Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lachancea_20fermentati_20[genbank_20GCA_5F900074765.1_202016-10-26] 8 sequences; 10,264,457 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq2 123 2e-23 seq4 122 8e-23 seq8 111 1e-19 seq6 107 2e-18 >seq2 Length=1086951 Score = 123 bits (136), Expect = 2e-23 Identities = 200/288 (69%), Gaps = 0/288 (0%) Strand=Plus/Minus Query 122889 ATCGAGGAAAAGGTCGCCGAACGTATTCAACATATGCTCATGCGCGTCGCTATAGGCGTG 122948 ||||| | || ||||| |||||| ||| ||| || ||||||| || || | || | Sbjct 391071 ATCGATGGTAAAGTCGCAGAACGTCCTCAGCATTTGATCATGCGTGTTGCCGTCGGTATC 391012 Query 122949 CACGGACGCGACATCGAAAACGCGACCGAAACTTACGATTTGATGTCTCAAAAATTTTTC 123008 ||||| ||||||||||||| | | |||||| ||| || | ||||||| || || |||| Sbjct 391011 CACGGCCGCGACATCGAAAGAGTGCTCGAAACCTACAATCTCATGTCTCTAAGATATTTC 390952 Query 123009 ACGCACGCGAGTCCCACTTTGTTCGCCGCCGGCACGAAGTTGCCTCAGTTGTCTTCGTGT 123068 || ||||| ||||| || ||| |||||| || |||||| ||||||| ||| Sbjct 390951 ACTCACGCATCGCCCACGTTATTCAACGCCGGTACTCCTCATCCTCAGATGTCTTCCTGT 390892 Query 123069 TTTTTGCTCACCTTGCGCGAAGACAGCATCACCGGTATCTATGAAACTTTGCGCGATTGC 123128 || || | || || || ||| |||| |||||||| || |||||| || || Sbjct 390891 TTCCTGGTAGCCATGAAAGAGGACTCCATCGAAGGTATCTACGATACTTTGAAAGAATGT 390832 Query 123129 GCGTTGATTTCCAAATTTGGCGGCGGCATAGGCGTGAACGTGCACGAC 123176 || |||| ||||| || ||||| || || || || | ||| || Sbjct 390831 GCCATGATCTCCAAGACTGCGGGCGGTATCGGATTGCACATCCACAAC 390784 >seq4 Length=1192607 Score = 122 bits (134), Expect = 8e-23 Identities = 160/219 (73%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 45123 AGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTA 45182 || ||||| || | ||| | || || |||||||| || || || || | ||| | Sbjct 499520 AGTCTCAAAACCAAATGTAAAGTAGACTCCTTTTGAATGTTGTAGTCAGAAAGCGTTCTG 499461 Query 45183 GAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCT 45242 ||| |||||||| || || ||| | ||||||| ||| ||||| || ||||| ||||| Sbjct 499460 CCATCCTCCAATTGCTTACCGGCGAAAATCAATCTTTGTTGGTCTGGTGGAATACCTTCC 499401 Query 45243 TTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGT 45301 || |||||||| || ||||| || | |||| ||||| |||||||| || || | ||| Sbjct 499400 TTGTCTTGAATCTTGGATTTGA-CGTTGTCTATCGTGTCAGAAGACTCAACCTCCAAAGT 499342 Query 45302 AACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || || ||||||||||| || || || || ||||| Sbjct 499341 AATAGTCTTACCGGTTAGAGTCTTGACGAAGATCTGCAT 499303 Score = 118 bits (130), Expect = 1e-21 Identities = 159/219 (73%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 45123 AGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTA 45182 |||||||| || || || | || ||||||||||| ||||| ||||| | ||| | Sbjct 498836 AGCCTCAAAACCAGGTGTAAGGTAGATTCCTTTTGAATATTGTAATCAGAAAGAGTTCTG 498777 Query 45183 GAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCT 45242 ||| ||||| || || || ||| | ||||||| ||| || || || ||||| ||||| Sbjct 498776 CCATCCTCCAACTGCTTACCAGCGAAAATCAATCTTTGTTGATCAGGTGGAATACCTTCC 498717 Query 45243 TTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGT 45301 ||||| || || || ||||| || | || | ||| || || || || || || ||||| Sbjct 498716 TTATCCTGGATCTTGGATTTGA-CGTTGTCGATGGTATCAGAGGATTCAACCTCCAGAGT 498658 Query 45302 AACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 | || |||||||||| ||| || || ||||| ||||| Sbjct 498657 GATGGTCTTGCCGGTTAAAGTCTTGACGAAAATCTGCAT 498619 Score = 118 bits (130), Expect = 1e-21 Identities = 157/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 45123 AGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTA 45182 |||||||| || | || | || ||||||||||| ||||| ||||| | ||| | Sbjct 499292 AGCCTCAAAACCAAGTGTAAGGTAGATTCCTTTTGAATATTGTAATCAGAAAGAGTTCTG 499233 Query 45183 GAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCT 45242 ||| |||||||| || || ||| | ||||||| ||||||||| || ||||| ||||| Sbjct 499232 CCATCCTCCAATTGCTTACCGGCGAAAATCAATCTTTGCTGGTCAGGTGGAATACCTTCC 499173 Query 45243 TTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTA 45302 || |||||||| || ||||| || | ||| || || || |||||||| | ||| Sbjct 499172 TTGTCTTGAATCTTGGATTTGACATTGTCGATGGTATCAGAGGATTCGACTTCCAAGGTA 499113 Query 45303 ACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 | || || || || | ||| || || ||||| ||||| Sbjct 499112 ATAGTCTTACCTGTCAAAGTCTTGACGAAAATCTGCAT 499075 Score = 113 bits (124), Expect = 4e-20 Identities = 158/219 (72%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 45123 AGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTA 45182 || ||||| || | || ||||| || ||||||||||| || || || | ||| | Sbjct 499748 AGTCTCAAAACCAAGTGGAGCGTGGACTCCTTTTGGATGTTGTAGTCAGAAAGCGTTCTG 499689 Query 45183 GAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCT 45242 ||| ||||| || || || ||| | |||| || ||||||||| || || || ||||| Sbjct 499688 CCATCCTCCAACTGCTTACCGGCGAAAATCAGTCTTTGCTGGTCAGGTGGGATACCTTCC 499629 Query 45243 TTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGT 45301 || ||||||| | || | || | || | |||| ||||| |||||||| || || | ||| Sbjct 499628 TTGTCTTGAA-TCTTGGATTTAACGTTGTCTATCGTGTCAGAAGACTCAACCTCCAAAGT 499570 Query 45302 AACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 | || || ||||||| ||| || || ||||| ||||| Sbjct 499569 GATGGTCTTACCGGTTAAAGTCTTGACGAAAATCTGCAT 499531 Score = 113 bits (124), Expect = 4e-20 Identities = 156/216 (72%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185 ||||| || | || | || ||||||||||| ||||| ||||| | ||| | | Sbjct 499973 CTCAAAACCAAGTGTAAGGTAGATTCCTTTTGAATATTGTAATCAGAAAGAGTTCTGCCA 499914 Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245 || |||||||| || || ||| | ||||||| ||||||||| || ||||| ||||| || Sbjct 499913 TCCTCCAATTGCTTACCGGCGAAAATCAATCTTTGCTGGTCAGGTGGAATACCTTCCTTG 499854 Query 45246 TCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAAC 45304 ||||||| | || | | | || | || | ||| || || || |||||||| | || | Sbjct 499853 TCTTGAA-TCTTGGACTTAACGTTGTCGATGGTATCAGAGGATTCGACTTCCAAGGTGAT 499795 Query 45305 CGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || ||||||||||| || || || || ||||| Sbjct 499794 GGTCTTACCGGTTAGAGTCTTGACGAAGATCTGCAT 499759 Score = 100 bits (110), Expect = 3e-16 Identities = 155/219 (71%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 45123 AGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTA 45182 || ||||| || | ||| | || || ||||||||||| || || || | ||| | Sbjct 499064 AGTCTCAAAACCAAATGTAAAGTAGACTCCTTTTGGATGTTGTAGTCAGAAAGCGTTCTG 499005 Query 45183 GAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCT 45242 ||| ||||| || || || ||| | |||| || ||||||||| || ||||| ||||| Sbjct 499004 CCATCCTCCAACTGCTTACCAGCGAAAATCAGTCTTTGCTGGTCAGGTGGAATACCTTCC 498945 Query 45243 TTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGT 45301 ||||| || || || ||| | || | || | ||| || || || |||||||| | || Sbjct 498944 TTATCCTGGATCTTGGATTTAA-CGTTGTCGATGGTATCAGAGGATTCGACTTCCAAGGT 498886 Query 45302 AACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 | || || ||||||||||| || || || || ||||| Sbjct 498885 GATGGTCTTACCGGTTAGAGTCTTGACGAAGATCTGCAT 498847 >seq8 Length=1564113 Score = 111 bits (122), Expect = 1e-19 Identities = 154/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185 ||||| || | |||| || || ||||||||||| || || || | ||| | | Sbjct 561018 CTCAAAACCAAGTGCAAGGTAGACTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTGCCA 561077 Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245 || |||||||| || || || | ||||||| ||| ||||| || || || || || || Sbjct 561078 TCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCCTCCTTG 561137 Query 45246 TCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACC 45305 ||||| || || |||| || | ||||| |||||||||||||| || |||| Sbjct 561138 TCTTGGATCTTGGACTTGACATTGTCGATAGTGTCAGAAGACTCGACTTCAAGGGTAATT 561197 Query 45306 GTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341 || || ||||||| || || ||||||||||||||| Sbjct 561198 GTCTTACCGGTTAAGGTCTTAACAAAAATTTGCATC 561233 >seq6 Length=1504611 Score = 107 bits (118), Expect = 2e-18 Identities = 150/208 (72%), Gaps = 2/208 (1%) Strand=Plus/Minus Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185 ||||| || | |||| || ||||||||||| || || || || | |||| | | Sbjct 86287 CTCAAAACCAAGTGCAAGGTAGATTCCTTTTGAATGTTGTAGTCAGACAAGGTTCTGCCA 86228 Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245 || |||||||| || || || | ||||||| ||| ||||| || ||||| ||||| || Sbjct 86227 TCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGAGGAATACCTTCCTTG 86168 Query 45246 TCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAAC 45304 |||||||| || |||| || | || | |||||| ||||| |||||||| | ||||| Sbjct 86167 TCTTGAATCTTAGACTTGA-CGTTGTCAATGGTGTCTGAAGATTCGACTTCCAAAGTAAT 86109 Query 45305 CGTTTTGCCGGTTAGAGTTTTTACAAAA 45332 || || || || | || || |||||| Sbjct 86108 GGTCTTACCAGTCAAGGTCTTCACAAAA 86081 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 452003154799680