Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lachancea_20fermentati_20[genbank_20GCA_5F900074765.1_202016-10-26]
8 sequences; 10,264,457 total letters
Query= NC_011345.1
Length=155122
Score E
Sequences producing significant alignments: (Bits) Value
seq4 98.7 1e-15
seq6 91.5 1e-13
seq8 87.8 2e-12
>seq4
Length=1192607
Score = 98.7 bits (108), Expect = 1e-15
Identities = 155/216 (72%), Gaps = 6/216 (3%)
Strand=Plus/Minus
Query 138402 CAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTAC-GCGAGT 138460
|||||| ||||||| | ||||||||||||||||||||||| | || | || | |
Sbjct 499515 CAAAACCAAATGTAAAGTAGACTCCTTTTGAATGTTGTAGTCAGAAAGCGTTCTGCCA-T 499457
Query 138461 CCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGT 138520
|||| | ||| ||||||| | || | | |||||||| || || |||||||| ||||
Sbjct 499456 CCTCCAATTGCTTACCGGCGAAAATCAATCTTTGTTGGTCTGGTGGAATACCTTCCTTGT 499397
Query 138521 CGGTGATTTTTTGTTTTAA--TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAG 138578
| ||| | || | ||| | ||| || | ||||| | ||||| ||||| | || |
Sbjct 499396 C-TTGAATCTTGGATTTGACGTTG-TCTATCGTGTCAGAAGACTCAACCTCCAAAGTAAT 499339
Query 138579 CGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
|| ||||| || ||||| || || || ||||||||
Sbjct 499338 AGTCTTACCGGTTAGAGTCTTGACGAAGATCTGCAT 499303
Score = 84.2 bits (92), Expect = 2e-11
Identities = 152/216 (70%), Gaps = 6/216 (3%)
Strand=Plus/Minus
Query 138402 CAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTAC-GCGAGT 138460
|||||| || || | | ||||||||||| ||||||||||| | || | || | |
Sbjct 499743 CAAAACCAAGTGGAGCGTGGACTCCTTTTGGATGTTGTAGTCAGAAAGCGTTCTGCCA-T 499685
Query 138461 CCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGT 138520
|||| | || ||||||| | || || | || ||||| || || |||||||| ||||
Sbjct 499684 CCTCCAACTGCTTACCGGCGAAAATCAGTCTTTGCTGGTCAGGTGGGATACCTTCCTTGT 499625
Query 138521 CGGTGATTTTTTGTTTTAA--TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAG 138578
| ||| | || | ||||| |||| | | ||||| | ||||| ||||| | || |
Sbjct 499624 CT-TGAATCTTGGATTTAACGTTGT-CTATCGTGTCAGAAGACTCAACCTCCAAAGTGAT 499567
Query 138579 CGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
|| ||||| || | ||| || || |||||||||||
Sbjct 499566 GGTCTTACCGGTTAAAGTCTTGACGAAAATCTGCAT 499531
>seq6
Length=1504611
Score = 91.5 bits (100), Expect = 1e-13
Identities = 157/222 (71%), Gaps = 6/222 (3%)
Strand=Plus/Minus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| |||| ||| | |||||| || || | | | || |||||||||||||||||||| |
Sbjct 86299 CCACCTCTCAATCTCAAAACCAAGTGCAAGGTAGATTCCTTTTGAATGTTGTAGTCAGAC 86240
Query 138448 ATAGTAC-GCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506
| || | || | || || | ||| ||||| | | |||| | | |||||||| |||||
Sbjct 86239 AAGGTTCTGCCA-TCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGAGG 86181
Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--TTGTTCCACGGTGTCGGTCGACTCC 138564
|||||||| ||||| ||| | || | || | ||| || | |||||| | || ||
Sbjct 86180 AATACCTTCCTTGTC-TTGAATCTTAGACTTGACGTTG-TCAATGGTGTCTGAAGATTCG 86123
Query 138565 ACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAA 138606
|| || | || | || |||||||||| || || ||||||
Sbjct 86122 ACTTCCAAAGTAATGGTCTTACCAGTCAAGGTCTTCACAAAA 86081
>seq8
Length=1564113
Score = 87.8 bits (96), Expect = 2e-12
Identities = 160/229 (70%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| |||| ||| | |||||| || || | | | ||||||||||| ||||||||||| |
Sbjct 561006 CCACCTCTCAATCTCAAAACCAAGTGCAAGGTAGACTCCTTTTGGATGTTGTAGTCAGAC 561065
Query 138448 ATAGTAC-GCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506
| ||| | || | || || | ||| ||||| | | |||| | | |||||||| || ||
Sbjct 561066 AAAGTTCTGCCA-TCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGG 561124
Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATTGTTCCACGGTGTCGGTCGACTCCA 138565
||||| || ||||| ||| || || | |||| || | ||||| | ||||| |
Sbjct 561125 GATACCCTCCTTGTCTTGGATCTTGGACTTGACATTG-TCGATAGTGTCAGAAGACTCGA 561183
Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
| || | || | || ||||| || | || || |||||||| |||||
Sbjct 561184 CTTCAAGGGTAATTGTCTTACCGGTTAAGGTCTTAACAAAAATTTGCAT 561232
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496262350373760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |