Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lachancea_20fermentati_20[genbank_20GCA_5F900074765.1_202016-10-26] 8 sequences; 10,264,457 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq1 149 6e-31 seq4 89.7 5e-13 >seq1 Length=762788 Score = 149 bits (164), Expect = 6e-31 Identities = 347/519 (67%), Gaps = 11/519 (2%) Strand=Plus/Plus Query 132916 CCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGGCATGAGGCCGCGTTTT 132975 |||||||| ||| |||| || || || ||| || | |||||||| | || || Sbjct 619237 CCCTCGTCTCTGCAAATTAGCTCATTAGAGAACGTTAGACCGGGCATCAAACCTTTCTTC 619296 Query 132976 TTGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGCCCTCGACGGCCGCGAAA 133035 || ||||| || || ||||| || || || ||||| || || || ||||| || || Sbjct 619297 TTTAGCCAGAAAATAGCGGCAAAGGATCCGGAGAAGAAAACACCTTCCACGGCAGCAAAG 619356 Query 133036 GCCACCAGGCGCTCGCCGAACGTGGCTTCTTTG--CTGGCGATCCAGCGCAGCGCCCATT 133093 || |||| | ||| | || ||| |||| | |||| ||||| | | ||||||| Sbjct 619357 GCGACCAATCTCTCTGCAAATAGGGCCTCTTCGTCCTGG--ATCCATCTGATGGCCCATT 619414 Query 133094 CGGCCTTTTCTTTGACGCACGGCATCGTTTCGATGGCGTTCAACAAACGGAGTTTCTCTT 133153 ||||||| || |||| || || |||| ||||| || || | | | | |||| Sbjct 619415 CGGCCTTCTCCTTGATCTGAGGAATATTTTCAATGGCATTGAATAG--GAAATCGCTCTC 619472 Query 133154 CCGAGGAACGC--ACGTAGGTGTCGATGAGGGTCGAATACATTTCCGAGTGTACGTTCTC 133211 | || | | ||||||||| || || || || | || ||||| | ||| || Sbjct 619473 CTTGGGGTCTTTGATGTAGGTGTCAATCAGCAGAGAGTAGGTCTCGGAGTGGATGTTTTC 619532 Query 133212 CATGGCGATTTGAAAGCCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGCGAA 133271 ||| ||| || || |||||||||||| || || | || ||||| | ||| Sbjct 619533 CATCATGATCTGGAACCCGTAAAAGCACTTGGCTTCTGGGATTTGAACTTCGGCTGAGAA 619592 Query 133272 ACGCTCGACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTG 133331 |||||||| || |||||||| || |||||| || || || || |||| ||| | Sbjct 619593 GTTCTCGACCAAGTTCTCGTTGACAATACCGTCGGACGCAGCAAAGAATGCCAACACACG 619652 Query 133332 CTTGATGAAATGGCGCTCGTTGTCGTTCAAGCGCTC---CCAGTCGCGCGTGTCCTTGGA 133388 | || ||| || |||| ||||||| ||| | ||||||| | | |||||||| Sbjct 619653 CGAGAGGAAGAAACGTTCGTGCTCGTTCATGCGGTTGTTCCAGTCGTGAATATCCTTGGA 619712 Query 133389 CAGGTCCACCTCCTCGACGGTCCAAAACGACGCCTCGGC 133427 || || | ||||||| ||||||| ||||||||||| || Sbjct 619713 CAAATCGATCTCCTCGGCGGTCCAGAACGACGCCTCAGC 619751 >seq4 Length=1192607 Score = 89.7 bits (98), Expect = 5e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || || || || || ||||||||| | || ||||| || | Sbjct 498847 ATGCAGATCTTCGTCAAGACTCTAACCGGTAAGACCATCACCTTGGAAGTCGAATCCTCT 498906 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 || | | | | |||| ||||| || |||| || || || || ||||| | ||||| Sbjct 498907 GATACCATCGACAACG-TTAAATCCAAGATCCAGGATAAGGAAGGTATTCCACCTGACCA 498965 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 || | || |||| ||| || || ||| |||| || | | || || |||||||| Sbjct 498966 GCAAAGACTGATTTTCGCTGGTAAGCAGTTGGAGGATGGCAGAACGCTTTCTGACTACAA 499025 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 |||||||||||| | || | |||||||| || | | ||||| || Sbjct 499026 CATCCAAAAGGAGTCTACTTTACATTTGGTTTTGAGACTAAGAGGTGG 499073 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500172749982720