402 TTCTACCACGGCCCTCTTGCACGTAACGTTCATATAAAGCTTCGAATTCATCACCATAGA 390461 Query 63012 CATTGTCCAGTCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCA 63071 ||| | | || || ||| |||| || | | ||| | ||| || |||| || | | Sbjct 390462 CATCGGCAAGACCGGGAGCTTCACTAGGGGAAAACAAGGTCCATTCACCGTTCTCTTGAA 390521 Query 63072 CTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTT 63131 ||| ||||| || | ||| |||| ||| ||||| || | |||||||| | || Sbjct 390522 CTCTCTTCATGAACAAATCTGGAACCCATAGAGCAGGGAACAAATCTCTGGCACGGATTT 390581 Query 63132 CCTCGTTTCCTGTATTCTTTTTAAGAT--CGAGGAACGCCATAATATCAGAATGCCACGG 63189 | || || || || | |||| ||| ||| || | | |||||||| ||||| || Sbjct 390582 CTTCCTTACC-GTGGT-TTTTCCGGATGTCGACAAAGTCGAAGATATCAGAGTGCCATGG 390639 Query 63190 TTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGC 63249 ||| ||||| || || | | | || || | ||||| || || ||||| | ||| | ||| Sbjct 390640 TTCTAAGTAAATTGCAAAAGCACCTGGTCTCTTGTTGCCACCTTGATCAACGTAACGAGC 390699 Query 63250 GGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCTGA 63309 ||||| || || || | | ||| || ||||||||||| || ||||| ||||| |||| Sbjct 390700 AGTGTTGTTGTATACACGAACCATGGGGATAATACCATTCGAAGTACCGTTGGTACCTGC 390759 Query 63310 GATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTT 63369 || ||| || | | |||||| || || | || || || || || | || Sbjct 390760 AATGTAGGAGCCTGTAGAACGAATGTTGTGGATGTGCAATCCGATACCGCCCGCAGTCTT 390819 Query 63370 AGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCAT 63429 ||||| | || ||| ||| || ||||| ||||| || || || || || |||| Sbjct 390820 GGAGATCATGGCACATTCTTTCAAAGTATCGTAGATACCTTCGATGGAGTCCTCTTTCAT 390879 Query 63430 GTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGG 63489 | | || |||||| |||||| || || || ||| || || || ||||| || || Sbjct 390880 GGCTACCAGGAAACAGGAAGACATCTGAGGATGAGGAGTACCGGCGTTGAATAACGTGGG 390939 Query 63490 AGAAGCGTGAGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTAT 63549 || |||||||| || || || ||| | |||||||| || || | || || || Sbjct 390940 CGATGCGTGAGTGAAATATCTTAGAGACATGAGATTGTAGGTTTCGAGCACTCTTTCGAT 390999 Query 63550 ATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGAT 63609 || | || || || || || |||||||| | || |||||||| | ||| ||| Sbjct 391000 GTCGCGGCCGTGGATACCGACGGCAACACGCATGATCAAATGCTGAGGACGTTCTGCGAC 391059 Query 63610 CTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA 63669 || | || | ||||| || ||| | || || ||||||||||||||||| Sbjct 391060 TTTACCATCGATACGGAGTAAGTACGAACGTTCTAGGGTCTTGAAACCAAAATAGTTGTA 391119 Query 63670 TGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTAC 63729 | ||||||| ||||| | |||| | |||||||| | ||| || | | | || | Sbjct 391120 TTGGAAGTCTCTGTCGTAGACAATAGCAGAGTTGAGCTCATCTTTGTGCTCCATGAC-AA 391178 Query 63730 ATCCATGGTAA---TACTT-GAAATAATAGGAAAATGTTTCCCATTTTTAGGATTGACAT 63785 ||| |||| | ||| ||||| || || | || | ||||||||||| || |||| Sbjct 391179 TTCC---GTAAACTTCCTTGGAAATCATGGGCGAGTGAATTCCATTTTTAGGGTTCACAT 391235 Query 63786 AGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGATTTG 63845 ||| | | ||||| || ||| | ||| | || | |||| || || || || | Sbjct 391236 AGTGGTACAAATCGCTCACCACCTGCGAAAACTGCTTGGTAGTTTGCTTATGCAGGTTGG 391295 Query 63846 ATACGGCTATTCTAGCGGCTAGAATGGCATAATCCGGATGTTGTGTAGTACAAGT-GGCT 63904 | | || | ||||||||||| | ||||| || || || ||| || || || || Sbjct 391296 AAATCGCAAGTCTAGCGGCTAACGTCGCATAGTCAGGGTGAATTGTCGT-CATGTAAGCA 391354 Query 63905 GCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTACACC 63948 | | || || |||| | ||||| || ||||| || ||||| Sbjct 391355 CATGTCTCAGCAGCCAAGTTATCCAACTCCACCGTCGTCACACC 391398 >seq1 Length=762788 Score = 158 bits (174), Expect = 2e-33 Identities = 483/732 (66%), Gaps = 15/732 (2%) Strand=Plus/Plus Query 32370 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATTT 32429 |||||||| ||| ||| | |||||||| || || || ||||| | || || || ||| Sbjct 618925 TTTTGGTAGTCAGACACTCTCTTTTCGAAGAAGTTGGTCTTACCAGCCAAAGAAATGTTT 618984 Query 32430 TCCATGAAATCGAATGGATTGGTAACATTATAAAtttttttAAATCCCAATT-CAGAAAT 32488 ||||| ||||||||||| || ||||| || |||| |||| | | |||| || | Sbjct 618985 TCCATAAAATCGAATGGGTTCGTAACGTTG-AAATACTTTTGATTGCCAAGAGCAACTAG 619043 Query 32489 CAATCTATCTGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAG 32548 || ||| || || |||||||| | |||| ||||| | || ||||| || | || Sbjct 619044 CAGTCTGTCGGCAACAAATTCAACATATTGGTTCATTAGGTCGGCGTTCATACCAAGTAG 619103 Query 32549 TTTAACTGGAAGAGCCACAGTAAGAAAT-TCTTGTTCAATAGAGACCGCGTCTGTTATAA 32607 ||||| || || | | | | || |||| ||| || ||| || || || || | Sbjct 619104 GGACACTGGTAGGGCATCGATGAAATATCTCTT-TTCGATTTCGACAGCCTCAGTAATGA 619162 Query 32608 TAGATCTTACTGTTTCTTCACTC-GGTGGATACAATAAATGTTTAAACATCAAACATGCG 32666 | ||| | | || || || | | || || ||| | | |||||| Sbjct 619163 TTC-TCTCAACAATCTTTGGATCAGGCTTGTTCTTCAAGTGCGCAAATAGAAGACATGCA 619221 Query 32667 AAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGC 32726 ||||| ||| |||||||||||||| | ||||| || || || ||||| || |||||| Sbjct 619222 AAATCAGTGTGAAGACCCTCGTCTCTGCAAATTAGCTCATTAGAGAACGTTAGACCGGGC 619281 Query 32727 ATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCT 32786 || | || ||| || ||||| || || | ||||| ||||| || ||||||| ||| Sbjct 619282 ATCAAACCTTTCTTCTTTAGCCAGAAAATAGCGGCAAAGGATCCGGAGAAGAAAACACCT 619341 Query 32787 TCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATA-ACCGGCGCT--GTCATGTATCCA- 32842 || || || |||||||| | | ||||||| || | | | | || ||| || ||||| Sbjct 619342 TCCACGGCAGCAAAGGCGACCAATCTCTCTGCAAATAGGGCCTCTTCGTCCTGGATCCAT 619401 Query 32843 CTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAG 32902 || || ||||| |||||||||| || | ||| || | || || ||||| || || Sbjct 619402 CTGATG-GCCCATTCGGCCTTCTCCTTGATCTGAGGAATATTTTCAATGGCATTGAATAG 619460 Query 32903 ATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGA 32962 | | | || || ||||| | || || ||||||| ||| || | || || Sbjct 619461 GAAATCGCTCTCCTTGGGGTCTTTGATGTAGGTGTCAATCAGCAGAGAGTAGGTCTCGGA 619520 Query 32963 ATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAGCATCTAGCCTCGGTAATCTGTAC 33022 || |||||||| || || || || ||||| ||||| | || || | || || || Sbjct 619521 GTGGATGTTTTCCATCATGATCTGGAACCCGTAAAAGCACTTGGCTTCTGGGATTTGAAC 619580 Query 33023 TTCTGTACAAAATCGTTCT--GCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAA 33080 ||| | | || ||||| | || || || || || || ||||| || ||||| Sbjct 619581 TTCGGCTGAGAA--GTTCTCGACCAAGTTCTCGTTGACAATACCGTCGGACGCAGCAAAG 