Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lachancea_20fermentati_20[genbank_20GCA_5F900074765.1_202016-10-26]
8 sequences; 10,264,457 total letters
Query= NC_009011.2
Length=131331
Score E
Sequences producing significant alignments: (Bits) Value
seq4 122 7e-23
seq6 113 4e-20
>seq4
Length=1192607
Score = 122 bits (134), Expect = 7e-23
Identities = 165/230 (72%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
||||| || | ||| |||||||| || |||| |||||||| |||||||| ||||||||
Sbjct 499304 ATACCACCTCTTAGCCTCAAAACCAAGTGTAAGGTAGATTCCTTTTGAATATTGTAATCA 499245
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
| ||| | ||| || | ||| ||||| ||| | || | | || ||||| ||
Sbjct 499244 GAAAGAGTTCTGCCATCCTCCAATTGCTTACCGGCGAAAATCAATCTTTGCTGGTCAGGT 499185
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332
||||| ||||| ||||| |||||| ||| | | || | ||| || | |||||||
Sbjct 499184 GGAATACCTTCCTTGTCTTGAATCTTGGATTTGACATTGTCGATGGTATCAGAGGATTCG 499125
Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|| |||| ||| | || || || |||| ||| || || |||||||||||
Sbjct 499124 ACTTCCAAGGTAATAGTCTTACCTGTCAAAGTCTTGACGAAAATCTGCAT 499075
Score = 113 bits (124), Expect = 4e-20
Identities = 163/230 (71%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
||||| || | |||||||||||| ||||||| ||||| || ||||| |||||||| ||
Sbjct 499076 ATACCACCTCTTAGTCTCAAAACCAAATGTAAAGTAGACTCCTTTTGGATGTTGTAGTCA 499017
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
| || | ||| || | || ||||||||| | || || | || ||||| ||
Sbjct 499016 GAAAGCGTTCTGCCATCCTCCAACTGCTTACCAGCGAAAATCAGTCTTTGCTGGTCAGGT 498957
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332
||||| ||||| || || ||||| ||| | | || | ||| || | |||||||
Sbjct 498956 GGAATACCTTCCTTATCCTGGATCTTGGATTTAACGTTGTCGATGGTATCAGAGGATTCG 498897
Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|| |||| ||| | || || ||||| ||||| || || || ||||||||
Sbjct 498896 ACTTCCAAGGTGATGGTCTTACCGGTTAGAGTCTTGACGAAGATCTGCAT 498847
Score = 109 bits (120), Expect = 5e-19
Identities = 162/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
||||| || | |||||||||||| ||||||| ||||| || |||||||||||||| ||
Sbjct 499532 ATACCACCTCTTAGTCTCAAAACCAAATGTAAAGTAGACTCCTTTTGAATGTTGTAGTCA 499473
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
| || | ||| || | ||| ||||| ||| | || | | |||||||| ||
Sbjct 499472 GAAAGCGTTCTGCCATCCTCCAATTGCTTACCGGCGAAAATCAATCTTTGTTGGTCTGGT 499413
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332
||||| ||||| ||||| |||||| ||| | | || | ||||| | || ||
Sbjct 499412 GGAATACCTTCCTTGTCTTGAATCTTGGATTTGACGTTGTCTATCGTGTCAGAAGACTCA 499353
Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|| |||| || | || || ||||| ||||| || || || ||||||||
Sbjct 499352 ACCTCCAAAGTAATAGTCTTACCGGTTAGAGTCTTGACGAAGATCTGCAT 499303
Score = 104 bits (114), Expect = 2e-17
Identities = 161/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
||||| || | ||| |||||||| | |||| |||||||| |||||||| ||||||||
Sbjct 498848 ATACCACCTCTTAGCCTCAAAACCAGGTGTAAGGTAGATTCCTTTTGAATATTGTAATCA 498789
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
| ||| | ||| || | || ||||||||| | || | | ||||| || ||
Sbjct 498788 GAAAGAGTTCTGCCATCCTCCAACTGCTTACCAGCGAAAATCAATCTTTGTTGATCAGGT 498729
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332
||||| ||||| || || ||||| ||| | | || | ||| || | ||||||
Sbjct 498728 GGAATACCTTCCTTATCCTGGATCTTGGATTTGACGTTGTCGATGGTATCAGAGGATTCA 498669
Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|| |||| || | || |||||||| | ||| || || |||||||||||
Sbjct 498668 ACCTCCAGAGTGATGGTCTTGCCGGTTAAAGTCTTGACGAAAATCTGCAT 498619
Score = 86.0 bits (94), Expect = 5e-12
Identities = 157/230 (68%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
||||| || | |||||||||||| || || | ||| || || ||||| |||||||| ||
Sbjct 499760 ATACCACCTCTTAGTCTCAAAACCAAGTGGAGCGTGGACTCCTTTTGGATGTTGTAGTCA 499701
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
| || | ||| || | || ||||| ||| | || || | || ||||| ||
Sbjct 499700 GAAAGCGTTCTGCCATCCTCCAACTGCTTACCGGCGAAAATCAGTCTTTGCTGGTCAGGT 499641
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332
|| || ||||| ||||| |||||| ||| | | || | ||||| | || ||
Sbjct 499640 GGGATACCTTCCTTGTCTTGAATCTTGGATTTAACGTTGTCTATCGTGTCAGAAGACTCA 499581
Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|| |||| || | || || ||||| | ||| || || |||||||||||
Sbjct 499580 ACCTCCAAAGTGATGGTCTTACCGGTTAAAGTCTTGACGAAAATCTGCAT 499531
>seq6
Length=1504611
Score = 113 bits (124), Expect = 4e-20
Identities = 158/222 (71%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
||||| || | | ||||||||| || || | |||||||| |||||||||||||| ||
Sbjct 86302 ATACCACCTCTCAATCTCAAAACCAAGTGCAAGGTAGATTCCTTTTGAATGTTGTAGTCA 86243
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
|| || | |||||| | ||| |||||||| |||| | | |||||||| |||
Sbjct 86242 GACAAGGTTCTGCCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGA 86183
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332
||||| ||||| ||||| |||||| || | | |||| |||||| | ||||||
Sbjct 86182 GGAATACCTTCCTTGTCTTGAATCTTAGACTTGACGTTGTCAATGGTGTCTGAAGATTCG 86123
Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAA 114374
|| |||| || | || || || |||| || || ||||||
Sbjct 86122 ACTTCCAAAGTAATGGTCTTACCAGTCAAGGTCTTCACAAAA 86081
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 420134359036896
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |