Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lachancea_20fermentati_20[genbank_20GCA_5F900074765.1_202016-10-26]
8 sequences; 10,264,457 total letters
Query= NC_008586.1
Length=131204
Score E
Sequences producing significant alignments: (Bits) Value
seq4 156 4e-33
seq8 147 2e-30
seq6 127 2e-24
>seq4
Length=1192607
Score = 156 bits (172), Expect = 4e-33
Identities = 183/245 (75%), Gaps = 2/245 (1%)
Strand=Plus/Plus
Query 22188 ATAAGAGATATAGT-TTTATACATTTGTAAAGATGCAAATTTTTGTTAAAACTTTAACCG 22246
||||||| | || |||||||| || ||| ||||| ||||| || || ||||||||||
Sbjct 498588 ATAAGAGCAAAGGTATTTATACAGCTGAAAA-ATGCAGATTTTCGTCAAGACTTTAACCG 498646
Query 22247 GTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAAAAAA 22306
| || || ||||||| || || ||| || | |||||| | ||| | ||||| || |
Sbjct 498647 GCAAGACCATCACTCTGGAGGTTGAATCCTCTGATACCATCGACAACGTCAAATCCAAGA 498706
Query 22307 TTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAACAGT 22366
| || || ||||| ||||||||||| ||||||||| | | || || || || || ||||
Sbjct 498707 TCCAGGATAAGGAAGGTATTCCACCTGATCAACAAAGATTGATTTTCGCTGGTAAGCAGT 498766
Query 22367 TAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACCATACATTTAG 22426
| |||||| | | || | || |||||||| |||||||| ||||| ||| |||| | |
Sbjct 498767 TGGAGGATGGCAGAACTCTTTCTGATTACAATATTCAAAAGGAATCTACCTTACACCTGG 498826
Query 22427 TTTTG 22431
|||||
Sbjct 498827 TTTTG 498831
Score = 145 bits (160), Expect = 6e-30
Identities = 160/213 (75%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| ||||| || || ||||| || ||||| || | || | ||||| ||| || |
Sbjct 499075 ATGCAGATTTTCGTCAAGACTTTGACAGGTAAGACTATTACCTTGGAAGTCGAATCCTCT 499134
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|||||| | ||| || ||||| || |||||||||||||| ||||||||||| || ||
Sbjct 499135 GATACCATCGACAATGTCAAATCCAAGATTCAAGACAAGGAAGGTATTCCACCTGACCAG 499194
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
||| | | || || ||||| || || || |||||| | | || | || ||||||||
Sbjct 499195 CAAAGATTGATTTTCGCCGGTAAGCAATTGGAGGATGGCAGAACTCTTTCTGATTACAAT 499254
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTG 22431
|||||||| ||||| ||| |||| || ||||||
Sbjct 499255 ATTCAAAAGGAATCTACCTTACACTTGGTTTTG 499287
Score = 141 bits (156), Expect = 8e-29
Identities = 162/218 (74%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| || || || || ||| |||||||||| || |||| | ||||| ||| || |
Sbjct 499759 ATGCAGATCTTCGTCAAGACTCTAACCGGTAAGACCATCACCTTGGAAGTCGAATCCTCT 499818
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|||||| | ||| | | || || |||||||||||||| ||||||||||| || ||
Sbjct 499819 GATACCATCGACAACGTTAAGTCCAAGATTCAAGACAAGGAAGGTATTCCACCTGACCAG 499878
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
||| | | || || ||||| || || || |||||| | | || | || ||||||||
Sbjct 499879 CAAAGATTGATTTTCGCCGGTAAGCAATTGGAGGATGGCAGAACTCTTTCTGATTACAAT 499938
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATT 22436
|||||||| ||||| ||| |||| || |||||| ||||
Sbjct 499939 ATTCAAAAGGAATCTACCTTACACTTGGTTTTGAGATT 499976
Score = 123 bits (136), Expect = 2e-23
Identities = 157/216 (73%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| || || || || ||| |||||||||| || |||| | ||||| ||| || |
Sbjct 498847 ATGCAGATCTTCGTCAAGACTCTAACCGGTAAGACCATCACCTTGGAAGTCGAATCCTCT 498906
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|||||| | ||| | | ||| || || || || ||||| ||||||||||| || ||
Sbjct 498907 GATACCATCGACAACGTTAAATCCAAGATCCAGGATAAGGAAGGTATTCCACCTGACCAG 498966
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
||| | || || || || || || ||||| |||||| | | || | || || ||||||
Sbjct 498967 CAAAGACTGATTTTCGCTGGTAAGCAGTTGGAGGATGGCAGAACGCTTTCTGACTACAAC 499026
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGA 22434
|| ||||| || || || ||||||| |||||| ||
Sbjct 499027 ATCCAAAAGGAGTCTACTTTACATTTGGTTTTGAGA 499062
Score = 123 bits (136), Expect = 2e-23
Identities = 157/216 (73%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| || || || || ||| |||||||||| || | ||| | || || || | |
Sbjct 499303 ATGCAGATCTTCGTCAAGACTCTAACCGGTAAGACTATTACTTTGGAGGTTGAGTCTTCT 499362
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| || | ||| | ||||| || |||||||||||||| ||||||||||| || |||
Sbjct 499363 GACACGATAGACAACGTCAAATCCAAGATTCAAGACAAGGAAGGTATTCCACCAGACCAA 499422
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
||| | | || || ||||| || || || |||||| | | || | || || ||||||
Sbjct 499423 CAAAGATTGATTTTCGCCGGTAAGCAATTGGAGGATGGCAGAACGCTTTCTGACTACAAC 499482
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGA 22434
|||||||| || || || ||||||| |||||| ||
Sbjct 499483 ATTCAAAAGGAGTCTACTTTACATTTGGTTTTGAGA 499518
Score = 123 bits (136), Expect = 2e-23
Identities = 157/216 (73%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| ||||| || || |||||||||||||| || ||||| | || || || | |
Sbjct 499531 ATGCAGATTTTCGTCAAGACTTTAACCGGTAAGACCATCACTTTGGAGGTTGAGTCTTCT 499590
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| || | ||| | | ||| || |||||||||||||| ||||| ||||| || ||
Sbjct 499591 GACACGATAGACAACGTTAAATCCAAGATTCAAGACAAGGAAGGTATCCCACCTGACCAG 499650
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
||| | || || || ||||| || ||||| |||||| | | || | || || ||||||
Sbjct 499651 CAAAGACTGATTTTCGCCGGTAAGCAGTTGGAGGATGGCAGAACGCTTTCTGACTACAAC 499710
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGA 22434
|| ||||| || ||||| | || || |||||| ||
Sbjct 499711 ATCCAAAAGGAGTCCACGCTCCACTTGGTTTTGAGA 499746
>seq8
Length=1564113
Score = 147 bits (162), Expect = 2e-30
Identities = 171/231 (74%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275
|||||||||||||||||||| || ||||||||||| || | || |||||||| || |
Sbjct 561235 AAGATGCAAATTTTTGTTAAGACCTTAACCGGTAAGACAATTACCCTTGAAGTCGAGTCT 561176
Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335
| || || | ||| || |||| || || ||||||||||||||||| ||||| ||
Sbjct 561175 TCTGACACTATCGACAATGTCAAGTCCAAGATCCAAGACAAGGAGGGTATCCCACCTGAC 561116
Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395
|||||| | | || ||||| || || || || || ||| | | || | || || |||
Sbjct 561115 CAACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGCAGAACTTTGTCTGACTAC 561056
Query 22396 AACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
||||| ||||| || || ||| | || || |||||| ||||| | || |||
Sbjct 561055 AACATCCAAAAGGAGTCTACCTTGCACTTGGTTTTGAGATTGAGAGGTGGT 561005
>seq6
Length=1504611
Score = 127 bits (140), Expect = 2e-24
Identities = 160/220 (73%), Gaps = 0/220 (0%)
Strand=Plus/Plus
Query 22227 TTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGT 22286
|||||| || || || || ||||| || | ||| | ||||| ||| | | || ||| |
Sbjct 86081 TTTTGTGAAGACCTTGACTGGTAAGACCATTACTTTGGAAGTCGAATCTTCAGACACCAT 86140
Query 22287 GGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCT 22346
||| | |||| || |||||||||||||| |||||||| || || |||||| | |
Sbjct 86141 TGACAACGTCAAGTCTAAGATTCAAGACAAGGAAGGTATTCCTCCTGACCAACAAAGATT 86200
Query 22347 TATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAA 22406
|| ||||| || || || || || ||| | | ||| | || || ||||||||||||||
Sbjct 86201 GATCTTTGCTGGTAAGCAATTGGAAGATGGCAGAACCTTGTCTGACTACAACATTCAAAA 86260
Query 22407 AGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
||||| ||| | || || |||||| ||||| | || |||
Sbjct 86261 GGAATCTACCTTGCACTTGGTTTTGAGATTGAGAGGTGGT 86300
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 419727959076520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |