Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lachancea_20fermentati_20[genbank_20GCA_5F900074765.1_202016-10-26]
8 sequences; 10,264,457 total letters
Query= NC_012639.1
Length=141291
Score E
Sequences producing significant alignments: (Bits) Value
seq2 123 2e-23
seq4 122 8e-23
seq8 111 1e-19
seq6 107 2e-18
>seq2
Length=1086951
Score = 123 bits (136), Expect = 2e-23
Identities = 200/288 (69%), Gaps = 0/288 (0%)
Strand=Plus/Minus
Query 122889 ATCGAGGAAAAGGTCGCCGAACGTATTCAACATATGCTCATGCGCGTCGCTATAGGCGTG 122948
||||| | || ||||| |||||| ||| ||| || ||||||| || || | || |
Sbjct 391071 ATCGATGGTAAAGTCGCAGAACGTCCTCAGCATTTGATCATGCGTGTTGCCGTCGGTATC 391012
Query 122949 CACGGACGCGACATCGAAAACGCGACCGAAACTTACGATTTGATGTCTCAAAAATTTTTC 123008
||||| ||||||||||||| | | |||||| ||| || | ||||||| || || ||||
Sbjct 391011 CACGGCCGCGACATCGAAAGAGTGCTCGAAACCTACAATCTCATGTCTCTAAGATATTTC 390952
Query 123009 ACGCACGCGAGTCCCACTTTGTTCGCCGCCGGCACGAAGTTGCCTCAGTTGTCTTCGTGT 123068
|| ||||| ||||| || ||| |||||| || |||||| ||||||| |||
Sbjct 390951 ACTCACGCATCGCCCACGTTATTCAACGCCGGTACTCCTCATCCTCAGATGTCTTCCTGT 390892
Query 123069 TTTTTGCTCACCTTGCGCGAAGACAGCATCACCGGTATCTATGAAACTTTGCGCGATTGC 123128
|| || | || || || ||| |||| |||||||| || |||||| || ||
Sbjct 390891 TTCCTGGTAGCCATGAAAGAGGACTCCATCGAAGGTATCTACGATACTTTGAAAGAATGT 390832
Query 123129 GCGTTGATTTCCAAATTTGGCGGCGGCATAGGCGTGAACGTGCACGAC 123176
|| |||| ||||| || ||||| || || || || | ||| ||
Sbjct 390831 GCCATGATCTCCAAGACTGCGGGCGGTATCGGATTGCACATCCACAAC 390784
>seq4
Length=1192607
Score = 122 bits (134), Expect = 8e-23
Identities = 160/219 (73%), Gaps = 2/219 (1%)
Strand=Plus/Minus
Query 45123 AGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTA 45182
|| ||||| || | ||| | || || |||||||| || || || || | ||| |
Sbjct 499520 AGTCTCAAAACCAAATGTAAAGTAGACTCCTTTTGAATGTTGTAGTCAGAAAGCGTTCTG 499461
Query 45183 GAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCT 45242
||| |||||||| || || ||| | ||||||| ||| ||||| || ||||| |||||
Sbjct 499460 CCATCCTCCAATTGCTTACCGGCGAAAATCAATCTTTGTTGGTCTGGTGGAATACCTTCC 499401
Query 45243 TTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGT 45301
|| |||||||| || ||||| || | |||| ||||| |||||||| || || | |||
Sbjct 499400 TTGTCTTGAATCTTGGATTTGA-CGTTGTCTATCGTGTCAGAAGACTCAACCTCCAAAGT 499342
Query 45302 AACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|| || || ||||||||||| || || || || |||||
Sbjct 499341 AATAGTCTTACCGGTTAGAGTCTTGACGAAGATCTGCAT 499303
Score = 118 bits (130), Expect = 1e-21
Identities = 159/219 (73%), Gaps = 2/219 (1%)
Strand=Plus/Minus
Query 45123 AGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTA 45182
|||||||| || || || | || ||||||||||| ||||| ||||| | ||| |
Sbjct 498836 AGCCTCAAAACCAGGTGTAAGGTAGATTCCTTTTGAATATTGTAATCAGAAAGAGTTCTG 498777
Query 45183 GAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCT 45242
||| ||||| || || || ||| | ||||||| ||| || || || ||||| |||||
Sbjct 498776 CCATCCTCCAACTGCTTACCAGCGAAAATCAATCTTTGTTGATCAGGTGGAATACCTTCC 498717
Query 45243 TTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGT 45301
||||| || || || ||||| || | || | ||| || || || || || || |||||
Sbjct 498716 TTATCCTGGATCTTGGATTTGA-CGTTGTCGATGGTATCAGAGGATTCAACCTCCAGAGT 498658
Query 45302 AACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
| || |||||||||| ||| || || ||||| |||||
Sbjct 498657 GATGGTCTTGCCGGTTAAAGTCTTGACGAAAATCTGCAT 498619
Score = 118 bits (130), Expect = 1e-21
Identities = 157/218 (72%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 45123 AGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTA 45182
|||||||| || | || | || ||||||||||| ||||| ||||| | ||| |
Sbjct 499292 AGCCTCAAAACCAAGTGTAAGGTAGATTCCTTTTGAATATTGTAATCAGAAAGAGTTCTG 499233
Query 45183 GAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCT 45242
||| |||||||| || || ||| | ||||||| ||||||||| || ||||| |||||
Sbjct 499232 CCATCCTCCAATTGCTTACCGGCGAAAATCAATCTTTGCTGGTCAGGTGGAATACCTTCC 499173
Query 45243 TTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTA 45302
|| |||||||| || ||||| || | ||| || || || |||||||| | |||
Sbjct 499172 TTGTCTTGAATCTTGGATTTGACATTGTCGATGGTATCAGAGGATTCGACTTCCAAGGTA 499113
Query 45303 ACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
| || || || || | ||| || || ||||| |||||
Sbjct 499112 ATAGTCTTACCTGTCAAAGTCTTGACGAAAATCTGCAT 499075
Score = 113 bits (124), Expect = 4e-20
Identities = 158/219 (72%), Gaps = 2/219 (1%)
Strand=Plus/Minus
Query 45123 AGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTA 45182
|| ||||| || | || ||||| || ||||||||||| || || || | ||| |
Sbjct 499748 AGTCTCAAAACCAAGTGGAGCGTGGACTCCTTTTGGATGTTGTAGTCAGAAAGCGTTCTG 499689
Query 45183 GAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCT 45242
||| ||||| || || || ||| | |||| || ||||||||| || || || |||||
Sbjct 499688 CCATCCTCCAACTGCTTACCGGCGAAAATCAGTCTTTGCTGGTCAGGTGGGATACCTTCC 499629
Query 45243 TTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGT 45301
|| ||||||| | || | || | || | |||| ||||| |||||||| || || | |||
Sbjct 499628 TTGTCTTGAA-TCTTGGATTTAACGTTGTCTATCGTGTCAGAAGACTCAACCTCCAAAGT 499570
Query 45302 AACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
| || || ||||||| ||| || || ||||| |||||
Sbjct 499569 GATGGTCTTACCGGTTAAAGTCTTGACGAAAATCTGCAT 499531
Score = 113 bits (124), Expect = 4e-20
Identities = 156/216 (72%), Gaps = 2/216 (1%)
Strand=Plus/Minus
Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185
||||| || | || | || ||||||||||| ||||| ||||| | ||| | |
Sbjct 499973 CTCAAAACCAAGTGTAAGGTAGATTCCTTTTGAATATTGTAATCAGAAAGAGTTCTGCCA 499914
Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245
|| |||||||| || || ||| | ||||||| ||||||||| || ||||| ||||| ||
Sbjct 499913 TCCTCCAATTGCTTACCGGCGAAAATCAATCTTTGCTGGTCAGGTGGAATACCTTCCTTG 499854
Query 45246 TCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAAC 45304
||||||| | || | | | || | || | ||| || || || |||||||| | || |
Sbjct 499853 TCTTGAA-TCTTGGACTTAACGTTGTCGATGGTATCAGAGGATTCGACTTCCAAGGTGAT 499795