619638 Query 33081 AACGCCAATACA 33092 || ||||| ||| Sbjct 619639 AATGCCAACACA 619650 >seq7 Length=1626734 Score = 116 bits (128), Expect = 5e-21 Identities = 494/766 (64%), Gaps = 32/766 (4%) Strand=Plus/Plus Query 62570 TCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAGATTTCAGCT 62629 || ||||||||||| |||||||| | | |||||||| |||| | || | ||||||| Sbjct 861538 TCAGCTAATCCTTGCACACCAATTGCCAAAGGTCTATTTCTCATGTTGCTGTATTCAGCT 861597 Query 62630 TCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTCTGACAATTACTTTG 62689 ||| || |||||| | | |||||| || | | | |||||| || | || Sbjct 861598 TCTTCAACAGGATAGTCACAAATATCAATGACAAGGTCCAAATTTCTCGTAACAAGCTTT 861657 Query 62690 ACCACATCCTTCAGTTTGAGAAAATCAAA--TCGC-------CCATCTATT---ACAAAC 62737 || |||| | || | |||||||| | || || || || ||||| Sbjct 861658 ACAACATGGTGGAGCATCTTGAAATCAAACTTTGCTACTGTACCTTCGATCTTCACAAAA 861717 Query 62738 ATGTTCAATGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCA-TATTG 62796 | | ||||| ||||| ||||| || || |||| ||||| | | || ||||| Sbjct 861718 CTAGGGAGAGCAACTGATGCAAGATTGCACACAGCTATCTCATCTGG-TGAGCTGTATTG 861776 Query 62797 TATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTT 62856 | ||||| ||| || || |||| || || || | |||| |||||| || Sbjct 861777 AACAATCTCGCAGCAGAGGTTGGATGACTTAATAGTACCGAGGTTTTTTTGATTTGATTT 861836 Query 62857 TTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTAT 62916 ||| || || | ||||||||| || ||||| ||| || || |||| ||| || || Sbjct 861837 TTTATTGCAGGAATCCTTATATAGCATGAAAGGACCGCCGGTCTCAACTTGACTTTGTAA 861896 Query 62917 AATCGCTTTCCAGACGACTCGAGCCTTTATTATA--GATTTGTATCTCTTTTCTCTTTCG 62974 ||| | |||| | | | ||||| | | | || ||||| ||| || | Sbjct 861897 AATTTCGCTCCAAAGCTCCTGCGCCTTAACTGTCTTGACCGGTATCAACTTTTGCT--CA 861954 Query 62975 TATAGTGTATACAATCGTTCGAACTCGTCTCCCCA--AACATTGTCCAGTCCAGGACATT 63032 || | ||| |||| ||||||||| || || | || |||| | ||||| || Sbjct 861955 TAAGATTCATATAATCTTTCGAACTCTTCACCGTAGCAATCTTGTAAA--CCAGGTGCTT 862012 Query 63033 CATCCGGACACATCAACGAC--CACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATC 63090 | ||||| | | || ||| || ||| | | || || || || |||||||| | || Sbjct 862013 CGTCCGGGGAAA--AAAGACTCCAGTCTTCATTATTCTCAACGCGCTTCATAAATAAGTC 862070 Query 63091 AGGAATCCAAAGAGCTATA-AATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCT 63149 ||||||||| ||||| ||| || ||||| | | ||| ||| || ||||| |||| Sbjct 862071 AGGAATCCAGAGAGC-ATAGAAAAGATCCCGTGCTCTCAATTCTTCTTTTCCATGGTTCT 862129 Query 63150 TTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAA 63209 | ||| | | || | | ||| ||| ||||||| || || | ||||||| || || Sbjct 862130 TCCGAAGTTGTAAAAAGTCAAAAATGTCACAATGCCAAGGCTCTAGGTATATG--CAAAA 862187 Query 63210 --CTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCT 63267 | || |||| || || || || ||||| | ||| | ||| ||||| || |||| | Sbjct 862188 GGCACCCGGCCTCTTATTCCCACCTTGATCAACGTAGCGAGCTGTGTTGTTGAAAACACG 862247 Query 63268 CAACATTGGAATAATACCATTGGATGTACCATTGGTCCCTGAGATA 63313 | ||| |||| | |||||| || || ||||| | ||||| ||| Sbjct 862248 TAGCATAGGAACCAGACCATTCGAAGTGCCATTTGAACCTGAAATA 862293 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633631936636800