Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lachancea_20fermentati_20[genbank_20GCA_5F900074765.1_202016-10-26]
8 sequences; 10,264,457 total letters
Query= NC_013288.1
Length=191761
Score E
Sequences producing significant alignments: (Bits) Value
seq2 233 2e-56
>seq2
Length=1086951
Score = 233 bits (258), Expect = 2e-56
Identities = 869/1340 (65%), Gaps = 39/1340 (3%)
Strand=Plus/Plus
Query 115903 TAGATGTTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAG 115962
|| ||||| | || ||||| || || || || |||| ||||||||| |||| || |||
Sbjct 389657 TACATGTTTGAGGTATATGGTTCGAAACATTCGTTGTAACCCAAGATCTGGGAAGTAGAG 389716
Query 115963 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTGCGGAGACCCACCCCCCTAATGCGTTCC 116022
|| || ||||| || || | | || ||| | | ||| | ||||| | |
Sbjct 389717 GCAGTTGGCATTGGGGCTAGCAACAGAGAGTTTCTAATACCGTCTTTGATAATGTCTGCT 389776
Query 116023 TTGAGGGCGTCCCAGTCG--TAGTTGAGCTTTGTCTCCCCCTCCCACATATCAAACTGGA 116080
| | | ||||| || ||| | || | || ||| | ||||||| ||||| || |
Sbjct 389777 CTCAAAGTTTCCCAATCCCATAGATCAG-TAGGTGTCCTGC-CCCACATGTCAAATTGAA 389834
Query 116081 GGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCA 116140
| ||||| | || || || ||||||| |||||||| ||||||||||| || ||||
Sbjct 389835 GAATACCCTCGGCAGCAGGGGATCCCTTGAATGTCTCGTATGGGCCCTCTTCCAGGGCCA 389894
Query 116141 ATTCG-GAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATT 116199
| ||| | | | ||||| ||||| ||||||||||| |||||||| | | || ||||| |
Sbjct 389895 ACTCGTGTGAT-GCCTCTAGGGCAGCGTGATACATAGTCTCAAAGACGTGAATATTCAAT 389953
Query 116200 GCCTTGGCCTCGTCGGAATCAAACGCGAGACGGCACAAAATAAATACATCCGCGAGACCT 116259
| |||||||| | || || || | | ||| ||| || || ||| || | |||
Sbjct 389954 TCTTTGGCCTCCTGAGAGTCGAAAGGAATACGCAACATCATGAAAGTATCGGCCAACCCT 390013
Query 116260 TGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCCACGGGA 116319
|| ||||| | |||| || | |||||||| || || ||| || || || ||||||
Sbjct 390014 TGAACACCCAAAGCAATAGGTCTGTGTCTCATGTTGGATCTTCTGGCAGTTTCAACGGGA 390073
Query 116320 TAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGA 116379
||| | || | ||||| || || || | ||| |||||||||||| | ||||||||
Sbjct 390074 TAATAGTTACGGTCGATGACTCTGTTCAAATTACGGGTGACAACCTTGGAAATTTCATGT 390133
Query 116380 AGCTTTTCGTAATCAAAACTGCGAGTC------TCTTCA-----TTGA---CATACTTAG 116425
||||| || | | | | ||||| |||||| || | || || |
Sbjct 390134 AGCTTCTCAAAGTTGTACCATTGAGTCTTTCCGTCTTCAGAAGTTTCAATGAATGCT--G 390191
Query 116426 GAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAA 116485
| | || | || |||| |||||||| | || || || || |||||| | |
Sbjct 390192 GCAATGCAACAGAAGCCAAGTTACACACGGCAGTTTCCTCTGGGGAAGAGTACTCGACGA 390251
Query 116486 TTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGT 116545
|||| |||||| || ||| ||| ||||| || | ||||||||| || |||||| |||
Sbjct 390252 TTTCACAACACAAGTTAGAAGACTTGATGGTACCAAGGTTCTTTTGGTTAGACTTTCTGT 390311
Query 116546 TACACGCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAG 116605
|||| | ||| ||||| | ||| |||| || || || ||||| || | | ||||| |
Sbjct 390312 TACAAGAATCTTTGTAAATCATGAATGGAGTACCGGTTTCCGTCTGAGCTTCTAGAATGG 390371
Query 116606 CCTTCCATA-CATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTT 116664
| | ||||| | || | ||| | ||| | | || ||||| | | |||| |
Sbjct 390372 CATACCATAGCTTCTG-AGCTTTGATAGTCTTTCTACCACGGCCCTCTTGCACGTAACGT 390430
Query 116665 GTGTAGAGGGCCTCAAACTCTTCACCCACAG-CCTCTGAGAGCCCTGGTGCCTTATCTGG 116723
|| | || || || || ||| ||| || | || | || || || || | | ||
Sbjct 390431 TCATATAAAGCTTCGAATTCATCA-CCATAGACATCGGCAAGACCGGGAGCTTCACTAGG 390489
Query 116724 ACAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCA 116783
| || | | ||||| ||| ||| | ||| | ||||||||| | ||||| | |||
Sbjct 390490 GGAAAACAAGGTCCATTCACCGTTCTCTTGAACTCTCTTCATGAACAAATCTGGAACCCA 390549
Query 116784 GAGCGCCGAGAAGAGATC-CCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACT 116842
|| || | ||| | ||| | | || || |||||| | || || || || | |
Sbjct 390550 TAGAGCAGGGAACAAATCTCTGGCA-CGGATTTCTTCCTTACCGTGGTTTTTCCGGATGT 390608
Query 116843 CCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTGC 116902
| | |||||| | |||||| | |||||| ||||| | ||| | || | | | ||| |
Sbjct 390609 CGACAAAGTCGAAGATATCAGAGTGCCATGGTTCTAAGTAAATTGCAAAAG-CACCTGGT 390667
Query 116903 GAC----GACCAGCCTGGTTTACATACCTCGCCGTTGCGTTAAATACGCGAAGCATTGGA 116958
| ||| | || | || || | || || ||| |||| |||| ||| ||
Sbjct 390668 CTCTTGTTGCCACCTTGATCAACGTAACGAGCAGTGTTGTTGTATACACGAACCATGGGG 390727
Query 116959 ATGATACCATCAGATTGGCCATTTGTCCCCCGAA--TACGAGACTTGTTGGCTCTGACAT 117016
|| ||||||| || || || || || || || ||| || | | | | |
Sbjct 390728 ATAATACCATTCGAAGTACCGTTGGTACCTGCAATGTAGGAGCCT--GTAGAACGAATGT 390785
Query 117017 CGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGAGAC 117076
||||||||||| || ||||| || || ||| ||||| || || || | | |
Sbjct 390786 TGTGGATGTGCAATCCGATACCGCCCGCAGTCTTGGAGATCATGGCACATTCTTTCAAAG 390845
Query 117077 TGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTT 117136
| ||||||| || ||||| ||||| | || | || | ||||| ||| ||||| |
Sbjct 390846 TATCGTAGATACCTTCGATGGAGTCCTCTTTCATGGCTACCAGGAAACAGGAAGACATCT 390905
Query 117137 GTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCTT-GG 117195
| || || ||||| |||||||| | || || | ||||| |||| ||| ||| |
Sbjct 390906 GAGGATGAGGAGTACCGGCGTTGAATAACGTGGGCGATGCGTGAGTGAA-ATATCTTAGA 390964
Query 117196 GACATCTTATCGTAGGTCTC 117215
||||| || |||||| ||
Sbjct 390965 GACATGAGATTGTAGGTTTC 390984
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 613507138649280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |