Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lachancea_20fermentati_20[genbank_20GCA_5F900074765.1_202016-10-26] 8 sequences; 10,264,457 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq3 87.8 2e-12 >seq3 Length=1180369 Score = 87.8 bits (96), Expect = 2e-12 Identities = 123/173 (71%), Gaps = 0/173 (0%) Strand=Plus/Minus Query 154932 AAGATCGTTCATGACAATGGTGGTCAGGTATATCTTGATGGAGCAAATCTAAATGCACAG 154991 || || || ||||| || || || || || || | ||||| || ||| | ||||| || Sbjct 274445 AACATAGTCCATGAGAACGGGGGACAAGTTTACTTGGATGGTGCCAATATGAATGCGCAA 274386 Query 154992 GTAGGACTAGCAAAACCATGTGAGTATGGTGCAGATGTATGTCATCTAAACTTACATAAA 155051 || || ||| || || | || ||||||||||| ||||| || ||| ||||||| Sbjct 274385 GTGGGTCTAACATCTCCTGGAGACCTAGGTGCAGATGTCTGTCACCTGAACCTACATAAG 274326 Query 155052 ACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATAGGTGT 155104 || |||| |||||||| || ||||| || || || || || || || |||| Sbjct 274325 ACTTTCTCCATTCCACACGGTGGTGGTGGACCCGGTGTTGGCCCAATTTGTGT 274273 Score = 86.0 bits (94), Expect = 7e-12 Identities = 158/230 (69%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 153768 CAAAGGTTTGGTATTCCTATGGGATATGGAGGTCCTCATGCTGCATTCTTTGCAACAACA 153827 ||||| |||||| | || | || || || || || || ||||||||||| || Sbjct 275624 CAAAGATTTGGTGTCCCATTTGGTTACGGTGGACCACACGCTGCATTCTTCGCGGTTGTC 275565 Query 153828 GACAAGTATAAGAGAAAGATACCTGGCAGAATTGTAGGTCAGTCAGTA--GATAGTGAAG 153885 || || | || ||||||||||||||||||||||| || |||| | ||||| | Sbjct 275564 GAAAAATTGAACAGAAAGATACCTGGCAGAATTGTTGG--AGTCTCGAAGGATAGATTGG 275507 Query 153886 GTAATAAAGCATACAGATTAGCACTACAGACTAGAGAGCAGCATATCAGGAGAGACAAAG 153945 | || ||| | | | || |||||||| |||||||| ||||| | | ||||| | Sbjct 275506 GGAAACCAGCTTTACGTCTCGCTCTACAGACCAGAGAGCAACATATTAAACGTGACAAGG 275447 Query 153946 CAACCAGTAACATCTGCACAGCTCAGGCACTGCTGGCTAATATGTCTGGA 153995 |||| ||||| || || || || || || |||| ||||| ||||| Sbjct 275446 CAACTTCCAACATTTGTACTGCCCAAGCTTTGTTGGCCAATATTGCTGGA 275397 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 579212742078720