Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lachancea_20fermentati_20[genbank_20GCA_5F900074765.1_202016-10-26] 8 sequences; 10,264,457 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq4 201 2e-46 seq6 165 2e-35 seq8 150 3e-31 >seq4 Length=1192607 Score = 201 bits (222), Expect = 2e-46 Identities = 185/234 (79%), Gaps = 0/234 (0%) Strand=Plus/Minus Query 68228 TTAATTTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATA 68287 |||||| || || | | | ||| |||||||||| || || || ||||| || || || Sbjct 499992 TTAATTACCACCTCTTAATCTCAAAACCAAGTGTAAGGTAGATTCCTTTTGAATATTGTA 499933 Query 68288 ATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTC 68347 ||| || || || || ||||| || || ||||| |||||||| || | |||||| ||||| Sbjct 499932 ATCAGAAAGAGTTCTGCCATCCTCCAATTGCTTACCGGCGAAAATCAATCTTTGCTGGTC 499873 Query 68348 GGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGA 68407 |||||||| |||||||||||||||||||| | ||| ||| |||||||| || | || Sbjct 499872 AGGTGGAATACCTTCCTTGTCTTGAATCTTGGACTTAACGTTGTCGATGGTATCAGAGGA 499813 Query 68408 TTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 ||| ||||||||||||||||| || || || || ||||||||||| |||||||| Sbjct 499812 TTCGACTTCCAAGGTGATGGTCTTACCGGTTAGAGTCTTGACGAAGATCTGCAT 499759 Score = 196 bits (216), Expect = 9e-45 Identities = 171/213 (80%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308 ||| |||||||| ||||||||||| ||||||||||| || || || || || || ||||| Sbjct 499743 CAAAACCAAGTGGAGCGTGGACTCCTTTTGGATGTTGTAGTCAGAAAGCGTTCTGCCATC 499684 Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368 || |||||||| |||||||| || |||||||| ||||| ||||| || ||||||||||| Sbjct 499683 CTCCAACTGCTTACCGGCGAAAATCAGTCTTTGCTGGTCAGGTGGGATACCTTCCTTGTC 499624 Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428 ||||||||| | || ||| || || ||||| | || || || ||||| |||||||| Sbjct 499623 TTGAATCTTGGATTTAACGTTGTCTATCGTGTCAGAAGACTCAACCTCCAAAGTGATGGT 499564 Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || || || | ||||||||||| |||||||| Sbjct 499563 CTTACCGGTTAAAGTCTTGACGAAAATCTGCAT 499531 Score = 190 bits (210), Expect = 4e-43 Identities = 170/213 (80%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308 ||| ||||| |||| || ||||| ||||||||||| || || || || || || ||||| Sbjct 499059 CAAAACCAAATGTAAAGTAGACTCCTTTTGGATGTTGTAGTCAGAAAGCGTTCTGCCATC 499000 Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368 || |||||||| || ||||| || |||||||| ||||| |||||||| |||||||| || Sbjct 498999 CTCCAACTGCTTACCAGCGAAAATCAGTCTTTGCTGGTCAGGTGGAATACCTTCCTTATC 498940 Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428 || ||||| | || ||| |||||||| || | ||||| ||||||||||||||||| Sbjct 498939 CTGGATCTTGGATTTAACGTTGTCGATGGTATCAGAGGATTCGACTTCCAAGGTGATGGT 498880 Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || || || || ||||||||||| |||||||| Sbjct 498879 CTTACCGGTTAGAGTCTTGACGAAGATCTGCAT 498847 Score = 181 bits (200), Expect = 2e-40 Identities = 168/213 (79%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308 ||| |||||||||| || || || ||||| || || ||||| || || || || ||||| Sbjct 499287 CAAAACCAAGTGTAAGGTAGATTCCTTTTGAATATTGTAATCAGAAAGAGTTCTGCCATC 499228 Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368 || || ||||| |||||||| || | |||||| ||||| |||||||| ||||||||||| Sbjct 499227 CTCCAATTGCTTACCGGCGAAAATCAATCTTTGCTGGTCAGGTGGAATACCTTCCTTGTC 499168 Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428 ||||||||| | ||||| |||||||| || | ||||| ||||||||||| || || Sbjct 499167 TTGAATCTTGGATTTGACATTGTCGATGGTATCAGAGGATTCGACTTCCAAGGTAATAGT 499108 Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || || || | ||||||||||| |||||||| Sbjct 499107 CTTACCTGTCAAAGTCTTGACGAAAATCTGCAT 499075 Score = 178 bits (196), Expect = 2e-39 Identities = 167/213 (78%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308 ||| ||||| |||| || ||||| ||||| ||||| || || || || || || ||||| Sbjct 499515 CAAAACCAAATGTAAAGTAGACTCCTTTTGAATGTTGTAGTCAGAAAGCGTTCTGCCATC 499456 Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368 || || ||||| |||||||| || | |||||||||||| |||||||| ||||||||||| Sbjct 499455 CTCCAATTGCTTACCGGCGAAAATCAATCTTTGTTGGTCTGGTGGAATACCTTCCTTGTC 499396 Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428 ||||||||| | |||||| || || ||||| | || || || ||||| || || || Sbjct 499395 TTGAATCTTGGATTTGACGTTGTCTATCGTGTCAGAAGACTCAACCTCCAAAGTAATAGT 499336 Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || || || || ||||||||||| |||||||| Sbjct 499335 CTTACCGGTTAGAGTCTTGACGAAGATCTGCAT 499303 Score = 165 bits (182), Expect = 2e-35 Identities = 165/214 (77%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308 ||| |||| ||||| || || || ||||| || || ||||| || || || || ||||| Sbjct 498831 CAAAACCAGGTGTAAGGTAGATTCCTTTTGAATATTGTAATCAGAAAGAGTTCTGCCATC 498772 Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368 || |||||||| || ||||| || | ||||||||| || |||||||| |||||||| || Sbjct 498771 CTCCAACTGCTTACCAGCGAAAATCAATCTTTGTTGATCAGGTGGAATACCTTCCTTATC 498712 Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428 || ||||| | |||||| |||||||| || | ||||| || |||| |||||||| Sbjct 498711 CTGGATCTTGGATTTGACGTTGTCGATGGTATCAGAGGATTCAACCTCCAGAGTGATGGT 498652 Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462 || || || | ||||||||||| ||||||||| Sbjct 498651 CTTGCCGGTTAAAGTCTTGACGAAAATCTGCATT 498618 >seq6 Length=1504611 Score = 165 bits (182), Expect = 2e-35 Identities = 159/204 (78%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308 ||| |||||||| | || || || ||||| ||||| || || || | || || ||||| Sbjct 86285 CAAAACCAAGTGCAAGGTAGATTCCTTTTGAATGTTGTAGTCAGACAAGGTTCTGCCATC 86226 Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368 ||| || ||||| || || || || | |||||||||||| || ||||| ||||||||||| Sbjct 86225 TTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGAGGAATACCTTCCTTGTC 86166 Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428 ||||||||| | ||||||| || |||||||||| ||||| |||||||| || ||||| Sbjct 86165 TTGAATCTTAGACTTGACGTTGTCAATGGTGTCTGAAGATTCGACTTCCAAAGTAATGGT 86106 Query 68429 TTTTCCCGTGAGGGTCTTGACGAA 68452 || || || | |||||| || || Sbjct 86105 CTTACCAGTCAAGGTCTTCACAAA 86082 >seq8 Length=1564113 Score = 150 bits (166), Expect = 3e-31 Identities = 161/213 (76%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308 ||| |||||||| | || ||||| ||||||||||| || || || | || || ||||| Sbjct 561020 CAAAACCAAGTGCAAGGTAGACTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTGCCATC 561079 Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368 ||| || ||||| || || || || | |||||||||||| ||||| || || |||||||| Sbjct 561080 TTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCCTCCTTGTC 561139 Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428 ||| ||||| | |||||| ||||| ||||| | || || ||||| | ||| || || Sbjct 561140 TTGGATCTTGGACTTGACATTGTCGATAGTGTCAGAAGACTCGACTTCAAGGGTAATTGT 561199 Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || || || | |||||| || || || ||||| Sbjct 561200 CTTACCGGTTAAGGTCTTAACAAAAATTTGCAT 561232 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921622307837760