Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lachancea_20fermentati_20[genbank_20GCA_5F900074765.1_202016-10-26] 8 sequences; 10,264,457 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq4 122 2e-22 seq6 118 2e-21 seq8 96.9 8e-15 >seq4 Length=1192607 Score = 122 bits (134), Expect = 2e-22 Identities = 156/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 199412 AGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTT 199471 ||||||| || | || | ||| ||||||||||||| ||||||||||| | || || Sbjct 499064 AGTCTCAAAACCAAATGTAAAGTAGACTCCTTTTGGATGTTGTAGTCAGAAAGCGTTCTG 499005 Query 199472 CCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCT 199531 ||||| |||| |||||| || ||||| || || | |||||||| || ||| ||||| Sbjct 499004 CCATCCTCCAACTGCTTACCAGCGAAAATCAGTCTTTGCTGGTCAGGTGGAATACCTTCC 498945 Query 199532 CGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTG 199591 ||||| ||||| || ||| |||| ||| || | | ||| || ||||| ||| Sbjct 498944 TTATCCTGGATCTTGGATTTAACGTTGTCGATGGTATCAGAGGATTCGACTTCCAAGGTG 498885 Query 199592 ATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || |||||||| || ||||| || || || || || Sbjct 498884 ATGGTCTTACCGGTTAGAGTCTTGACGAAGATCTG 498850 Score = 122 bits (134), Expect = 2e-22 Identities = 156/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 199412 AGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTT 199471 ||||||| || | |||||| || ||||||||||||| ||||||||||| | || || Sbjct 499748 AGTCTCAAAACCAAGTGGAGCGTGGACTCCTTTTGGATGTTGTAGTCAGAAAGCGTTCTG 499689 Query 199472 CCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCT 199531 ||||| |||| |||||| |||||||| || || | |||||||| || || ||||| Sbjct 499688 CCATCCTCCAACTGCTTACCGGCGAAAATCAGTCTTTGCTGGTCAGGTGGGATACCTTCC 499629 Query 199532 CGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTG 199591 || |||||||| || ||| || | ||||| | | || || ||||| ||| Sbjct 499628 TTGTCTTGAATCTTGGATTTAACGTTGTCTATCGTGTCAGAAGACTCAACCTCCAAAGTG 499569 Query 199592 ATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || |||||||| || | ||| || || ||||| || Sbjct 499568 ATGGTCTTACCGGTTAAAGTCTTGACGAAAATCTG 499534 Score = 95.1 bits (104), Expect = 3e-14 Identities = 150/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 199412 AGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTT 199471 ||||||| || | || | ||| ||||||||||| | ||||||||||| | || || Sbjct 499520 AGTCTCAAAACCAAATGTAAAGTAGACTCCTTTTGAATGTTGTAGTCAGAAAGCGTTCTG 499461 Query 199472 CCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCT 199531 ||||| |||| ||||| |||||||| || | | || ||||| || ||| ||||| Sbjct 499460 CCATCCTCCAATTGCTTACCGGCGAAAATCAATCTTTGTTGGTCTGGTGGAATACCTTCC 499401 Query 199532 CGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTG 199591 || |||||||| || ||| || | ||||| | | || || ||||| || Sbjct 499400 TTGTCTTGAATCTTGGATTTGACGTTGTCTATCGTGTCAGAAGACTCAACCTCCAAAGTA 499341 Query 199592 ATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || |||||||| || ||||| || || || || || Sbjct 499340 ATAGTCTTACCGGTTAGAGTCTTGACGAAGATCTG 499306 >seq6 Length=1504611 Score = 118 bits (130), Expect = 2e-21 Identities = 151/208 (73%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473 ||||| || | ||| | || || |||||||| | ||||||||||| ||| || || || Sbjct 86288 TCTCAAAACCAAGTGCAAGGTAGATTCCTTTTGAATGTTGTAGTCAGACAAGGTTCTGCC 86229 Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533 |||||||| ||||| || || ||||| | | || ||||| ||| ||| ||||| Sbjct 86228 ATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGAGGAATACCTTCCTT 86169 Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593 || |||||||| ||| ||| || | |||||||| | ||| || ||||| || || Sbjct 86168 GTCTTGAATCTTAGACTTGACGTTGTCAATGGTGTCTGAAGATTCGACTTCCAAAGTAAT 86109 Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAAA 199621 |||||||| || | || ||||||||| Sbjct 86108 GGTCTTACCAGTCAAGGTCTTCACAAAA 86081 >seq8 Length=1564113 Score = 96.9 bits (106), Expect = 8e-15 Identities = 149/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473 ||||| || | ||| | || ||||||||||||| ||||||||||| |||||| || || Sbjct 561017 TCTCAAAACCAAGTGCAAGGTAGACTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTGCC 561076 Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533 |||||||| ||||| || || ||||| | | || ||||| || || || || Sbjct 561077 ATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCCTCCTT 561136 Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593 || || ||||| ||| || |||| ||||| | | || || || | || || Sbjct 561137 GTCTTGGATCTTGGACTTGACATTGTCGATAGTGTCAGAAGACTCGACTTCAAGGGTAAT 561196 Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 |||||||| || | || || ||||||||||| Sbjct 561197 TGTCTTACCGGTTAAGGTCTTAACAAAAATTTG 561229 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178921479160536