Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lachancea_20fermentati_20[genbank_20GCA_5F900074765.1_202016-10-26]
8 sequences; 10,264,457 total letters
Query= NC_008291.1
Length=198050
Score E
Sequences producing significant alignments: (Bits) Value
seq2 264 1e-65
seq1 158 2e-33
seq7 116 5e-21
>seq2
Length=1086951
Score = 264 bits (292), Expect = 1e-65
Identities = 1359/2144 (63%), Gaps = 60/2144 (3%)
Strand=Plus/Plus
Query 61846 CAATG-TGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTT 61904
||||| | ||||| || | ||| || || | || || | | |||||||| || || |
Sbjct 389274 CAATGGTAAATTGGATAGCAGCAGAGGCAGCTTGGGTCCTCAAGTAGTACATACCGGTCT 389333
Query 61905 TTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTG 61964
| | ||| ||||||||||||| |||||||| || | ||| | ||| |
Sbjct 389334 TCAAACCCTTCTTCCATCCGTAAAAGTGCATACTGGTCAATTTACCCATTGTTGGAGCAC 389393
Query 61965 CTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTT 62024
||||| | |||| |||||| |||||| ||| || | || |||||||| |
Sbjct 389394 GAATATGCACGTTCAAAGATTGTGATTGATCAATGTAGCAAGAACGATCAGCAGCCATGT 389453
Query 62025 TTATAATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTG 62084
||||| |||||||| | | |||||| | || || |||| ||| | |||| |
Sbjct 389454 CAATAATTGTCTTTTGAGACAATTCCCAGACTGTCTTGTAAAGGTCCTTCAATTCTTGAG 389513
Query 62085 GAAGGTTTG-TA--TTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCAT 62141
||| ||| | || || |||||||| || || | ||||| | ||| || | |
Sbjct 389514 GAATGTTGGGTAGGTTTTGAATGGAACCGTTGTCAGAAATAATGTGAGACTTCATAGCTT 389573
Query 62142 CATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATT 62201
||| ||||| || ||| | | | | | |||||| || | ||| ||||
Sbjct 389574 CATCCCATAGACCCAAATCCACCAAATCACGCAACAAGTACGGATTGACAATTTGGAATT 389633
Query 62202 CTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCATTAT 62261
| || || | || | || | ||| || || |||||| ||||| | | | || || |
Sbjct 389634 CACCTGATAGAACACGACGTGAGTACATGTTTGAGGTATATGGTTCGAAACATTCGTTGT 389693
Query 62262 TTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAA 62321
||||| || || | ||| || ||||| ||||| || || | ||| | | |||||||
Sbjct 389694 AACCCAAGATCTGGGAAGTAGAGGCAGTTGGCATTGGGGCTAGCAACAGAGAGTTTCTAA 389753
Query 62322 GACCGTATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACGGTACAA 62381
||||| | | | || | || | | || |||||||| ||| ||||| | |||
Sbjct 389754 TACCGTCTTTGATAATGTCTGCTCTCAAAGTTTCCCAATCCCATAGATCAGTAGGTGTCC 389813
Query 62382 CNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACATATGTATCGT 62441
||| |||||||| | || ||||| |||| ||||
Sbjct 389814 TGCCCCACATGTCAAATTGAAGAATACCCTCGGCAGCAGGGGATCCCTTGAATGTCTCGT 389873
Query 62442 ATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAATGGTTT 62501
|||| || || | | || | || ||||||| ||| ||| ||| || || |
Sbjct 389874 ATGGGCCCTCTTCCAGGGCCAACTCGTGTGATGCCTCTAGGGCAGCGTGATACATAGTCT 389933
Query 62502 CGAAGATCTTCTTATTTAGATCTTGCGCTTCCAGGCTATCAAATGGATAATTTAAGAGAA 62561
| |||| | |||| | |||| || ||| | || || ||| | || | |
Sbjct 389934 CAAAGACGTGAATATTCAATTCTTTGGCCTCCTGAGAGTCGAAAGGAATACGCAACATCA 389993
Query 62562 TAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAGA 62621
| || | || || || ||||||||||| | | | |||||||| |||||| | || ||
Sbjct 389994 TGAAAGTATCGGCCAACCCTTGAACACCCAAAGCAATAGGTCTGTGTCTCATGTTGGATC 390053
Query 62622 TTT---CAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTC--- 62675
|| ||| ||| || |||||||| ||| || || | | | || | ||| |
Sbjct 390054 TTCTGGCAGTTTC---AACGGGATAATAGTTACGGTCGATGACTCTGTTCAAATTACGGG 390110
Query 62676 TGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAAT-----CA---AATCGC-CCAT 62726
|||||| ||| || | || | || || ||| | || | || || |
Sbjct 390111 TGACAAC--CTTGGAA-ATTTCATGTAGCTTCTCAAAGTTGTACCATTGAGTCTTTCCGT 390167
Query 62727 CTA------TTACAAACA-TGTT--CAATGCAACAGATGCCAGATTACAAACGGC---TA 62774
|| || ||| | || | |||||||||||| |||| ||||| ||||| |
Sbjct 390168 CTTCAGAAGTTTCAATGAATGCTGGCAATGCAACAGAAGCCAAGTTACACACGGCAGTTT 390227
Query 62775 CCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTC 62834
|||| | | | || | | || ||| || | ||| | |||||||||| |
Sbjct 390228 CCTCTGGGGAA---GAGTACTCGACGATTTCACAACACAAGTTAGAAGACTTGATGGTAC 390284
Query 62835 CTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTAC 62894
| | || | ||| ||| |||| ||||||| | ||| || |||| |||||||||||||
Sbjct 390285 CAAGGTTCTTTTGGTTAGACTTTCTGTTACAAGAATCTTTGTAAATCATGAATGGAGTAC 390344
Query 62895 CAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTC-GAGCCTTTATTATAGAT 62953
| ||||| |||||| ||||| ||| || | ||| | | || |||| || || | |
Sbjct 390345 CGGTTTCCGTCTGAGCTTCTAGAATGGCATACCATA-GCTTCTGAGCTTTGATAGTC--T 390401
Query 62954 TTGTATCTCTTTTCTCTTTC--GTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAA 63011
|| || | | ||||| | ||| || ||| || |||||| || || || | |
Sbjct 390402 TTCTACCACGGCCCTCTTGCACGTAACGTTCATATAAAGCTTCGAATTCATCACCATAGA 390461
Query 63012 CATTGTCCAGTCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCA 63071
||| | | || || ||| |||| || | | ||| | ||| || |||| || | |
Sbjct 390462 CATCGGCAAGACCGGGAGCTTCACTAGGGGAAAACAAGGTCCATTCACCGTTCTCTTGAA 390521
Query 63072 CTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTT 63131
||| ||||| || | ||| |||| ||| ||||| || | |||||||| | ||
Sbjct 390522 CTCTCTTCATGAACAAATCTGGAACCCATAGAGCAGGGAACAAATCTCTGGCACGGATTT 390581
Query 63132 CCTCGTTTCCTGTATTCTTTTTAAGAT--CGAGGAACGCCATAATATCAGAATGCCACGG 63189
| || || || || | |||| ||| ||| || | | |||||||| ||||| ||
Sbjct 390582 CTTCCTTACC-GTGGT-TTTTCCGGATGTCGACAAAGTCGAAGATATCAGAGTGCCATGG 390639
Query 63190 TTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGC 63249
||| ||||| || || | | | || || | ||||| || || ||||| | ||| | |||
Sbjct 390640 TTCTAAGTAAATTGCAAAAGCACCTGGTCTCTTGTTGCCACCTTGATCAACGTAACGAGC 390699
Query 63250 GGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCTGA 63309
||||| || || || | | ||| || ||||||||||| || ||||| ||||| ||||
Sbjct 390700 AGTGTTGTTGTATACACGAACCATGGGGATAATACCATTCGAAGTACCGTTGGTACCTGC 390759
Query 63310 GATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTT 63369
|| ||| || | | |||||| || || | || || || || || | ||
Sbjct 390760 AATGTAGGAGCCTGTAGAACGAATGTTGTGGATGTGCAATCCGATACCGCCCGCAGTCTT 390819
Query 63370 AGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCAT 63429
||||| | || ||| ||| || ||||| ||||| || || || || || ||||
Sbjct 390820 GGAGATCATGGCACATTCTTTCAAAGTATCGTAGATACCTTCGATGGAGTCCTCTTTCAT 390879
Query 63430 GTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGG 63489
| | || |||||| |||||| || || || ||| || || || ||||| || ||
Sbjct 390880 GGCTACCAGGAAACAGGAAGACATCTGAGGATGAGGAGTACCGGCGTTGAATAACGTGGG 390939
Query 63490 AGAAGCGTGAGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTAT 63549
|| |||||||| || || || ||| | |||||||| || || | || || ||
Sbjct 390940 CGATGCGTGAGTGAAATATCTTAGAGACATGAGATTGTAGGTTTCGAGCACTCTTTCGAT 390999
Query 63550 ATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGAT 63609
|| | || || || || || |||||||| | || |||||||| | ||| |||
Sbjct 391000 GTCGCGGCCGTGGATACCGACGGCAACACGCATGATCAAATGCTGAGGACGTTCTGCGAC 391059
Query 63610 CTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA 63669
|| | || | ||||| || ||| | || || |||||||||||||||||
Sbjct 391060 TTTACCATCGATACGGAGTAAGTACGAACGTTCTAGGGTCTTGAAACCAAAATAGTTGTA 391119
Query 63670 TGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTAC 63729
| ||||||| ||||| | |||| | |||||||| | ||| || | | | || |
Sbjct 391120 TTGGAAGTCTCTGTCGTAGACAATAGCAGAGTTGAGCTCATCTTTGTGCTCCATGAC-AA 391178
Query 63730 ATCCATGGTAA---TACTT-GAAATAATAGGAAAATGTTTCCCATTTTTAGGATTGACAT 63785
||| |||| | ||| ||||| || || | || | ||||||||||| || ||||
Sbjct 391179 TTCC---GTAAACTTCCTTGGAAATCATGGGCGAGTGAATTCCATTTTTAGGGTTCACAT 391235
Query 63786 AGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGATTTG 63845
||| | | ||||| || ||| | ||| | || | |||| || || || || |
Sbjct 391236 AGTGGTACAAATCGCTCACCACCTGCGAAAACTGCTTGGTAGTTTGCTTATGCAGGTTGG 391295
Query 63846 ATACGGCTATTCTAGCGGCTAGAATGGCATAATCCGGATGTTGTGTAGTACAAGT-GGCT 63904
| | || | ||||||||||| | ||||| || || || ||| || || || ||
Sbjct 391296 AAATCGCAAGTCTAGCGGCTAACGTCGCATAGTCAGGGTGAATTGTCGT-CATGTAAGCA 391354
Query 63905 GCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTACACC 63948
| | || || |||| | ||||| || ||||| || |||||
Sbjct 391355 CATGTCTCAGCAGCCAAGTTATCCAACTCCACCGTCGTCACACC 391398
>seq1
Length=762788
Score = 158 bits (174), Expect = 2e-33
Identities = 483/732 (66%), Gaps = 15/732 (2%)
Strand=Plus/Plus
Query 32370 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATTT 32429
|||||||| ||| ||| | |||||||| || || || ||||| | || || || |||
Sbjct 618925 TTTTGGTAGTCAGACACTCTCTTTTCGAAGAAGTTGGTCTTACCAGCCAAAGAAATGTTT 618984
Query 32430 TCCATGAAATCGAATGGATTGGTAACATTATAAAtttttttAAATCCCAATT-CAGAAAT 32488
||||| ||||||||||| || ||||| || |||| |||| | | |||| || |
Sbjct 618985 TCCATAAAATCGAATGGGTTCGTAACGTTG-AAATACTTTTGATTGCCAAGAGCAACTAG 619043
Query 32489 CAATCTATCTGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAG 32548
|| ||| || || |||||||| | |||| ||||| | || ||||| || | ||
Sbjct 619044 CAGTCTGTCGGCAACAAATTCAACATATTGGTTCATTAGGTCGGCGTTCATACCAAGTAG 619103
Query 32549 TTTAACTGGAAGAGCCACAGTAAGAAAT-TCTTGTTCAATAGAGACCGCGTCTGTTATAA 32607
||||| || || | | | | || |||| ||| || ||| || || || || |
Sbjct 619104 GGACACTGGTAGGGCATCGATGAAATATCTCTT-TTCGATTTCGACAGCCTCAGTAATGA 619162
Query 32608 TAGATCTTACTGTTTCTTCACTC-GGTGGATACAATAAATGTTTAAACATCAAACATGCG 32666
| ||| | | || || || | | || || ||| | | ||||||
Sbjct 619163 TTC-TCTCAACAATCTTTGGATCAGGCTTGTTCTTCAAGTGCGCAAATAGAAGACATGCA 619221
Query 32667 AAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGC 32726
||||| ||| |||||||||||||| | ||||| || || || ||||| || ||||||
Sbjct 619222 AAATCAGTGTGAAGACCCTCGTCTCTGCAAATTAGCTCATTAGAGAACGTTAGACCGGGC 619281
Query 32727 ATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCT 32786
|| | || ||| || ||||| || || | ||||| ||||| || ||||||| |||
Sbjct 619282 ATCAAACCTTTCTTCTTTAGCCAGAAAATAGCGGCAAAGGATCCGGAGAAGAAAACACCT 619341
Query 32787 TCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATA-ACCGGCGCT--GTCATGTATCCA- 32842
|| || || |||||||| | | ||||||| || | | | | || ||| || |||||
Sbjct 619342 TCCACGGCAGCAAAGGCGACCAATCTCTCTGCAAATAGGGCCTCTTCGTCCTGGATCCAT 619401
Query 32843 CTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAG 32902
|| || ||||| |||||||||| || | ||| || | || || ||||| || ||
Sbjct 619402 CTGATG-GCCCATTCGGCCTTCTCCTTGATCTGAGGAATATTTTCAATGGCATTGAATAG 619460
Query 32903 ATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGA 32962
| | | || || ||||| | || || ||||||| ||| || | || ||
Sbjct 619461 GAAATCGCTCTCCTTGGGGTCTTTGATGTAGGTGTCAATCAGCAGAGAGTAGGTCTCGGA 619520
Query 32963 ATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAGCATCTAGCCTCGGTAATCTGTAC 33022
|| |||||||| || || || || ||||| ||||| | || || | || || ||
Sbjct 619521 GTGGATGTTTTCCATCATGATCTGGAACCCGTAAAAGCACTTGGCTTCTGGGATTTGAAC 619580
Query 33023 TTCTGTACAAAATCGTTCT--GCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAA 33080
||| | | || ||||| | || || || || || || ||||| || |||||
Sbjct 619581 TTCGGCTGAGAA--GTTCTCGACCAAGTTCTCGTTGACAATACCGTCGGACGCAGCAAAG 619638
Query 33081 AACGCCAATACA 33092
|| ||||| |||
Sbjct 619639 AATGCCAACACA 619650
>seq7
Length=1626734
Score = 116 bits (128), Expect = 5e-21
Identities = 494/766 (64%), Gaps = 32/766 (4%)
Strand=Plus/Plus
Query 62570 TCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAGATTTCAGCT 62629
|| ||||||||||| |||||||| | | |||||||| |||| | || | |||||||
Sbjct 861538 TCAGCTAATCCTTGCACACCAATTGCCAAAGGTCTATTTCTCATGTTGCTGTATTCAGCT 861597
Query 62630 TCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTCTGACAATTACTTTG 62689
||| || |||||| | | |||||| || | | | |||||| || | ||
Sbjct 861598 TCTTCAACAGGATAGTCACAAATATCAATGACAAGGTCCAAATTTCTCGTAACAAGCTTT 861657
Query 62690 ACCACATCCTTCAGTTTGAGAAAATCAAA--TCGC-------CCATCTATT---ACAAAC 62737
|| |||| | || | |||||||| | || || || || |||||
Sbjct 861658 ACAACATGGTGGAGCATCTTGAAATCAAACTTTGCTACTGTACCTTCGATCTTCACAAAA 861717
Query 62738 ATGTTCAATGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCA-TATTG 62796
| | ||||| ||||| ||||| || || |||| ||||| | | || |||||
Sbjct 861718 CTAGGGAGAGCAACTGATGCAAGATTGCACACAGCTATCTCATCTGG-TGAGCTGTATTG 861776
Query 62797 TATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTT 62856
| ||||| ||| || || |||| || || || | |||| |||||| ||
Sbjct 861777 AACAATCTCGCAGCAGAGGTTGGATGACTTAATAGTACCGAGGTTTTTTTGATTTGATTT 861836
Query 62857 TTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTAT 62916
||| || || | ||||||||| || ||||| ||| || || |||| ||| || ||
Sbjct 861837 TTTATTGCAGGAATCCTTATATAGCATGAAAGGACCGCCGGTCTCAACTTGACTTTGTAA 861896
Query 62917 AATCGCTTTCCAGACGACTCGAGCCTTTATTATA--GATTTGTATCTCTTTTCTCTTTCG 62974
||| | |||| | | | ||||| | | | || ||||| ||| || |
Sbjct 861897 AATTTCGCTCCAAAGCTCCTGCGCCTTAACTGTCTTGACCGGTATCAACTTTTGCT--CA 861954
Query 62975 TATAGTGTATACAATCGTTCGAACTCGTCTCCCCA--AACATTGTCCAGTCCAGGACATT 63032
|| | ||| |||| ||||||||| || || | || |||| | ||||| ||
Sbjct 861955 TAAGATTCATATAATCTTTCGAACTCTTCACCGTAGCAATCTTGTAAA--CCAGGTGCTT 862012
Query 63033 CATCCGGACACATCAACGAC--CACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATC 63090
| ||||| | | || ||| || ||| | | || || || || |||||||| | ||
Sbjct 862013 CGTCCGGGGAAA--AAAGACTCCAGTCTTCATTATTCTCAACGCGCTTCATAAATAAGTC 862070
Query 63091 AGGAATCCAAAGAGCTATA-AATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCT 63149
||||||||| ||||| ||| || ||||| | | ||| ||| || ||||| ||||
Sbjct 862071 AGGAATCCAGAGAGC-ATAGAAAAGATCCCGTGCTCTCAATTCTTCTTTTCCATGGTTCT 862129
Query 63150 TTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAA 63209
| ||| | | || | | ||| ||| ||||||| || || | ||||||| || ||
Sbjct 862130 TCCGAAGTTGTAAAAAGTCAAAAATGTCACAATGCCAAGGCTCTAGGTATATG--CAAAA 862187
Query 63210 --CTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCT 63267
| || |||| || || || || ||||| | ||| | ||| ||||| || |||| |
Sbjct 862188 GGCACCCGGCCTCTTATTCCCACCTTGATCAACGTAGCGAGCTGTGTTGTTGAAAACACG 862247
Query 63268 CAACATTGGAATAATACCATTGGATGTACCATTGGTCCCTGAGATA 63313
| ||| |||| | |||||| || || ||||| | ||||| |||
Sbjct 862248 TAGCATAGGAACCAGACCATTCGAAGTGCCATTTGAACCTGAAATA 862293
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 633631936636800
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