Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lachancea_20fermentati_20[genbank_20GCA_5F900074765.1_202016-10-26] 8 sequences; 10,264,457 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq4 123 6e-23 >seq4 Length=1192607 Score = 123 bits (136), Expect = 6e-23 Identities = 142/191 (74%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || |||||||| || ||||| | ||||| | || || || || || || || ||||| Sbjct 499037 TCCTTTTGGATGTTGTAGTCAGAAAGCGTTCTGCCATCCTCCAACTGCTTACCAGCGAAA 498978 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 ||||| | || || | ||| || ||||| ||||||||||| || | ||| ||||| Sbjct 498977 ATCAGTCTTTGCTGGTCAGGTGGAATACCTTCCTTATCCTGGATCTTGGATTTAACGTTG 498918 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || || | ||| ||||| ||||| | ||||| ||||| ||||| |||||||||||| Sbjct 498917 TCGATGGTATCAGAGGATTCGACTTCCAAGGTGATGGTCTTACCGGTTAGAGTCTTGACG 498858 Query 288463 AATATCTGCAT 288473 || |||||||| Sbjct 498857 AAGATCTGCAT 498847 Score = 118 bits (130), Expect = 3e-21 Identities = 142/193 (74%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||| ||||| ||||| || || | || || | || || || || || || || ||||| Sbjct 498810 TTCCTTTTGAATATTGTAATCAGAAAGAGTTCTGCCATCCTCCAACTGCTTACCAGCGAA 498751 Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401 |||| | |||||| | ||| || ||||| ||||||||||| || | ||| ||||| Sbjct 498750 AATCAATCTTTGTTGATCAGGTGGAATACCTTCCTTATCCTGGATCTTGGATTTGACGTT 498691 Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461 || || | ||| ||||| || || || ||||| ||||| ||||| | ||||||||| Sbjct 498690 GTCGATGGTATCAGAGGATTCAACCTCCAGAGTGATGGTCTTGCCGGTTAAAGTCTTGAC 498631 Query 288462 GAATATCTGCATT 288474 ||| ||||||||| Sbjct 498630 GAAAATCTGCATT 498618 Score = 104 bits (114), Expect = 6e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| | ||||| | || | || | |||| || |||||||| || ||||| | Sbjct 499757 CCACCTCTTAGTCTCAAAACCAAGTGGAGCGTGGACTCCTTTTGGATGTTGTAGTCAGAA 499698 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 ||||| | || || || || || || || ||||| ||||| | || || | |||| Sbjct 499697 AGCGTTCTGCCATCCTCCAACTGCTTACCGGCGAAAATCAGTCTTTGCTGGTCAGGTGGG 499638 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || ||||| || || || || || | ||| ||||| ||||| | || || || || Sbjct 499637 ATACCTTCCTTGTCTTGAATCTTGGATTTAACGTTGTCTATCGTGTCAGAAGACTCAACC 499578 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || | ||||| ||||| ||||| | |||||||||||| |||||||| Sbjct 499577 TCCAAAGTGATGGTCTTACCGGTTAAAGTCTTGACGAAAATCTGCAT 499531 Score = 98.7 bits (108), Expect = 2e-15 Identities = 137/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||| ||||| ||||| || || | || || | || || || ||||| || || ||||| Sbjct 499950 TTCCTTTTGAATATTGTAATCAGAAAGAGTTCTGCCATCCTCCAATTGCTTACCGGCGAA 499891 Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401 |||| | || || | ||| || ||||| || || || || || | || ||||| Sbjct 499890 AATCAATCTTTGCTGGTCAGGTGGAATACCTTCCTTGTCTTGAATCTTGGACTTAACGTT 499831 Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461 || || | ||| ||||| ||||| | ||||| ||||| ||||| ||||||||||| Sbjct 499830 GTCGATGGTATCAGAGGATTCGACTTCCAAGGTGATGGTCTTACCGGTTAGAGTCTTGAC 499771 Query 288462 GAATATCTGCAT 288473 ||| |||||||| Sbjct 499770 GAAGATCTGCAT 499759 Score = 93.3 bits (102), Expect = 1e-13 Identities = 135/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || ||||| || || ||||| | ||||| | || || || ||||| || || ||||| Sbjct 499493 TCCTTTTGAATGTTGTAGTCAGAAAGCGTTCTGCCATCCTCCAATTGCTTACCGGCGAAA 499434 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 |||| | ||||| ||| || ||||| || || || || || | ||| ||||| Sbjct 499433 ATCAATCTTTGTTGGTCTGGTGGAATACCTTCCTTGTCTTGAATCTTGGATTTGACGTTG 499374 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 ||||| | || || || || || | || || ||||| ||||| |||||||||||| Sbjct 499373 TCTATCGTGTCAGAAGACTCAACCTCCAAAGTAATAGTCTTACCGGTTAGAGTCTTGACG 499314 Query 288463 AATATCTGCAT 288473 || |||||||| Sbjct 499313 AAGATCTGCAT 499303 Score = 89.7 bits (98), Expect = 1e-12 Identities = 135/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||| ||||| ||||| || || | || || | || || || ||||| || || ||||| Sbjct 499266 TTCCTTTTGAATATTGTAATCAGAAAGAGTTCTGCCATCCTCCAATTGCTTACCGGCGAA 499207 Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401 |||| | || || | ||| || ||||| || || || || || | ||| || || Sbjct 499206 AATCAATCTTTGCTGGTCAGGTGGAATACCTTCCTTGTCTTGAATCTTGGATTTGACATT 499147 Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461 || || | ||| ||||| ||||| | || || ||||| || |||| ||||||||| Sbjct 499146 GTCGATGGTATCAGAGGATTCGACTTCCAAGGTAATAGTCTTACCTGTCAAAGTCTTGAC 499087 Query 288462 GAATATCTGCAT 288473 ||| |||||||| Sbjct 499086 GAAAATCTGCAT 499075 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179654279085424