Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lachancea_20fermentati_20[genbank_20GCA_5F900074765.1_202016-10-26] 8 sequences; 10,264,457 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq4 127 8e-24 seq6 123 1e-22 seq1 123 1e-22 seq2 122 3e-22 seq3 95.1 5e-14 seq8 91.5 6e-13 >seq4 Length=1192607 Score = 127 bits (140), Expect = 8e-24 Identities = 163/225 (72%), Gaps = 0/225 (0%) Strand=Plus/Plus Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108 |||| | |||||||| || || | || || || || || ||||| || |||||||| || Sbjct 498618 AATGCAGATTTTCGTCAAGACTTTAACCGGCAAGACCATCACTCTGGAGGTTGAATCCTC 498677 Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168 ||||| ||| || | ||| || || || ||||||||||| ||||| |||||||| Sbjct 498678 TGATACCATCGACAACGTCAAATCCAAGATCCAGGATAAGGAAGGTATTCCACCTGATCA 498737 Query 391169 ACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAA 391228 |||| | || |||||| | || || || | || ||||| |||||| | | ||||| || Sbjct 498738 ACAAAGATTGATTTTCGCTGGTAAGCAGTTGGAGGATGGCAGAACTCTTTCTGATTACAA 498797 Query 391229 TATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGG 391273 |||| | ||||| | || | ||| | || || || || ||||| Sbjct 498798 TATTCAAAAGGAATCTACCTTACACCTGGTTTTGAGGCTAAGAGG 498842 Score = 93.3 bits (102), Expect = 2e-13 Identities = 155/224 (69%), Gaps = 0/224 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || ||||| || || || || ||||| || || || | || || ||||| ||| Sbjct 498847 ATGCAGATCTTCGTCAAGACTCTAACCGGTAAGACCATCACCTTGGAAGTCGAATCCTCT 498906 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| ||| || ||||| || || || ||||||||||| ||||| ||||| || Sbjct 498907 GATACCATCGACAACGTTAAATCCAAGATCCAGGATAAGGAAGGTATTCCACCTGACCAG 498966 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 ||| | | |||||| | || || || | || ||||| ||||| | | || || || Sbjct 498967 CAAAGACTGATTTTCGCTGGTAAGCAGTTGGAGGATGGCAGAACGCTTTCTGACTACAAC 499026 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGG 391273 || | ||||| | || | || || || || ||||| ||||| Sbjct 499027 ATCCAAAAGGAGTCTACTTTACATTTGGTTTTGAGACTAAGAGG 499070 >seq6 Length=1504611 Score = 123 bits (136), Expect = 1e-22 Identities = 157/216 (73%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 391058 TTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCTGATAACAT 391117 ||| || || || |||||||||| || |||||| | || || ||||| || || | ||| Sbjct 86081 TTTTGTGAAGACCTTGACTGGTAAGACCATTACTTTGGAAGTCGAATCTTCAGACACCAT 86140 Query 391118 TGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAACAACGTTT 391177 ||| | || || |||||||| |||||||| ||||||||||| |||||| | || Sbjct 86141 TGACAACGTCAAGTCTAAGATTCAAGACAAGGAAGGTATTCCTCCTGACCAACAAAGATT 86200 Query 391178 AATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAATATTGATAA 391237 || || | || || ||| | |||||||| ||||| ||| | || || || ||| | || Sbjct 86201 GATCTTTGCTGGTAAGCAATTGGAAGATGGCAGAACCTTGTCTGACTACAACATTCAAAA 86260 Query 391238 GGATGCAACACTTCACTTAGTATTAAGACTGAGAGG 391273 ||| | || | ||||| || || ||| ||||||| Sbjct 86261 GGAATCTACCTTGCACTTGGTTTTGAGATTGAGAGG 86296 Score = 91.5 bits (100), Expect = 6e-13 Identities = 120/162 (74%), Gaps = 6/162 (4%) Strand=Plus/Plus Query 420808 GTAAATACAACAGTTTTTGTAGGCATATTTACACCAACAGAAAAAGTTTCAGTTGCTAAC 420867 || || || || ||||||| ||||||||| | |||| ||| || ||||| ||||| || Sbjct 663402 GTGAAAACCACTGTTTTTGCAGGCATATTCAATCCAATAGAGAATGTTTCTGTTGCAAAA 663461 Query 420868 AAAACTTTAATTAAt--ttttttGAATAAAGAATTTCAACAATTTCTTTTAAAATAGGAA 420925 | ||||| | ||| || || ||||||| ||||| | | ||| || |||||||| | Sbjct 663462 AGTACTTTCAAGAATCCTTCTTGGAATAAA--ATTTCTATGACTTCCTTCAAAATAGGTA 663519 Query 420926 TTATACCAGAATGATGATATGCC-ACACCTCTACATACTAAA 420966 || |||||||||||| || || | |||||| | || |||| Sbjct 663520 GTAGTCCAGAATGATGA-ATACCAATACCTCTTCTTAATAAA 663560 >seq1 Length=762788 Score = 123 bits (136), Expect = 1e-22 Identities = 257/383 (67%), Gaps = 6/383 (2%) Strand=Plus/Minus Query 451220 AAAGGTGAAACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATGGTTCTTACTAAAATG 451279 || |||||| ||||| || ||||||||||| | || ||||| | | ||| ||| Sbjct 486999 AAGGGTGAAGAAAAAACCTTCACTCCTGAAGAAGTCTCTGCTATGATCTTGGGTAAGATG 486940 Query 451280 AAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAGTAATTACTGTTCCC 451339 || ||| || || | || | ||| ||| ||| | || || | || ||||| Sbjct 486939 AAGCAAATTGCCGAGGATTACCTAGGTAAGAAAGTGACTCACGCTGTTGTAACCGTTCCA 486880 Query 451340 GCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATATTGCTGGTTTA 451399 || |||||||||||||| ||| | || || || |||||||| || |||||| |||||| Sbjct 486879 GCCTATTTCAATGATGCCCAAAGACAGGCTACAAAAGATGCTGGTACTATTGCAGGTTTA 486820 Query 451400 AATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATGGACTAGGAAAA 451459 ||||| | |||| |||||||||| || || || || | || ||||| |||| || Sbjct 486819 AATGTCTTGAGAATCGTTAATGAACCAACTGCTGCCGCAATTGCTTATGGTCTAGACAAG 486760 Query 451460 TCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATTTTGGTGGAGGAACTCATGAT 451519 || | || || | | || | || | ||| | ||||| || || ||| Sbjct 486759 TCTGA------CGACGAGCACCAGATCATTGTGTATGACCTGGGTGGTGGTACCTTTGAC 486706 Query 451520 ACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAAAGGCAACCAATGGTGATACT 451579 ||| | || || ||||| |||| || |||||||| | || || |||||| ||| Sbjct 486705 GTGTCTTTGCTATCCATTGAGAATGGTGTTTTTGAAGTCCAAGCTACTGCTGGTGACACT 486646 Query 451580 CATCTAGGAGGTGAAGATATTGA 451602 || | || ||||||||| |||| Sbjct 486645 CACTTGGGTGGTGAAGATTTTGA 486623 >seq2 Length=1086951 Score = 122 bits (134), Expect = 3e-22 Identities = 227/333 (68%), Gaps = 9/333 (3%) Strand=Plus/Minus Query 451265 GTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCA 451324 ||||| | || ||||||||||| || ||| || | || | || | |||| Sbjct 900237 GTTCTAAACAAGATGAAAGAAACCGCTGAAGCTTACCTAGGAAAGACTGTGAAGAATGCC 900178 Query 451325 GTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGA 451384 || |||| || || ||||| ||||| || | ||| | ||||| ||||| || || || Sbjct 900177 GTCGTTACCGTCCCTGCTTACTTCAACGACTCTCAAAGACAAGCCACTAAGGACGCTGGT 900118 Query 451385 CATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCA 451444 || |||| |||||| ||||| ||||| || |||| |||||||| || || |||||||| Sbjct 900117 CAAATTGTTGGTTTGAATGTCCTTCGTGTTGTTAACGAACCTACCGCCGCAGCTCTAGCC 900058 Query 451445 TATGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATTTTGGT 451504 || || | ||||| || | || | |||| | || ||||| || || ||| Sbjct 900057 TACGG-GTTGGAAA--------AATCCGACGCAAAAGTTGTTGCTGTATTCGACTTGGGT 900007 Query 451505 GGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAAAGGCA 451564 || || ||| |||| ||| | || ||||| | || || || ||||| || | Sbjct 900006 GGTGGTACTTTCGATATTTCCATTCTAGATATTGACAACGGTGTTTTCGAAGTCAAATCC 899947 Query 451565 ACCAATGGTGATACTCATCTAGGAGGTGAAGAT 451597 ||||| ||||| ||||| | || ||||||||| Sbjct 899946 ACCAACGGTGACACTCACTTGGGTGGTGAAGAT 899914 Score = 120 bits (132), Expect = 1e-21 Identities = 276/414 (67%), Gaps = 5/414 (1%) Strand=Plus/Minus Query 451193 GGAAAGCCCTATATTCAAGTAAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAA 451252 || ||||| | ||||| || | ||||| || ||||| || ||| |||||||||| Sbjct 124200 GGTAAGCCTTTCATTCAGGTTGAATATAAGGGCGAAACCAAGGTGTTTAGTCCTGAAGAA 124141 Query 451253 ATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCA 451312 ||||| || |||||| | || ||||| ||||| || || ||| | ||| || Sbjct 124140 ATTTCGTCCATGGTTTTGGGCAAGATGAAGGAAACTGCTGAGGGATACTTGGGTACTAAT 124081 Query 451313 GTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACT 451372 || || ||||| || | || |||||||| || ||||| || | ||| | || || || Sbjct 124080 GTGACCGATGCTGTGGTCACCGTTCCCGCATACTTCAACGACTCTCAAAGACAGGCTACC 124021 Query 451373 AAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCA 451432 || ||||| || || |||||||| || || || || || || || || ||||| ||| Sbjct 124020 AAGGATGCCGGTACGATCGCTGGTTTGAACGTGCTGCGTATCATCAACGAGCCTACTGCA 123961 Query 451433 GCTGCTCTAGCATATGGACTAGGAAAATCAAAAGAAACAGA-AGaaaaaaaTATTTTAGT 451491 || || | || || || |||| || | ||| || | ||| | || | || | Sbjct 123960 GCAGCCATTGCTTACGGTCTAG----ATAAGAAGGGCCAAAGCGAACACAACGTCCTAAT 123905 Query 451492 ATTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATT 451551 || || || ||||| || ||| ||| || | || || || || || || | || Sbjct 123904 CTTCGACTTGGGTGGTGGTACTTTCGATGTCTCCTTGCTATCCATCGACGACGGTATTTT 123845 Query 451552 TGAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGATATTGATAA 451605 ||||| ||||| || ||| | ||||| | || ||||||||| | || || Sbjct 123844 CGAAGTCAAGGCCACTGCCGGTAACACTCACTTGGGTGGTGAAGATTTCGACAA 123791 >seq3 Length=1180369 Score = 95.1 bits (104), Expect = 5e-14 Identities = 142/202 (70%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 306821 GATGAATATCCTACAAAATCGCCGCATGTAAAATTTATTAGTAAAATTTTCCATCCAAAT 306880 || || ||||||| ||| | || || || || ||| | ||| |||| ||||||||||| Sbjct 626255 GAAGAGTATCCTAATAAACCACCACACGTGAAGTTTCTGAGTGAAATGTTCCATCCAAAC 626314 Query 306881 GTGTATCGTGATGGGCAAATTTGTCTAGATACTCTTCAAGGAAATTGGACACCAACATTG 306940 || ||| | || |||| ||||| |||| | | ||| | ||||| || |||| Sbjct 626315 GTATATGCAAACGGTGAAATCTGTCTGGATATTTTGCAAAACAGGTGGACTCCTACATAT 626374 Query 306941 AAAATTGTTTCTGTTCTTATTTCAGTTCAGTCATTATTGGATGATCCAAACCCAGACAGT 307000 | | | || || | | |||| ||||| ||||| ||||||||||||||| | Sbjct 626375 GATGTGGCGTCGATTTTGACTTCAATTCAGAGTTTATTTAATGATCCAAACCCAGCATCT 626434 Query 307001 CCTGCAAATGTAGATGCTGCAA 307022 ||||||||||| || ||||||| Sbjct 626435 CCTGCAAATGTTGAAGCTGCAA 626456 >seq8 Length=1564113 Score = 91.5 bits (100), Expect = 6e-13 Identities = 152/219 (69%), Gaps = 8/219 (4%) Strand=Plus/Plus Query 451223 GGTGAAACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATGGTTCTTACTAAAATGAAA 451282 |||||||| || || || | || ||||||| || |||||||| | || || ||||| Sbjct 274841 GGTGAAACCAAGACCTTCTCCCCACAAGAAATCTCTTCTATGGTCTTGACCAAGATGAAG 274900 Query 451283 GAAACAGCAGAACAATATATTGGTTCTCCA----GTTACTGATGCAGTAATTACTGTTCC 451338 || | || ||| | || || ||| ||| | || || ||||||||||| Sbjct 274901 GAGATTGCTGAAGCTAAGATCGG----CCAAAAGGTTGAAAAGGCTGTCATTACTGTTCC 274956 Query 451339 CGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATATTGCTGGTTT 451398 ||||| ||||| ||||| ||| | ||||| || || ||||| || ||||||||||| Sbjct 274957 AGCTTACTTCAACGATGCTCAAAGACAAGCCACCAAGGATGCTGGTGCCATTGCTGGTTT 275016 Query 451399 AAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGC 451437 || ||| | || || || || || || || || ||||| Sbjct 275017 GAACGTTTTGCGTATCATCAACGAGCCAACTGCTGCTGC 275055 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975718197488864