Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lachancea_20fermentati_20[genbank_20GCA_5F900074765.1_202016-10-26] 8 sequences; 10,264,457 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq4 170 4e-37 seq6 167 5e-36 seq8 149 1e-30 seq2 87.8 4e-12 >seq4 Length=1192607 Score = 170 bits (188), Expect = 4e-37 Identities = 171/222 (77%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| || |||||||| | ||| | || || || ||||||||||||||||| | |||||| Sbjct 499296 TCTTAGCCTCAAAACCAAGTGTAAGGTAGATTCCTTTTGAATATTGTAATCAGAAAGAGT 499237 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 ||| ||||| || | |||||||| ||||| || | || ||| ||||| || ||||| || Sbjct 499236 TCTGCCATCCTCCAATTGCTTACCGGCGAAAATCAATCTTTGCTGGTCAGGTGGAATACC 499177 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 ||| ||||||||||| || ||||| || || ||||| || || ||| ||||| | Sbjct 499176 TTCCTTGTCTTGAATCTTGGATTTGACATTGTCGATGGTATCAGAGGATTCGACTTCCAA 499117 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 ||||| ||||| ||||||||||| || ||||| | ||||| Sbjct 499116 GGTAATAGTCTTACCTGTCAAAGTCTTGACGAAAATCTGCAT 499075 Score = 158 bits (174), Expect = 3e-33 Identities = 168/222 (76%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| ||||||||||| | || | ||| ||||| |||||||| ||||| || | ||| || Sbjct 499524 TCTTAGTCTCAAAACCAAATGTAAAGTAGACTCCTTTTGAATGTTGTAGTCAGAAAGCGT 499465 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 ||| ||||| || | |||||||| ||||| || | || |||||||||||| ||||| || Sbjct 499464 TCTGCCATCCTCCAATTGCTTACCGGCGAAAATCAATCTTTGTTGGTCTGGTGGAATACC 499405 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 ||| ||||||||||| || |||||||| || || ||||| ||| || || || | Sbjct 499404 TTCCTTGTCTTGAATCTTGGATTTGACGTTGTCTATCGTGTCAGAAGACTCAACCTCCAA 499345 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 |||| ||||| || || | ||| || ||||| | ||||| Sbjct 499344 AGTAATAGTCTTACCGGTTAGAGTCTTGACGAAGATCTGCAT 499303 Score = 158 bits (174), Expect = 3e-33 Identities = 168/222 (76%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| | ||||||||| | ||| | || || || ||||||||||||||||| | |||||| Sbjct 499980 TCTTAATCTCAAAACCAAGTGTAAGGTAGATTCCTTTTGAATATTGTAATCAGAAAGAGT 499921 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 ||| ||||| || | |||||||| ||||| || | || ||| ||||| || ||||| || Sbjct 499920 TCTGCCATCCTCCAATTGCTTACCGGCGAAAATCAATCTTTGCTGGTCAGGTGGAATACC 499861 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 ||| ||||||||||| || ||| ||||| || ||||| || || ||| ||||| | Sbjct 499860 TTCCTTGTCTTGAATCTTGGACTTAACGTTGTCGATGGTATCAGAGGATTCGACTTCCAA 499801 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 ||| | ||||| || || | ||| || ||||| | ||||| Sbjct 499800 GGTGATGGTCTTACCGGTTAGAGTCTTGACGAAGATCTGCAT 499759 Score = 156 bits (172), Expect = 9e-33 Identities = 169/224 (75%), Gaps = 0/224 (0%) Strand=Plus/Minus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| || |||||||| ||||| | || || || ||||||||||||||||| | |||||| Sbjct 498840 TCTTAGCCTCAAAACCAGGTGTAAGGTAGATTCCTTTTGAATATTGTAATCAGAAAGAGT 498781 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 ||| ||||| || | ||||||||| ||||| || | || |||||| || || ||||| || Sbjct 498780 TCTGCCATCCTCCAACTGCTTACCAGCGAAAATCAATCTTTGTTGATCAGGTGGAATACC 498721 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 ||| || || || || || |||||||| || ||||| || || ||| || || || Sbjct 498720 TTCCTTATCCTGGATCTTGGATTTGACGTTGTCGATGGTATCAGAGGATTCAACCTCCAG 498661 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCATTT 195142 || | ||||| || || ||||| || ||||| | ||||||| Sbjct 498660 AGTGATGGTCTTGCCGGTTAAAGTCTTGACGAAAATCTGCATTT 498617 Score = 152 bits (168), Expect = 1e-31 Identities = 167/222 (75%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| ||||||||||| | ||| || |||||||| ||||| || ||||| || | ||| || Sbjct 499752 TCTTAGTCTCAAAACCAAGTGGAGCGTGGACTCCTTTTGGATGTTGTAGTCAGAAAGCGT 499693 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 ||| ||||| || | ||||||||| ||||| || |||| ||| ||||| || || || || Sbjct 499692 TCTGCCATCCTCCAACTGCTTACCGGCGAAAATCAGTCTTTGCTGGTCAGGTGGGATACC 499633 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 ||| ||||||||||| || || ||||| || || ||||| ||| || || || | Sbjct 499632 TTCCTTGTCTTGAATCTTGGATTTAACGTTGTCTATCGTGTCAGAAGACTCAACCTCCAA 499573 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || | ||||| || || ||||| || ||||| | ||||| Sbjct 499572 AGTGATGGTCTTACCGGTTAAAGTCTTGACGAAAATCTGCAT 499531 Score = 140 bits (154), Expect = 7e-28 Identities = 164/222 (74%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| ||||||||||| | || | ||| ||||| ||||| || ||||| || | ||| || Sbjct 499068 TCTTAGTCTCAAAACCAAATGTAAAGTAGACTCCTTTTGGATGTTGTAGTCAGAAAGCGT 499009 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 ||| ||||| || | ||||||||| ||||| || |||| ||| ||||| || ||||| || Sbjct 499008 TCTGCCATCCTCCAACTGCTTACCAGCGAAAATCAGTCTTTGCTGGTCAGGTGGAATACC 498949 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 ||| || || || || || || ||||| || ||||| || || ||| ||||| | Sbjct 498948 TTCCTTATCCTGGATCTTGGATTTAACGTTGTCGATGGTATCAGAGGATTCGACTTCCAA 498889 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 ||| | ||||| || || | ||| || ||||| | ||||| Sbjct 498888 GGTGATGGTCTTACCGGTTAGAGTCTTGACGAAGATCTGCAT 498847 >seq6 Length=1504611 Score = 167 bits (184), Expect = 5e-36 Identities = 167/214 (78%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGG-CAAGAG 194977 ||| | ||||||||| | ||| | || || || |||||||| ||||| || | |||| | Sbjct 86294 TCTCAATCTCAAAACCAAGTGCAAGGTAGATTCCTTTTGAATGTTGTAGTCAGACAAG-G 86236 Query 194978 TTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGC 195037 |||| |||||||| | |||||||| || ||||| | || ||||||||| |||||||| | Sbjct 86235 TTCTGCCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGAGGAATAC 86176 Query 195038 CTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAA 195097 |||| ||||||||||| || ||||||||| ||||||||||| ||| ||| ||||| | Sbjct 86175 CTTCCTTGTCTTGAATCTTAGACTTGACGTTGTCAATGGTGTCTGAAGATTCGACTTCCA 86116 Query 195098 GGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAA 195131 |||| ||||| || ||||| || || || || Sbjct 86115 AAGTAATGGTCTTACCAGTCAAGGTCTTCACAAA 86082 >seq8 Length=1564113 Score = 149 bits (164), Expect = 1e-30 Identities = 166/222 (75%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| | ||||||||| | ||| | || ||||| ||||| || ||||| || | | ||| Sbjct 561011 TCTCAATCTCAAAACCAAGTGCAAGGTAGACTCCTTTTGGATGTTGTAGTCAGACAAAGT 561070 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 ||| |||||||| | |||||||| || ||||| | || ||||||||| || || || || Sbjct 561071 TCTGCCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACC 561130 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 || |||||||| || || |||||| || || || ||||| ||| || |||||||| Sbjct 561131 CTCCTTGTCTTGGATCTTGGACTTGACATTGTCGATAGTGTCAGAAGACTCGACTTCAAG 561190 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 ||||| ||||| || || || || || || || | |||||| Sbjct 561191 GGTAATTGTCTTACCGGTTAAGGTCTTAACAAAAATTTGCAT 561232 >seq2 Length=1086951 Score = 87.8 bits (96), Expect = 4e-12 Identities = 156/226 (69%), Gaps = 4/226 (2%) Strand=Plus/Minus Query 160514 TGGCACGTTGACATCTTTGACTTTGTCGA--TGCGAAAAAGCCCGGAGGTGATGACCTGA 160571 |||||| ||| ||||| ||||||||||| | || |||| || | || | || | Sbjct 390636 TGGCACTCTGATATCTTCGACTTTGTCGACATCCGGAAAAACCACG--GTAAGGAAGAAA 390579 Query 160572 TGAGAGCCAGAGAGATTTTCTACGCCATCTGGACTTCCGATCTTTTCATGAAGAGAGTGA 160631 | | |||||||| | ||| || | ||| | | ||| | |||||||||||||| Sbjct 390578 TCCGTGCCAGAGATTTGTTCCCTGCTCTATGGGTTCCAGATTTGTTCATGAAGAGAGTTC 390519 Query 160632 AAGACAATGGGGATTGGAGCCTTTTCTGTCCCAATGAAGCGCCTGGACTTGATGATGTTT 160691 |||| || || || |||| | | || | || | |||||| || || |||| ||||| | Sbjct 390518 AAGAGAACGGTGAATGGACCTTGTTTTCCCCTAGTGAAGCTCCCGGTCTTGCCGATGTCT 390459 Query 160692 ATGGTTCCGAGTTCGAGACTCTTTATGAAAGATACGAAAAAGAGGG 160737 ||||| || ||||| || | |||||| | |||| ||||||| Sbjct 390458 ATGGTGATGAATTCGAAGCTTTATATGAACGTTACGTGCAAGAGGG 390413 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109481486278136