Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lachancea_20fermentati_20[genbank_20GCA_5F900074765.1_202016-10-26] 8 sequences; 10,264,457 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq2 131 2e-25 seq7 113 4e-20 >seq2 Length=1086951 Score = 131 bits (144), Expect = 2e-25 Identities = 466/727 (64%), Gaps = 6/727 (1%) Strand=Plus/Minus Query 93907 TTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGATGACGAACAAGGCC 93966 |||||||| || || || || ||||||||||| ||||||||| | | | || | Sbjct 390930 TTCAACGCCGGTACTCCTCATCCTCAGATGTCTTCCTGTTTCCTGGTAGCCATGAAAGAG 390871 Query 93967 GACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATCTCAAAATACGCG 94026 ||||||||| || || | ||| | | || || ||||| | ||||| || ||| Sbjct 390870 GACTCCATCGAAGGTATCTACGATACTTTGAAAGAATGTGCCATGATCTCCAAGACTGCG 390811 Query 94027 GGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTACATCCGCGGTACC 94086 || || ||||| | ||||| || | ||| | | || |||||||| |||||| Sbjct 390810 GGCGGTATCGGATTGCACATCCACAACATTCGTTCTACAGGCTCCTACATTGCAGGTACC 390751 Query 94087 AATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACGCGGCGCGCTAC 94146 || || || || || || | |||| ||| | || || | ||||||| | || || ||| Sbjct 390750 AACGGTACTTCGAATGGTATTATCCCCATGGTTCGTGTATACAACAACACTGCTCGTTAC 390691 Query 94147 GTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTCGAGCCCTGGCAC 94206 || || || ||||| | ||| ||| |||| || | || | || || |||||| Sbjct 390690 GTTGATCAAGGTGGCAACAAGAGACCAGGTGCTTTTGCAATTTACTTAGAACCATGGCAC 390631 Query 94207 GCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGATCTGGAGA---GG 94263 | || | | || ||||| | || || |||||||| || || || | | Sbjct 390630 TCTGATATCTTCGACTTTGTCGACATCCGGAAAAACCACGGTAAGGA---AGAAATCCGT 390574 Query 94264 GCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGCGTCGAGAAA 94323 |||||||| | ||| ||||| ||||| ||||| | || ||||| | || | | Sbjct 390573 GCCAGAGATTTGTTCCCTGCTCTATGGGTTCCAGATTTGTTCATGAAGAGAGTTCAAGAG 390514 Query 94324 AACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCGACGTTTGTGGA 94383 ||| | |||| | |||| || | |||| |||||| || |||| || | ||| Sbjct 390513 AACGGTGAATGGACCTTGTTTTCCCCTAGTGAAGCTCCCGGTCTTGCCGATGTCTATGGT 390454 Query 94384 TCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGGCAAGGCCAGGAAGGTTATG 94443 || |||| || |||| ||||||| ||||| | || ||| ||| Sbjct 390453 GATGAATTCGAAGCTTTATATGAACGTTACGTGCAAGAGGGCCGTGGTAGAAAGACTATC 390394 Query 94444 GATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGACGGGTACGCCCTAC 94503 | ||| |||||| ||| || || | || | ||| ||| || ||||| || | | Sbjct 390393 AAAGCTCAGAAGCTATGGTATGCCATTCTAGAAGCTCAGACGGAAACCGGTACTCCATTC 390334 Query 94504 ATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCACCTCGGGGTGATCAAG 94563 || | | ||| || ||| ||| ||||| ||||| || |||| || |||||| Sbjct 390333 ATGATTTACAAAGATTCTTGTAACAGAAAGTCTAACCAAAAGAACCTTGGTACCATCAAG 390274 Query 94564 AGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACGAGATTGCTGTGTGT 94623 || || |||| || || |||||||| |||| || || || | ||| |||||| Sbjct 390273 TCTTCTAACTTGTGTTGTGAAATCGTCGAGTACTCTTCCCCAGAGGAAACTGCCGTGTGT 390214 Query 94624 AACCTGG 94630 ||| ||| Sbjct 390213 AACTTGG 390207 >seq7 Length=1626734 Score = 113 bits (124), Expect = 4e-20 Identities = 186/266 (70%), Gaps = 2/266 (1%) Strand=Plus/Minus Query 94081 GGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACGCGGCG 94140 ||| | |||||||| || || || || || |||||||| || || ||||||||| | || Sbjct 862286 GGTTCAAATGGCACTTCGAATGGTCTGGTTCCTATGCTACGTGTTTTCAACAACACAGCT 862227 Query 94141 CGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTC-TTTCGCGGTCTATCTCGAGCC 94199 |||||||| || || ||||| | |||| |||| | ||| || | || || ||||| Sbjct 862226 CGCTACGTTGATCAAGGTGGGAATAAGAGGCCGGGTGCCTTTTGCA-TATACCTAGAGCC 862168 Query 94200 CTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGATCTGGA 94259 ||||| ||| | | || | | || || |||||||| || || || Sbjct 862167 TTGGCATTGTGACATTTTTGACTTTTTACAACTTCGGAAGAACCATGGAAAAGAAGAATT 862108 Query 94260 GAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGCGTCGA 94319 ||| || | || || ||||| ||||||||| | || ||| | |||||||| ||||| || Sbjct 862107 GAGAGCACGGGATCTTTTCTATGCTCTCTGGATTCCTGACTTATTTATGAAGCGCGTTGA 862048 Query 94320 GAAAAACTCCGCCTGGAGTCTTTTTT 94345 ||| || | |||||||||||||| Sbjct 862047 GAATAATGAAGACTGGAGTCTTTTTT 862022 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494723150527680