Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lachancea_20fermentati_20[genbank_20GCA_5F900074765.1_202016-10-26] 8 sequences; 10,264,457 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq3 114 2e-20 >seq3 Length=1180369 Score = 114 bits (126), Expect = 2e-20 Identities = 129/173 (75%), Gaps = 0/173 (0%) Strand=Plus/Minus Query 159607 AAGATTGTTCATGAGAATGGTGGTCAGGTATATCTTGATGGTGCAAATCTAAATGCACAG 159666 || || || |||||||| || || || || || | |||||||| ||| | ||||| || Sbjct 274445 AACATAGTCCATGAGAACGGGGGACAAGTTTACTTGGATGGTGCCAATATGAATGCGCAA 274386 Query 159667 GTAGGTCTAGCAAAACCATGTGACTATGGTGCAGATGTATGTCATCTAAACTTACATAAG 159726 || |||||| || || | ||| ||||||||||| ||||| || ||| |||||||| Sbjct 274385 GTGGGTCTAACATCTCCTGGAGACCTAGGTGCAGATGTCTGTCACCTGAACCTACATAAG 274326 Query 159727 ACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATTGGTGT 159779 || |||| |||||||| || ||||| || || || || || || ||| |||| Sbjct 274325 ACTTTCTCCATTCCACACGGTGGTGGTGGACCCGGTGTTGGCCCAATTTGTGT 274273 Score = 96.9 bits (106), Expect = 4e-15 Identities = 160/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 158443 CAAAGGTTTGGTATTCCTATGGGATACGGAGGTCCTCATGCTGCATTCTTTGCAACAACA 158502 ||||| |||||| | || | || ||||| || || || ||||||||||| || Sbjct 275624 CAAAGATTTGGTGTCCCATTTGGTTACGGTGGACCACACGCTGCATTCTTCGCGGTTGTC 275565 Query 158503 GACAAGTATAAGAGAAAGATACCTGGCAGAATTGTAGGTCAGTCAGTA--GATAGCGAAG 158560 || || | || ||||||||||||||||||||||| || |||| | ||||| | Sbjct 275564 GAAAAATTGAACAGAAAGATACCTGGCAGAATTGTTGG--AGTCTCGAAGGATAGATTGG 275507 Query 158561 GTAATAAAGCATACAGATTAGCACTACAGACTAGAGAGCAGCATATCAGAAGAGACAAAG 158620 | || ||| | | | || |||||||| |||||||| ||||| | | | ||||| | Sbjct 275506 GGAAACCAGCTTTACGTCTCGCTCTACAGACCAGAGAGCAACATATTAAACGTGACAAGG 275447 Query 158621 CAACCAGTAACATCTGCACAGCACAAGCACTGCTGGCTAATATGTCTGG 158669 |||| ||||| || || || ||||| || |||| ||||| |||| Sbjct 275446 CAACTTCCAACATTTGTACTGCCCAAGCTTTGTTGGCCAATATTGCTGG 275398 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588051141194880