Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lachancea_20fermentati_20[genbank_20GCA_5F900074765.1_202016-10-26]
8 sequences; 10,264,457 total letters
Query= NC_014637.1
Length=617453
Score E
Sequences producing significant alignments: (Bits) Value
seq4 127 8e-24
seq6 123 1e-22
seq1 123 1e-22
seq2 122 3e-22
seq3 95.1 5e-14
seq8 91.5 6e-13
>seq4
Length=1192607
Score = 127 bits (140), Expect = 8e-24
Identities = 163/225 (72%), Gaps = 0/225 (0%)
Strand=Plus/Plus
Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108
|||| | |||||||| || || | || || || || || ||||| || |||||||| ||
Sbjct 498618 AATGCAGATTTTCGTCAAGACTTTAACCGGCAAGACCATCACTCTGGAGGTTGAATCCTC 498677
Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168
||||| ||| || | ||| || || || ||||||||||| ||||| ||||||||
Sbjct 498678 TGATACCATCGACAACGTCAAATCCAAGATCCAGGATAAGGAAGGTATTCCACCTGATCA 498737
Query 391169 ACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAA 391228
|||| | || |||||| | || || || | || ||||| |||||| | | ||||| ||
Sbjct 498738 ACAAAGATTGATTTTCGCTGGTAAGCAGTTGGAGGATGGCAGAACTCTTTCTGATTACAA 498797
Query 391229 TATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGG 391273
|||| | ||||| | || | ||| | || || || || |||||
Sbjct 498798 TATTCAAAAGGAATCTACCTTACACCTGGTTTTGAGGCTAAGAGG 498842
Score = 93.3 bits (102), Expect = 2e-13
Identities = 155/224 (69%), Gaps = 0/224 (0%)
Strand=Plus/Plus
Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109
||| | || ||||| || || || || ||||| || || || | || || ||||| |||
Sbjct 498847 ATGCAGATCTTCGTCAAGACTCTAACCGGTAAGACCATCACCTTGGAAGTCGAATCCTCT 498906
Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169
|||| ||| || ||||| || || || ||||||||||| ||||| ||||| ||
Sbjct 498907 GATACCATCGACAACGTTAAATCCAAGATCCAGGATAAGGAAGGTATTCCACCTGACCAG 498966
Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229
||| | | |||||| | || || || | || ||||| ||||| | | || || ||
Sbjct 498967 CAAAGACTGATTTTCGCTGGTAAGCAGTTGGAGGATGGCAGAACGCTTTCTGACTACAAC 499026
Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGG 391273
|| | ||||| | || | || || || || ||||| |||||
Sbjct 499027 ATCCAAAAGGAGTCTACTTTACATTTGGTTTTGAGACTAAGAGG 499070
>seq6
Length=1504611
Score = 123 bits (136), Expect = 1e-22
Identities = 157/216 (73%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 391058 TTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCTGATAACAT 391117
||| || || || |||||||||| || |||||| | || || ||||| || || | |||
Sbjct 86081 TTTTGTGAAGACCTTGACTGGTAAGACCATTACTTTGGAAGTCGAATCTTCAGACACCAT 86140
Query 391118 TGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAACAACGTTT 391177
||| | || || |||||||| |||||||| ||||||||||| |||||| | ||
Sbjct 86141 TGACAACGTCAAGTCTAAGATTCAAGACAAGGAAGGTATTCCTCCTGACCAACAAAGATT 86200
Query 391178 AATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAATATTGATAA 391237
|| || | || || ||| | |||||||| ||||| ||| | || || || ||| | ||
Sbjct 86201 GATCTTTGCTGGTAAGCAATTGGAAGATGGCAGAACCTTGTCTGACTACAACATTCAAAA 86260
Query 391238 GGATGCAACACTTCACTTAGTATTAAGACTGAGAGG 391273
||| | || | ||||| || || ||| |||||||
Sbjct 86261 GGAATCTACCTTGCACTTGGTTTTGAGATTGAGAGG 86296
Score = 91.5 bits (100), Expect = 6e-13
Identities = 120/162 (74%), Gaps = 6/162 (4%)
Strand=Plus/Plus
Query 420808 GTAAATACAACAGTTTTTGTAGGCATATTTACACCAACAGAAAAAGTTTCAGTTGCTAAC 420867
|| || || || ||||||| ||||||||| | |||| ||| || ||||| ||||| ||
Sbjct 663402 GTGAAAACCACTGTTTTTGCAGGCATATTCAATCCAATAGAGAATGTTTCTGTTGCAAAA 663461
Query 420868 AAAACTTTAATTAAt--ttttttGAATAAAGAATTTCAACAATTTCTTTTAAAATAGGAA 420925
| ||||| | ||| || || ||||||| ||||| | | ||| || |||||||| |
Sbjct 663462 AGTACTTTCAAGAATCCTTCTTGGAATAAA--ATTTCTATGACTTCCTTCAAAATAGGTA 663519
Query 420926 TTATACCAGAATGATGATATGCC-ACACCTCTACATACTAAA 420966
|| |||||||||||| || || | |||||| | || ||||
Sbjct 663520 GTAGTCCAGAATGATGA-ATACCAATACCTCTTCTTAATAAA 663560
>seq1
Length=762788
Score = 123 bits (136), Expect = 1e-22
Identities = 257/383 (67%), Gaps = 6/383 (2%)
Strand=Plus/Minus
Query 451220 AAAGGTGAAACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATGGTTCTTACTAAAATG 451279
|| |||||| ||||| || ||||||||||| | || ||||| | | ||| |||
Sbjct 486999 AAGGGTGAAGAAAAAACCTTCACTCCTGAAGAAGTCTCTGCTATGATCTTGGGTAAGATG 486940
Query 451280 AAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAGTAATTACTGTTCCC 451339
|| ||| || || | || | ||| ||| ||| | || || | || |||||
Sbjct 486939 AAGCAAATTGCCGAGGATTACCTAGGTAAGAAAGTGACTCACGCTGTTGTAACCGTTCCA 486880
Query 451340 GCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATATTGCTGGTTTA 451399
|| |||||||||||||| ||| | || || || |||||||| || |||||| ||||||
Sbjct 486879 GCCTATTTCAATGATGCCCAAAGACAGGCTACAAAAGATGCTGGTACTATTGCAGGTTTA 486820
Query 451400 AATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATGGACTAGGAAAA 451459
||||| | |||| |||||||||| || || || || | || ||||| |||| ||
Sbjct 486819 AATGTCTTGAGAATCGTTAATGAACCAACTGCTGCCGCAATTGCTTATGGTCTAGACAAG 486760
Query 451460 TCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATTTTGGTGGAGGAACTCATGAT 451519
|| | || || | | || | || | ||| | ||||| || || |||
Sbjct 486759 TCTGA------CGACGAGCACCAGATCATTGTGTATGACCTGGGTGGTGGTACCTTTGAC 486706
Query 451520 ACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAAAGGCAACCAATGGTGATACT 451579
||| | || || ||||| |||| || |||||||| | || || |||||| |||
Sbjct 486705 GTGTCTTTGCTATCCATTGAGAATGGTGTTTTTGAAGTCCAAGCTACTGCTGGTGACACT 486646
Query 451580 CATCTAGGAGGTGAAGATATTGA 451602
|| | || ||||||||| ||||
Sbjct 486645 CACTTGGGTGGTGAAGATTTTGA 486623
>seq2
Length=1086951
Score = 122 bits (134), Expect = 3e-22
Identities = 227/333 (68%), Gaps = 9/333 (3%)
Strand=Plus/Minus
Query 451265 GTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCA 451324
||||| | || ||||||||||| || ||| || | || | || | ||||
Sbjct 900237 GTTCTAAACAAGATGAAAGAAACCGCTGAAGCTTACCTAGGAAAGACTGTGAAGAATGCC 900178
Query 451325 GTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGA 451384
|| |||| || || ||||| ||||| || | ||| | ||||| ||||| || || ||
Sbjct 900177 GTCGTTACCGTCCCTGCTTACTTCAACGACTCTCAAAGACAAGCCACTAAGGACGCTGGT 900118
Query 451385 CATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCA 451444
|| |||| |||||| ||||| ||||| || |||| |||||||| || || ||||||||
Sbjct 900117 CAAATTGTTGGTTTGAATGTCCTTCGTGTTGTTAACGAACCTACCGCCGCAGCTCTAGCC 900058
Query 451445 TATGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATTTTGGT 451504
|| || | ||||| || | || | |||| | || ||||| || || |||
Sbjct 900057 TACGG-GTTGGAAA--------AATCCGACGCAAAAGTTGTTGCTGTATTCGACTTGGGT 900007
Query 451505 GGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAAAGGCA 451564
|| || ||| |||| ||| | || ||||| | || || || ||||| || |
Sbjct 900006 GGTGGTACTTTCGATATTTCCATTCTAGATATTGACAACGGTGTTTTCGAAGTCAAATCC 899947
Query 451565 ACCAATGGTGATACTCATCTAGGAGGTGAAGAT 451597
||||| ||||| ||||| | || |||||||||
Sbjct 899946 ACCAACGGTGACACTCACTTGGGTGGTGAAGAT 899914
Score = 120 bits (132), Expect = 1e-21
Identities = 276/414 (67%), Gaps = 5/414 (1%)
Strand=Plus/Minus
Query 451193 GGAAAGCCCTATATTCAAGTAAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAA 451252
|| ||||| | ||||| || | ||||| || ||||| || ||| ||||||||||
Sbjct 124200 GGTAAGCCTTTCATTCAGGTTGAATATAAGGGCGAAACCAAGGTGTTTAGTCCTGAAGAA 124141
Query 451253 ATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCA 451312
||||| || |||||| | || ||||| ||||| || || ||| | ||| ||
Sbjct 124140 ATTTCGTCCATGGTTTTGGGCAAGATGAAGGAAACTGCTGAGGGATACTTGGGTACTAAT 124081
Query 451313 GTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACT 451372
|| || ||||| || | || |||||||| || ||||| || | ||| | || || ||
Sbjct 124080 GTGACCGATGCTGTGGTCACCGTTCCCGCATACTTCAACGACTCTCAAAGACAGGCTACC 124021
Query 451373 AAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCA 451432
|| ||||| || || |||||||| || || || || || || || || ||||| |||
Sbjct 124020 AAGGATGCCGGTACGATCGCTGGTTTGAACGTGCTGCGTATCATCAACGAGCCTACTGCA 123961
Query 451433 GCTGCTCTAGCATATGGACTAGGAAAATCAAAAGAAACAGA-AGaaaaaaaTATTTTAGT 451491
|| || | || || || |||| || | ||| || | ||| | || | || |
Sbjct 123960 GCAGCCATTGCTTACGGTCTAG----ATAAGAAGGGCCAAAGCGAACACAACGTCCTAAT 123905
Query 451492 ATTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATT 451551
|| || || ||||| || ||| ||| || | || || || || || || | ||
Sbjct 123904 CTTCGACTTGGGTGGTGGTACTTTCGATGTCTCCTTGCTATCCATCGACGACGGTATTTT 123845
Query 451552 TGAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGATATTGATAA 451605
||||| ||||| || ||| | ||||| | || ||||||||| | || ||
Sbjct 123844 CGAAGTCAAGGCCACTGCCGGTAACACTCACTTGGGTGGTGAAGATTTCGACAA 123791
>seq3
Length=1180369
Score = 95.1 bits (104), Expect = 5e-14
Identities = 142/202 (70%), Gaps = 0/202 (0%)
Strand=Plus/Plus
Query 306821 GATGAATATCCTACAAAATCGCCGCATGTAAAATTTATTAGTAAAATTTTCCATCCAAAT 306880
|| || ||||||| ||| | || || || || ||| | ||| |||| |||||||||||
Sbjct 626255 GAAGAGTATCCTAATAAACCACCACACGTGAAGTTTCTGAGTGAAATGTTCCATCCAAAC 626314
Query 306881 GTGTATCGTGATGGGCAAATTTGTCTAGATACTCTTCAAGGAAATTGGACACCAACATTG 306940
|| ||| | || |||| ||||| |||| | | ||| | ||||| || ||||
Sbjct 626315 GTATATGCAAACGGTGAAATCTGTCTGGATATTTTGCAAAACAGGTGGACTCCTACATAT 626374
Query 306941 AAAATTGTTTCTGTTCTTATTTCAGTTCAGTCATTATTGGATGATCCAAACCCAGACAGT 307000
| | | || || | | |||| ||||| ||||| ||||||||||||||| |
Sbjct 626375 GATGTGGCGTCGATTTTGACTTCAATTCAGAGTTTATTTAATGATCCAAACCCAGCATCT 626434
Query 307001 CCTGCAAATGTAGATGCTGCAA 307022
||||||||||| || |||||||
Sbjct 626435 CCTGCAAATGTTGAAGCTGCAA 626456
>seq8
Length=1564113
Score = 91.5 bits (100), Expect = 6e-13
Identities = 152/219 (69%), Gaps = 8/219 (4%)
Strand=Plus/Plus
Query 451223 GGTGAAACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATGGTTCTTACTAAAATGAAA 451282
|||||||| || || || | || ||||||| || |||||||| | || || |||||
Sbjct 274841 GGTGAAACCAAGACCTTCTCCCCACAAGAAATCTCTTCTATGGTCTTGACCAAGATGAAG 274900
Query 451283 GAAACAGCAGAACAATATATTGGTTCTCCA----GTTACTGATGCAGTAATTACTGTTCC 451338
|| | || ||| | || || ||| ||| | || || |||||||||||
Sbjct 274901 GAGATTGCTGAAGCTAAGATCGG----CCAAAAGGTTGAAAAGGCTGTCATTACTGTTCC 274956
Query 451339 CGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATATTGCTGGTTT 451398
||||| ||||| ||||| ||| | ||||| || || ||||| || |||||||||||
Sbjct 274957 AGCTTACTTCAACGATGCTCAAAGACAAGCCACCAAGGATGCTGGTGCCATTGCTGGTTT 275016
Query 451399 AAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGC 451437
|| ||| | || || || || || || || || |||||
Sbjct 275017 GAACGTTTTGCGTATCATCAACGAGCCAACTGCTGCTGC 275055
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1975718197488864
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |