Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lachancea_20fermentati_20[genbank_20GCA_5F900074765.1_202016-10-26] 8 sequences; 10,264,457 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq4 132 4e-26 seq8 114 1e-20 seq6 95.1 1e-14 >seq4 Length=1192607 Score = 132 bits (146), Expect = 4e-26 Identities = 169/230 (73%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || ||||||||||| ||||| | || || | ||||| || || ||| Sbjct 499075 ATGCAGATTTTCGTCAAGACTTTGACAGGTAAGACTATTACCTTGGAAGTCGAATCCTCT 499134 Query 25059 GACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115 || || ||||| || || || | || | ||| ||||| ||||| |||||||||||| Sbjct 499135 GATACCATCGA--CAATGTCAAATCCAAGATTCAA-GACAAGGAAGGTATTCCACCTGAC 499191 Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175 || || | | ||||| ||||| || ||||| || |||| | ||| | |||||| Sbjct 499192 CAGCAAAGATTGATTTTCGCCGGTAAGCAATTGGAGGATGGCAGAACTCTTTCTGATTAC 499251 Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 ||||||||||| ||||| || |||| || || | ||||||||||| || Sbjct 499252 AATATTCAAAAGGAATCTACCTTACACTTGGTTTTGAGGCTAAGAGGTGG 499301 Score = 131 bits (144), Expect = 1e-25 Identities = 171/234 (73%), Gaps = 2/234 (1%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || |||||| | |||||||| ||||||| | ||||| || || ||| Sbjct 499759 ATGCAGATCTTCGTCAAGACTCTAACCGGTAAGACCATCACCTTGGAAGTCGAATCCTCT 499818 Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 || || ||||| | ||| | || | ||| ||||| ||||| |||||||||||||| Sbjct 499819 GATACCATCGACAACGTTAAGTCCAAGATTCAA-GACAAGGAAGGTATTCCACCTGACCA 499877 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 || | | ||||| ||||| || ||||| || |||| | ||| | |||||||| Sbjct 499878 GCAAAGATTGATTTTCGCCGGTAAGCAATTGGAGGATGGCAGAACTCTTTCTGATTACAA 499937 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGGAAATTA 25231 ||||||||| ||||| || |||| || || | || ||||||| || ||||| Sbjct 499938 TATTCAAAAGGAATCTACCTTACACTTGGTTTTGAGATTAAGAGGTGGTAATTA 499991 Score = 113 bits (124), Expect = 4e-20 Identities = 168/236 (71%), Gaps = 8/236 (3%) Strand=Plus/Plus Query 24994 GAACAATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGT 25053 ||| |||||| || || || |||||||| ||||| || ||||||| | || || || | Sbjct 498614 GAAAAATGCAGATTTTCGTCAAGACTTTAACCGGCAAGACCATCACTCTGGAGGTTGAAT 498673 Query 25054 CGTCTGACACTATCGA----GTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCA 25109 | ||||| || ||||| |||| || | || | || || || ||||| |||||| Sbjct 498674 CCTCTGATACCATCGACAACGTCA---AATCCAAGATCCAG-GATAAGGAAGGTATTCCA 498729 Query 25110 CCTGACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGC 25169 ||||| ||||| | | ||||| || || || || || || |||| | ||| | Sbjct 498730 CCTGATCAACAAAGATTGATTTTCGCTGGTAAGCAGTTGGAGGATGGCAGAACTCTTTCT 498789 Query 25170 GATTACAATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 ||||||||||||||||| ||||| || |||| | || | ||||||||||| || Sbjct 498790 GATTACAATATTCAAAAGGAATCTACCTTACACCTGGTTTTGAGGCTAAGAGGTGG 498845 Score = 111 bits (122), Expect = 1e-19 Identities = 163/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || |||||||| |||||||| ||||||| | || || ||||| ||| Sbjct 499531 ATGCAGATTTTCGTCAAGACTTTAACCGGTAAGACCATCACTTTGGAGGTTGAGTCTTCT 499590 Query 25059 GACACTATCGAGT-CACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 ||||| || || | | || | || | ||| ||||| ||||| || ||||||||||| Sbjct 499591 GACACGATAGACAACGTTAAATCCAAGATTCAA-GACAAGGAAGGTATCCCACCTGACCA 499649 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 || | | ||||| ||||| || || || || |||| | || | || ||||| Sbjct 499650 GCAAAGACTGATTTTCGCCGGTAAGCAGTTGGAGGATGGCAGAACGCTTTCTGACTACAA 499709 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 || ||||| || |||||||| || || || | || |||||||| || Sbjct 499710 CATCCAAAAGGAGTCCACGCTCCACTTGGTTTTGAGACTAAGAGGTGG 499757 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || |||||| | |||||||| ||||||| | ||||| || || ||| Sbjct 498847 ATGCAGATCTTCGTCAAGACTCTAACCGGTAAGACCATCACCTTGGAAGTCGAATCCTCT 498906 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 || || ||||| | || || ||| || || ||||| |||||||||||||| Sbjct 498907 GATACCATCGACAACGTTAAATCCAAGATCCAGGATAAGGAAGGTATTCCACCTGACCAG 498966 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 || | | ||||| || || || || || || |||| | || | || ||||| Sbjct 498967 CAAAGACTGATTTTCGCTGGTAAGCAGTTGGAGGATGGCAGAACGCTTTCTGACTACAAC 499026 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 || ||||| || || || ||||||| || | || |||||||| || Sbjct 499027 ATCCAAAAGGAGTCTACTTTACATTTGGTTTTGAGACTAAGAGGTGG 499073 >seq8 Length=1564113 Score = 114 bits (126), Expect = 1e-20 Identities = 146/199 (73%), Gaps = 4/199 (2%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| ||||| ||||| || |||||||| | || || | ||||| ||||| ||| Sbjct 561232 ATGCAAATTTTTGTTAAGACCTTAACCGGTAAGACAATTACCCTTGAAGTCGAGTCTTCT 561173 Query 25059 GACACTATCGAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116 ||||||||||| || || ||| || ||| ||||| || || || |||||||||| Sbjct 561172 GACACTATCGA--CAATGTCAAGTCCAAGATCCAAGACAAGGAGGGTATCCCACCTGACC 561115 Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176 |||| | | || ||||| || || ||||| ||||||| | ||| || || |||| Sbjct 561114 AACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGCAGAACTTTGTCTGACTACA 561055 Query 25177 ATATTCAAAAAGAATCCAC 25195 | || ||||| || || || Sbjct 561054 ACATCCAAAAGGAGTCTAC 561036 >seq6 Length=1504611 Score = 95.1 bits (104), Expect = 1e-14 Identities = 136/189 (72%), Gaps = 2/189 (1%) Strand=Plus/Plus Query 25008 TTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCTGACACTATC 25067 ||||| ||||| ||||| ||||| |||| || | ||||| || || || ||||| || Sbjct 86082 TTTGTGAAGACCTTGACTGGTAAGACCATTACTTTGGAAGTCGAATCTTCAGACACCATT 86141 Query 25068 GAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAACAGCGGAT 25126 || | ||| | || | ||| ||||| ||||| ||||| ||||||||||| | | Sbjct 86142 GACAACGTCAAGTCTAAGATTCAA-GACAAGGAAGGTATTCCTCCTGACCAACAAAGATT 86200 Query 25127 TATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAATATTCAAAA 25186 || ||||| || || ||||| ||||||| | || || || ||||| |||||||| Sbjct 86201 GATCTTTGCTGGTAAGCAATTGGAAGATGGCAGAACCTTGTCTGACTACAACATTCAAAA 86260 Query 25187 AGAATCCAC 25195 ||||| || Sbjct 86261 GGAATCTAC 86269 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433327957750520