Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lachancea_20fermentati_20[genbank_20GCA_5F900074765.1_202016-10-26] 8 sequences; 10,264,457 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq2 233 2e-56 >seq2 Length=1086951 Score = 233 bits (258), Expect = 2e-56 Identities = 869/1340 (65%), Gaps = 39/1340 (3%) Strand=Plus/Plus Query 115903 TAGATGTTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAG 115962 || ||||| | || ||||| || || || || |||| ||||||||| |||| || ||| Sbjct 389657 TACATGTTTGAGGTATATGGTTCGAAACATTCGTTGTAACCCAAGATCTGGGAAGTAGAG 389716 Query 115963 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTGCGGAGACCCACCCCCCTAATGCGTTCC 116022 || || ||||| || || | | || ||| | | ||| | ||||| | | Sbjct 389717 GCAGTTGGCATTGGGGCTAGCAACAGAGAGTTTCTAATACCGTCTTTGATAATGTCTGCT 389776 Query 116023 TTGAGGGCGTCCCAGTCG--TAGTTGAGCTTTGTCTCCCCCTCCCACATATCAAACTGGA 116080 | | | ||||| || ||| | || | || ||| | ||||||| ||||| || | Sbjct 389777 CTCAAAGTTTCCCAATCCCATAGATCAG-TAGGTGTCCTGC-CCCACATGTCAAATTGAA 389834 Query 116081 GGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCA 116140 | ||||| | || || || ||||||| |||||||| ||||||||||| || |||| Sbjct 389835 GAATACCCTCGGCAGCAGGGGATCCCTTGAATGTCTCGTATGGGCCCTCTTCCAGGGCCA 389894 Query 116141 ATTCG-GAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATT 116199 | ||| | | | ||||| ||||| ||||||||||| |||||||| | | || ||||| | Sbjct 389895 ACTCGTGTGAT-GCCTCTAGGGCAGCGTGATACATAGTCTCAAAGACGTGAATATTCAAT 389953 Query 116200 GCCTTGGCCTCGTCGGAATCAAACGCGAGACGGCACAAAATAAATACATCCGCGAGACCT 116259 | |||||||| | || || || | | ||| ||| || || ||| || | ||| Sbjct 389954 TCTTTGGCCTCCTGAGAGTCGAAAGGAATACGCAACATCATGAAAGTATCGGCCAACCCT 390013 Query 116260 TGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCCACGGGA 116319 || ||||| | |||| || | |||||||| || || ||| || || || |||||| Sbjct 390014 TGAACACCCAAAGCAATAGGTCTGTGTCTCATGTTGGATCTTCTGGCAGTTTCAACGGGA 390073 Query 116320 TAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGA 116379 ||| | || | ||||| || || || | ||| |||||||||||| | |||||||| Sbjct 390074 TAATAGTTACGGTCGATGACTCTGTTCAAATTACGGGTGACAACCTTGGAAATTTCATGT 390133 Query 116380 AGCTTTTCGTAATCAAAACTGCGAGTC------TCTTCA-----TTGA---CATACTTAG 116425 ||||| || | | | | ||||| |||||| || | || || | Sbjct 390134 AGCTTCTCAAAGTTGTACCATTGAGTCTTTCCGTCTTCAGAAGTTTCAATGAATGCT--G 390191 Query 116426 GAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAA 116485 | | || | || |||| |||||||| | || || || || |||||| | | Sbjct 390192 GCAATGCAACAGAAGCCAAGTTACACACGGCAGTTTCCTCTGGGGAAGAGTACTCGACGA 390251 Query 116486 TTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGT 116545 |||| |||||| || ||| ||| ||||| || | ||||||||| || |||||| ||| Sbjct 390252 TTTCACAACACAAGTTAGAAGACTTGATGGTACCAAGGTTCTTTTGGTTAGACTTTCTGT 390311 Query 116546 TACACGCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAG 116605 |||| | ||| ||||| | ||| |||| || || || ||||| || | | ||||| | Sbjct 390312 TACAAGAATCTTTGTAAATCATGAATGGAGTACCGGTTTCCGTCTGAGCTTCTAGAATGG 390371 Query 116606 CCTTCCATA-CATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTT 116664 | | ||||| | || | ||| | ||| | | || ||||| | | |||| | Sbjct 390372 CATACCATAGCTTCTG-AGCTTTGATAGTCTTTCTACCACGGCCCTCTTGCACGTAACGT 390430 Query 116665 GTGTAGAGGGCCTCAAACTCTTCACCCACAG-CCTCTGAGAGCCCTGGTGCCTTATCTGG 116723 || | || || || || ||| ||| || | || | || || || || | | || Sbjct 390431 TCATATAAAGCTTCGAATTCATCA-CCATAGACATCGGCAAGACCGGGAGCTTCACTAGG 390489 Query 116724 ACAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCA 116783 | || | | ||||| ||| ||| | ||| | ||||||||| | ||||| | ||| Sbjct 390490 GGAAAACAAGGTCCATTCACCGTTCTCTTGAACTCTCTTCATGAACAAATCTGGAACCCA 390549 Query 116784 GAGCGCCGAGAAGAGATC-CCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACT 116842 || || | ||| | ||| | | || || |||||| | || || || || | | Sbjct 390550 TAGAGCAGGGAACAAATCTCTGGCA-CGGATTTCTTCCTTACCGTGGTTTTTCCGGATGT 390608 Query 116843 CCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTGC 116902 | | |||||| | |||||| | |||||| ||||| | ||| | || | | | ||| | Sbjct 390609 CGACAAAGTCGAAGATATCAGAGTGCCATGGTTCTAAGTAAATTGCAAAAG-CACCTGGT 390667 Query 116903 GAC----GACCAGCCTGGTTTACATACCTCGCCGTTGCGTTAAATACGCGAAGCATTGGA 116958 | ||| | || | || || | || || ||| |||| |||| ||| || Sbjct 390668 CTCTTGTTGCCACCTTGATCAACGTAACGAGCAGTGTTGTTGTATACACGAACCATGGGG 390727 Query 116959 ATGATACCATCAGATTGGCCATTTGTCCCCCGAA--TACGAGACTTGTTGGCTCTGACAT 117016 || ||||||| || || || || || || || ||| || | | | | | Sbjct 390728 ATAATACCATTCGAAGTACCGTTGGTACCTGCAATGTAGGAGCCT--GTAGAACGAATGT 390785 Query 117017 CGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGAGAC 117076 ||||||||||| || ||||| || || ||| ||||| || || || | | | Sbjct 390786 TGTGGATGTGCAATCCGATACCGCCCGCAGTCTTGGAGATCATGGCACATTCTTTCAAAG 390845 Query 117077 TGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTT 117136 | ||||||| || ||||| ||||| | || | || | ||||| ||| ||||| | Sbjct 390846 TATCGTAGATACCTTCGATGGAGTCCTCTTTCATGGCTACCAGGAAACAGGAAGACATCT 390905 Query 117137 GTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCTT-GG 117195 | || || ||||| |||||||| | || || | ||||| |||| ||| ||| | Sbjct 390906 GAGGATGAGGAGTACCGGCGTTGAATAACGTGGGCGATGCGTGAGTGAA-ATATCTTAGA 390964 Query 117196 GACATCTTATCGTAGGTCTC 117215 ||||| || |||||| || Sbjct 390965 GACATGAGATTGTAGGTTTC 390984 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613507138649280