Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lachancea_20fermentati_20[genbank_20GCA_5F900074765.1_202016-10-26]
8 sequences; 10,264,457 total letters
Query= NC_009898.1
Length=368683
Score E
Sequences producing significant alignments: (Bits) Value
seq4 123 6e-23
>seq4
Length=1192607
Score = 123 bits (136), Expect = 6e-23
Identities = 142/191 (74%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
|| |||||||| || ||||| | ||||| | || || || || || || || |||||
Sbjct 499037 TCCTTTTGGATGTTGTAGTCAGAAAGCGTTCTGCCATCCTCCAACTGCTTACCAGCGAAA 498978
Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402
||||| | || || | ||| || ||||| ||||||||||| || | ||| |||||
Sbjct 498977 ATCAGTCTTTGCTGGTCAGGTGGAATACCTTCCTTATCCTGGATCTTGGATTTAACGTTG 498918
Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462
|| || | ||| ||||| ||||| | ||||| ||||| ||||| ||||||||||||
Sbjct 498917 TCGATGGTATCAGAGGATTCGACTTCCAAGGTGATGGTCTTACCGGTTAGAGTCTTGACG 498858
Query 288463 AATATCTGCAT 288473
|| ||||||||
Sbjct 498857 AAGATCTGCAT 498847
Score = 118 bits (130), Expect = 3e-21
Identities = 142/193 (74%), Gaps = 0/193 (0%)
Strand=Plus/Minus
Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341
||| ||||| ||||| || || | || || | || || || || || || || |||||
Sbjct 498810 TTCCTTTTGAATATTGTAATCAGAAAGAGTTCTGCCATCCTCCAACTGCTTACCAGCGAA 498751
Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401
|||| | |||||| | ||| || ||||| ||||||||||| || | ||| |||||
Sbjct 498750 AATCAATCTTTGTTGATCAGGTGGAATACCTTCCTTATCCTGGATCTTGGATTTGACGTT 498691
Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461
|| || | ||| ||||| || || || ||||| ||||| ||||| | |||||||||
Sbjct 498690 GTCGATGGTATCAGAGGATTCAACCTCCAGAGTGATGGTCTTGCCGGTTAAAGTCTTGAC 498631
Query 288462 GAATATCTGCATT 288474
||| |||||||||
Sbjct 498630 GAAAATCTGCATT 498618
Score = 104 bits (114), Expect = 6e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| | ||||| | || | || | |||| || |||||||| || ||||| |
Sbjct 499757 CCACCTCTTAGTCTCAAAACCAAGTGGAGCGTGGACTCCTTTTGGATGTTGTAGTCAGAA 499698
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
||||| | || || || || || || || ||||| ||||| | || || | ||||
Sbjct 499697 AGCGTTCTGCCATCCTCCAACTGCTTACCGGCGAAAATCAGTCTTTGCTGGTCAGGTGGG 499638
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426
|| ||||| || || || || || | ||| ||||| ||||| | || || || ||
Sbjct 499637 ATACCTTCCTTGTCTTGAATCTTGGATTTAACGTTGTCTATCGTGTCAGAAGACTCAACC 499578
Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| | ||||| ||||| ||||| | |||||||||||| ||||||||
Sbjct 499577 TCCAAAGTGATGGTCTTACCGGTTAAAGTCTTGACGAAAATCTGCAT 499531
Score = 98.7 bits (108), Expect = 2e-15
Identities = 137/192 (71%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341
||| ||||| ||||| || || | || || | || || || ||||| || || |||||
Sbjct 499950 TTCCTTTTGAATATTGTAATCAGAAAGAGTTCTGCCATCCTCCAATTGCTTACCGGCGAA 499891
Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401
|||| | || || | ||| || ||||| || || || || || | || |||||
Sbjct 499890 AATCAATCTTTGCTGGTCAGGTGGAATACCTTCCTTGTCTTGAATCTTGGACTTAACGTT 499831
Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461
|| || | ||| ||||| ||||| | ||||| ||||| ||||| |||||||||||
Sbjct 499830 GTCGATGGTATCAGAGGATTCGACTTCCAAGGTGATGGTCTTACCGGTTAGAGTCTTGAC 499771
Query 288462 GAATATCTGCAT 288473
||| ||||||||
Sbjct 499770 GAAGATCTGCAT 499759
Score = 93.3 bits (102), Expect = 1e-13
Identities = 135/191 (71%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
|| ||||| || || ||||| | ||||| | || || || ||||| || || |||||
Sbjct 499493 TCCTTTTGAATGTTGTAGTCAGAAAGCGTTCTGCCATCCTCCAATTGCTTACCGGCGAAA 499434
Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402
|||| | ||||| ||| || ||||| || || || || || | ||| |||||
Sbjct 499433 ATCAATCTTTGTTGGTCTGGTGGAATACCTTCCTTGTCTTGAATCTTGGATTTGACGTTG 499374
Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462
||||| | || || || || || | || || ||||| ||||| ||||||||||||
Sbjct 499373 TCTATCGTGTCAGAAGACTCAACCTCCAAAGTAATAGTCTTACCGGTTAGAGTCTTGACG 499314
Query 288463 AATATCTGCAT 288473
|| ||||||||
Sbjct 499313 AAGATCTGCAT 499303
Score = 89.7 bits (98), Expect = 1e-12
Identities = 135/192 (70%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341
||| ||||| ||||| || || | || || | || || || ||||| || || |||||
Sbjct 499266 TTCCTTTTGAATATTGTAATCAGAAAGAGTTCTGCCATCCTCCAATTGCTTACCGGCGAA 499207
Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401
|||| | || || | ||| || ||||| || || || || || | ||| || ||
Sbjct 499206 AATCAATCTTTGCTGGTCAGGTGGAATACCTTCCTTGTCTTGAATCTTGGATTTGACATT 499147
Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461
|| || | ||| ||||| ||||| | || || ||||| || |||| |||||||||
Sbjct 499146 GTCGATGGTATCAGAGGATTCGACTTCCAAGGTAATAGTCTTACCTGTCAAAGTCTTGAC 499087
Query 288462 GAATATCTGCAT 288473
||| ||||||||
Sbjct 499086 GAAAATCTGCAT 499075
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1179654279085424
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |