Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lachancea_20fermentati_20[genbank_20GCA_5F900074765.1_202016-10-26] 8 sequences; 10,264,457 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq2 300 2e-76 seq5 100 3e-16 >seq2 Length=1086951 Score = 300 bits (332), Expect = 2e-76 Identities = 1173/1820 (64%), Gaps = 57/1820 (3%) Strand=Plus/Plus Query 109414 TAATACATACCCGTTTTGAGACCAGCCTTCCATGCGTACATATGCATTGAAGAGAGTTTG 109473 || |||||||| || || | ||| ||||||| |||| | ||||| | | ||| Sbjct 389318 TAGTACATACCGGTCTTCAAACCCTTCTTCCATCCGTAAAAGTGCATACTGGTCAATTTA 389377 Query 109474 GAAAGTGTCGGACTCTCCATAAACAAGTTCATCGACTGAGACTGATCGATGAATCGACCA 109533 | ||| ||| ||| || ||||| || || || ||||| ||| | | | | Sbjct 389378 CCCATTGTTGGAGCACGAATATGCACGTTCAAAGATTGTGATTGATCAATGTAGCAAGAA 389437 Query 109534 CGATCAGCCGCCATGTCGATGATACACTTTTGGCTAATTTCCCAGACAGTCTTGTACAAA 109593 |||||||| |||||||| || || |||||| | ||||||||| |||||||| | Sbjct 389438 CGATCAGCAGCCATGTCAATAATTGTCTTTTGAGACAATTCCCAGACTGTCTTGTAAAGG 389497 Query 109594 TTCTTGATATCATCGGGAATGTCCACGATGTTTTGAATAGAGCCACCAGCCTTCACCATG 109653 | ||| | || | ||||||| | ||||||||| || || | | ||| Sbjct 389498 TCCTTCAATTCTTGAGGAATGTTGGGTAGGTTTTGAATGGAACCGTTGTCAGAAATAATG 389557 Query 109654 AGATCCTTCATCTCTTTCGACCAGAGACCGACCTTTTTGAGATCGT-CAACAAGATGCTT 109712 || |||||| ||| ||| ||||| | | | ||| ||||||| | | Sbjct 389558 TGAGACTTCATAGCTTCATCCCATAGACCCAAATCCACCAAATCACGCAACAAG-TACGG 389616 Query 109713 GTTGACCACGACAAATTCACCAGCAAGTGTGCGTCGGAGGTAGATGTTAGTCGTGTAGGG 109772 ||||| | |||||||| | || || || ||| ||||| | || || || Sbjct 389617 ATTGACAATTTGGAATTCACCTGATAGAACACGACGTGAGTACATGTTTGAGGTATATGG 389676 Query 109773 TTCGAAACACTCATTGTTGCCTAGGATTTGTGCAGTGGAAGCTGTGGGCATGGGAGCCAT 109832 ||||||||| || |||| || | ||| || | ||| || || || ||||| || || | Sbjct 389677 TTCGAAACATTCGTTGTAACCCAAGATCTGGGAAGTAGAGGCAGTTGGCATTGGGGCTAG 389736 Query 109833 GAGAAGACTGTTTCGGAGACC--CTTCGTCTTTACCCGCTCACGCATTGCGTCCCAATCA 109890 | ||| ||||| | ||| ||| | | | |||| | | | |||||||| Sbjct 389737 CAACAGAGAGTTTCTAATACCGTCTTTGATAATGTCTGCTCTCAAAGTT--TCCCAATCC 389794 Query 109891 TAACGACCACTAAATTTAGTCTCACCATCCCACATATCTGGTTGAAGTACACCCTCAGCA 109950 | || || || | ||| || |||||| || |||||| | |||||| ||| Sbjct 389795 CATAGATCAGTAGGT---GTCCTGCC---CCACATGTCAAATTGAAGAATACCCTCGGCA 389848 Query 109951 GCAGGAGAACCCTTGAAACTCTCGTACGACCCCTCAACCTCGGCCAACTCGGATGAAGCC 110010 ||||| || |||||||| ||||||| | ||||| || |||||||||| ||| ||| Sbjct 389849 GCAGGGGATCCCTTGAATGTCTCGTATGGGCCCTCTTCCAGGGCCAACTCGTGTGATGCC 389908 Query 110011 TCTAGTGCCGCATGATACATAGTCTCAAAAATATGAGCATTCA----TGAGGCGAGACTC 110066 ||||| || || ||||||||||||||||| | ||| ||||| | ||| ||| Sbjct 389909 TCTAGGGCAGCGTGATACATAGTCTCAAAGACGTGAATATTCAATTCTTTGGC----CTC 389964 Query 110067 TTCACAGTCGAAGGGAAGACCACAAAGAATAAACACATCCGCTAGACCCTGAACACCGAG 110126 | | ||||||| |||| || | | || || ||| || | || |||||||| | Sbjct 389965 CTGAGAGTCGAAAGGAATACGCAACATCATGAAAGTATCGGCCAACCCTTGAACACCCAA 390024 Query 110127 ACCAATGGGGCGATGCTTCATGTTAGAGCGTCGAGCAGTTTCTACGGGGTAAAAGTTGCG 110186 | |||| || | || ||||||| || | || |||||||| ||||| ||| |||| || Sbjct 390025 AGCAATAGGTCTGTGTCTCATGTTGGATCTTCTGGCAGTTTCAACGGGATAATAGTTACG 390084 Query 110187 GTCGATGACCCGATTGAGATTCTTCGTCACAGTCTTCGTGATTTCATGGAGTTT------ 110240 ||||||||| | || | ||| || ||| ||| | |||||||| || || Sbjct 390085 GTCGATGACTCTGTTCAAATTACGGGTGACAACCTTGGAAATTTCATGTAGCTTCTCAAA 390144 Query 110241 GTCGTA--ATCGAACGTTTTCGTCTCCTTA--TTGACAT--ATTTGGGGAGAGCAATAGA 110294 || ||| || || ||| ||||| | | || || || || | |||| ||| Sbjct 390145 GTTGTACCATTGAGTCTTTCCGTCTTCAGAAGTTTCAATGAATGCTGGCAATGCAACAGA 390204 Query 110295 CGCAAGATTGCACACAGAAGTCTCGTCTTTGTCGGTGTATTCCAAAATTTCCGTACACAA 110354 || | || ||||| | ||| || ||| | | ||| || | ||||| |||||| Sbjct 390205 AGCCAAGTTACACACGGCAGTTTCCTCTGGGGAAGAGTACTCGACGATTTCACAACACAA 390264 Query 110355 GTTGGAACTCTTAATGACACCCAAGTTCTTCTGATTCGATTTGGAGTTGCATGCATCCTT 110414 ||| ||| ||| ||| ||| | |||||| || || || || ||| || | ||| || Sbjct 390265 GTTAGAAGACTTGATGGTACCAAGGTTCTTTTGGTTAGACTTTCTGTTACAAGAATCTTT 390324 Query 110415 ATAGAGCATGTATGGGGTACCAGTTTCCGTCTGTGACTTGAGAATGGCCTTCCATA-CAT 110473 || | |||| |||| ||||| ||||||||||| | | |||||||| | ||||| | | Sbjct 390325 GTAAATCATGAATGGAGTACCGGTTTCCGTCTGAGCTTCTAGAATGGCATACCATAGCTT 390384 Query 110474 CGGCGGCGGGGACAGTTGCGTTAGCGAGACCTTCCTCCTCGTA--CTTGGTGTACAAGTC 110531 | | || || ||| || | | || || | | |||| || | || ||| | Sbjct 390385 CTG-AGCTTTGATAGTCTTTCTACCACGGCCCTCTTGCACGTAACGTTCATATA-AAG-C 390441 Query 110532 CTCAAATTCCTGTCCGTACACATCAGAAAGACCCTTCGCCTTGTCGGGACAGAAGAGGGA 110591 || ||||| | || || ||||| | |||||| || | || | || | || Sbjct 390442 TTCGAATTCATCACCATAGACATCGGCAAGACCGGGAGCTTCACTAGGGGAAAACAAGGT 390501 Query 110592 CCAATTTCCACCCTCCTCAACCCTCTTCATGAACAGGTCAGGAATCCACATCGCCGAGAA 110651 ||| | || ||| | ||| ||||||||||||| || |||| ||| | || | ||| Sbjct 390502 CCATTCACCGTTCTCTTGAACTCTCTTCATGAACAAATCTGGAACCCATAGAGCAGGGAA 390561 Query 110652 AAGGTCACGGCAACGAGCCTCTTCATCACCTTGGTTGAGGCGTAGCTCCAAAAAGTCCAT 110711 | || | | ||| ||||| | ||| ||||| || | || | |||||| | Sbjct 390562 CAAATCTCTGGCACGGATTTCTTCCTTACCGTGGTTTTTCCGGATGTCGACAAAGTCGAA 390621 Query 110712 GATATCCGAGTGCCATGGTTCGAGATAGACAGCGA-------TGGATCCCTTACGACGAC 110764 |||||| |||||||||||||| | || | || | ||| || ||| | | | Sbjct 390622 GATATCAGAGTGCCATGGTTCTAAGTAAATTGCAAAAGCACCTGG-TCTCTT--GTTG-C 390677 Query 110765 CCGCCTGGTTAACATAGCGTGCTGTGGCATTGAAGACCCTGAGCATAGGAATAATTCCAT 110824 | | || | ||| || || || ||| ||| | || | | ||| || ||||| |||| Sbjct 390678 CACCTTGATCAACGTAACGAGCAGTGTTGTTGTATACACGAACCATGGGGATAATACCAT 390737 Query 110825 CGGATTGACCATTTGTACCCCTAATTCTGGACTTATTGGCACGAATGTCGTGGATATGCA 110884 || ||| || ||||| ||| ||| | | |||||||| |||||| |||| Sbjct 390738 TCGAAGTACCGTTGGTACCTGCAATGTAGGAGCCTGTAGAACGAATGTTGTGGATGTGCA 390797 Query 110885 TACCAATACCACCCGCCCACTTACTAATTTGTGCACACTCTGTGAGTGTACCATAAATAC 110944 || ||||| ||||| ||| || ||||| ||| | | ||| | || |||| Sbjct 390798 ATCCGATACCGCCCGCAGTCTTGGAGATCATGGCACATTCTTTCAAAGTATCGTAGATAC 390857 Query 110945 CATCAATCGAATCTGCCTTGTTGGCAATTAGAAAGCAAGAAGACATCTGAGGACGAGGCG 111004 | || || || || | || |||| | || || || ||||||||||||||| |||| | Sbjct 390858 CTTCGATGGAGTCCTCTTTCATGGCTACCAGGAAACAGGAAGACATCTGAGGATGAGGAG 390917 Query 111005 TTCCCGCATTGAAGAGTGTAGGTGTCGCATGAATGAACAGACCTT-GGGACATCTTGTTG 111063 | || || ||||| | || || | || ||| |||| | | ||| | ||||| ||| Sbjct 390918 TACCGGCGTTGAATAACGTGGGCGATGCGTGAGTGAA-ATATCTTAGAGACATGAGATTG 390976 Query 111064 TATGTGTCGAGTGCGGAGGGTACATCTTTACCGTGAATACCAATGGCAACTCGCATGAAC 111123 || || ||||| | | || ||||| ||||| | |||||| ||||||| | Sbjct 390977 TAGGTTTCGAGCACTCTTTCGATGTCGCGGCCGTGGATACCGACGGCAACACGCATGATC 391036 Query 111124 ATATATTGAGG-CGT--TTCGATTAGCTTTCCATCAACACGCTGAAGGTAACTCTTCTCT 111180 | || ||||| ||| | ||| | || ||||| | ||| | | ||| ||| Sbjct 391037 AAATGCTGAGGACGTTCTGCGACT---TTACCATCGATACGGAGTAAGTACGAACGTTCT 391093 Query 111181 AGGGTCTTGAGACCAAAGTA 111200 |||||||||| |||||| || Sbjct 391094 AGGGTCTTGAAACCAAAATA 391113 >seq5 Length=1346284 Score = 100 bits (110), Expect = 3e-16 Identities = 279/426 (65%), Gaps = 8/426 (2%) Strand=Plus/Plus Query 167357 AACCCGTACCAATACCTTCAGTACCGTTTACCAAAACCATCGGTAGAGTTGGCATGTAAA 167416 |||| || || || ||||||| || || ||||||||||| |||| ||| | || Sbjct 1115693 AACCAGTTCCTATGCCTTCAGCTCCATTGACCAAAACCATAGGTATGACTGGTAGATACC 1115752 Query 167417 AGTCGGGTTCAATGGAACGACCATCATCATCCAAGTAGTTGAGAATGGCATCATCTTTGG 167476 | |||||||| || | || ||||||| | || || || || | | || ||| | Sbjct 1115753 ATTCGGGTTCTATTGTTTGATCATCATCCTGTAAATAATTTAGCAAAGGATTATCAAGAG 1115812 Query 167477 GATCGAAGAGCTTTCGAGCCTCCTTGGTAAGCTTCGTAAAGATGTACCTCGTCTGAGACG 167536 | | ||| | |||| ||| | || | ||| ||||||||| || || || Sbjct 1115813 GGTTGAATATGAAACGAGTTATCTTATTGAGTTCAGTATTGATGTACCTTGTAGCAGCCG 1115872 Query 167537 CATCCTTGCCACCCATGAGGCGTGTACCAAATTGACCACATGGCTCGAGAAGATTGATGT 167596 ||| || || |||| || |||||||| |||| ||||| | ||| || |||| Sbjct 1115873 AATCTTTACCGCCCACAGCTCGAGTACCAAAAGCACCATTTGGCTTTAAAAGGTTAATGT 1115932 Query 167597 TATTCGACCCCGTATAATCGTTGGCCAACTTGACGATCGTTTCAGCGAGGGAAACTTCGC 167656 | || || || || | || | |||| || || |||| |||||| || |||| | Sbjct 1115933 TGTTGGATCCTATAAAGTCTTGCGCCATTCCAACAATAGTTTGAGCGAGAGACTCTTCAC 1115992 Query 167657 CGTGGTGGTAAGCACTCTTTTCAGCCACATATGCTGCCAA----CTGTGCAACCTTCATC 167712 | || || ||| | | | || | | |||| | |||| ||| ||||| || ||| Sbjct 1115993 CATGATGATAACCGGTGTGCTC--CGAGATATAC--CCAATTAGCTGCGCAACTTTAATC 1116048 Query 167713 TCATCTTTGAGATTCTTTTGGAAACATGAATACATAACCTTGCGTTGAGAAGGTTTGAGA 167772 ||| |||| | |||| ||| |||||| ||| | ||| || |||||| ||||| | | Sbjct 1116049 TCACCTTTCAAATTCCTTTTGAAACAACCATATAAAACTTTCCGTTGACCTGGTTTAAAA 1116108 Query 167773 CCATCT 167778 |||||| Sbjct 1116109 CCATCT 1116114 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588975941102400