Query 45305 CGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|| || ||||||||||| || || || || |||||
Sbjct 499794 GGTCTTACCGGTTAGAGTCTTGACGAAGATCTGCAT 499759
Score = 100 bits (110), Expect = 3e-16
Identities = 155/219 (71%), Gaps = 2/219 (1%)
Strand=Plus/Minus
Query 45123 AGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTA 45182
|| ||||| || | ||| | || || ||||||||||| || || || | ||| |
Sbjct 499064 AGTCTCAAAACCAAATGTAAAGTAGACTCCTTTTGGATGTTGTAGTCAGAAAGCGTTCTG 499005
Query 45183 GAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCT 45242
||| ||||| || || || ||| | |||| || ||||||||| || ||||| |||||
Sbjct 499004 CCATCCTCCAACTGCTTACCAGCGAAAATCAGTCTTTGCTGGTCAGGTGGAATACCTTCC 498945
Query 45243 TTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGT 45301
||||| || || || ||| | || | || | ||| || || || |||||||| | ||
Sbjct 498944 TTATCCTGGATCTTGGATTTAA-CGTTGTCGATGGTATCAGAGGATTCGACTTCCAAGGT 498886
Query 45302 AACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
| || || ||||||||||| || || || || |||||
Sbjct 498885 GATGGTCTTACCGGTTAGAGTCTTGACGAAGATCTGCAT 498847
>seq8
Length=1564113
Score = 111 bits (122), Expect = 1e-19
Identities = 154/216 (71%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185
||||| || | |||| || || ||||||||||| || || || | ||| | |
Sbjct 561018 CTCAAAACCAAGTGCAAGGTAGACTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTGCCA 561077
Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245
|| |||||||| || || || | ||||||| ||| ||||| || || || || || ||
Sbjct 561078 TCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCCTCCTTG 561137
Query 45246 TCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACC 45305
||||| || || |||| || | ||||| |||||||||||||| || ||||
Sbjct 561138 TCTTGGATCTTGGACTTGACATTGTCGATAGTGTCAGAAGACTCGACTTCAAGGGTAATT 561197
Query 45306 GTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341
|| || ||||||| || || |||||||||||||||
Sbjct 561198 GTCTTACCGGTTAAGGTCTTAACAAAAATTTGCATC 561233
>seq6
Length=1504611
Score = 107 bits (118), Expect = 2e-18
Identities = 150/208 (72%), Gaps = 2/208 (1%)
Strand=Plus/Minus
Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185
||||| || | |||| || ||||||||||| || || || || | |||| | |
Sbjct 86287 CTCAAAACCAAGTGCAAGGTAGATTCCTTTTGAATGTTGTAGTCAGACAAGGTTCTGCCA 86228
Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245
|| |||||||| || || || | ||||||| ||| ||||| || ||||| ||||| ||
Sbjct 86227 TCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGAGGAATACCTTCCTTG 86168
Query 45246 TCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAAC 45304
|||||||| || |||| || | || | |||||| ||||| |||||||| | |||||
Sbjct 86167 TCTTGAATCTTAGACTTGA-CGTTGTCAATGGTGTCTGAAGATTCGACTTCCAAAGTAAT 86109
Query 45305 CGTTTTGCCGGTTAGAGTTTTTACAAAA 45332
|| || || || | || || ||||||
Sbjct 86108 GGTCTTACCAGTCAAGGTCTTCACAAAA 86081
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 452003154799680
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