Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lachancea_20fermentati_20[genbank_20GCA_5F900074765.1_202016-10-26]
8 sequences; 10,264,457 total letters
Query= NC_013953.1
Length=156344
Score E
Sequences producing significant alignments: (Bits) Value
seq1 149 6e-31
seq4 89.7 5e-13
>seq1
Length=762788
Score = 149 bits (164), Expect = 6e-31
Identities = 347/519 (67%), Gaps = 11/519 (2%)
Strand=Plus/Plus
Query 132916 CCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGGCATGAGGCCGCGTTTT 132975
|||||||| ||| |||| || || || ||| || | |||||||| | || ||
Sbjct 619237 CCCTCGTCTCTGCAAATTAGCTCATTAGAGAACGTTAGACCGGGCATCAAACCTTTCTTC 619296
Query 132976 TTGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGCCCTCGACGGCCGCGAAA 133035
|| ||||| || || ||||| || || || ||||| || || || ||||| || ||
Sbjct 619297 TTTAGCCAGAAAATAGCGGCAAAGGATCCGGAGAAGAAAACACCTTCCACGGCAGCAAAG 619356
Query 133036 GCCACCAGGCGCTCGCCGAACGTGGCTTCTTTG--CTGGCGATCCAGCGCAGCGCCCATT 133093
|| |||| | ||| | || ||| |||| | |||| ||||| | | |||||||
Sbjct 619357 GCGACCAATCTCTCTGCAAATAGGGCCTCTTCGTCCTGG--ATCCATCTGATGGCCCATT 619414
Query 133094 CGGCCTTTTCTTTGACGCACGGCATCGTTTCGATGGCGTTCAACAAACGGAGTTTCTCTT 133153
||||||| || |||| || || |||| ||||| || || | | | | ||||
Sbjct 619415 CGGCCTTCTCCTTGATCTGAGGAATATTTTCAATGGCATTGAATAG--GAAATCGCTCTC 619472
Query 133154 CCGAGGAACGC--ACGTAGGTGTCGATGAGGGTCGAATACATTTCCGAGTGTACGTTCTC 133211
| || | | ||||||||| || || || || | || ||||| | ||| ||
Sbjct 619473 CTTGGGGTCTTTGATGTAGGTGTCAATCAGCAGAGAGTAGGTCTCGGAGTGGATGTTTTC 619532
Query 133212 CATGGCGATTTGAAAGCCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGCGAA 133271
||| ||| || || |||||||||||| || || | || ||||| | |||
Sbjct 619533 CATCATGATCTGGAACCCGTAAAAGCACTTGGCTTCTGGGATTTGAACTTCGGCTGAGAA 619592
Query 133272 ACGCTCGACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTG 133331
|||||||| || |||||||| || |||||| || || || || |||| ||| |
Sbjct 619593 GTTCTCGACCAAGTTCTCGTTGACAATACCGTCGGACGCAGCAAAGAATGCCAACACACG 619652
Query 133332 CTTGATGAAATGGCGCTCGTTGTCGTTCAAGCGCTC---CCAGTCGCGCGTGTCCTTGGA 133388
| || ||| || |||| ||||||| ||| | ||||||| | | ||||||||
Sbjct 619653 CGAGAGGAAGAAACGTTCGTGCTCGTTCATGCGGTTGTTCCAGTCGTGAATATCCTTGGA 619712
Query 133389 CAGGTCCACCTCCTCGACGGTCCAAAACGACGCCTCGGC 133427
|| || | ||||||| ||||||| ||||||||||| ||
Sbjct 619713 CAAATCGATCTCCTCGGCGGTCCAGAACGACGCCTCAGC 619751
>seq4
Length=1192607
Score = 89.7 bits (98), Expect = 5e-13
Identities = 158/228 (69%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| || || || || || || ||||||||| | || ||||| || |
Sbjct 498847 ATGCAGATCTTCGTCAAGACTCTAACCGGTAAGACCATCACCTTGGAAGTCGAATCCTCT 498906
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|| | | | | |||| ||||| || |||| || || || || ||||| | |||||
Sbjct 498907 GATACCATCGACAACG-TTAAATCCAAGATCCAGGATAAGGAAGGTATTCCACCTGACCA 498965
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
|| | || |||| ||| || || ||| |||| || | | || || ||||||||
Sbjct 498966 GCAAAGACTGATTTTCGCTGGTAAGCAGTTGGAGGATGGCAGAACGCTTTCTGACTACAA 499025
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470
|||||||||||| | || | |||||||| || | | ||||| ||
Sbjct 499026 CATCCAAAAGGAGTCTACTTTACATTTGGTTTTGAGACTAAGAGGTGG 499073
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 500172749982720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |