Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lachancea_20fermentati_20[genbank_20GCA_5F900074765.1_202016-10-26]
8 sequences; 10,264,457 total letters
Query= NC_015326.1
Length=346754
Score E
Sequences producing significant alignments: (Bits) Value
seq4 170 4e-37
seq6 167 5e-36
seq8 149 1e-30
seq2 87.8 4e-12
>seq4
Length=1192607
Score = 170 bits (188), Expect = 4e-37
Identities = 171/222 (77%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978
||| || |||||||| | ||| | || || || ||||||||||||||||| | ||||||
Sbjct 499296 TCTTAGCCTCAAAACCAAGTGTAAGGTAGATTCCTTTTGAATATTGTAATCAGAAAGAGT 499237
Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038
||| ||||| || | |||||||| ||||| || | || ||| ||||| || ||||| ||
Sbjct 499236 TCTGCCATCCTCCAATTGCTTACCGGCGAAAATCAATCTTTGCTGGTCAGGTGGAATACC 499177
Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098
||| ||||||||||| || ||||| || || ||||| || || ||| ||||| |
Sbjct 499176 TTCCTTGTCTTGAATCTTGGATTTGACATTGTCGATGGTATCAGAGGATTCGACTTCCAA 499117
Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
||||| ||||| ||||||||||| || ||||| | |||||
Sbjct 499116 GGTAATAGTCTTACCTGTCAAAGTCTTGACGAAAATCTGCAT 499075
Score = 158 bits (174), Expect = 3e-33
Identities = 168/222 (76%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978
||| ||||||||||| | || | ||| ||||| |||||||| ||||| || | ||| ||
Sbjct 499524 TCTTAGTCTCAAAACCAAATGTAAAGTAGACTCCTTTTGAATGTTGTAGTCAGAAAGCGT 499465
Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038
||| ||||| || | |||||||| ||||| || | || |||||||||||| ||||| ||
Sbjct 499464 TCTGCCATCCTCCAATTGCTTACCGGCGAAAATCAATCTTTGTTGGTCTGGTGGAATACC 499405
Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098
||| ||||||||||| || |||||||| || || ||||| ||| || || || |
Sbjct 499404 TTCCTTGTCTTGAATCTTGGATTTGACGTTGTCTATCGTGTCAGAAGACTCAACCTCCAA 499345
Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
|||| ||||| || || | ||| || ||||| | |||||
Sbjct 499344 AGTAATAGTCTTACCGGTTAGAGTCTTGACGAAGATCTGCAT 499303
Score = 158 bits (174), Expect = 3e-33
Identities = 168/222 (76%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978
||| | ||||||||| | ||| | || || || ||||||||||||||||| | ||||||
Sbjct 499980 TCTTAATCTCAAAACCAAGTGTAAGGTAGATTCCTTTTGAATATTGTAATCAGAAAGAGT 499921
Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038
||| ||||| || | |||||||| ||||| || | || ||| ||||| || ||||| ||
Sbjct 499920 TCTGCCATCCTCCAATTGCTTACCGGCGAAAATCAATCTTTGCTGGTCAGGTGGAATACC 499861
Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098
||| ||||||||||| || ||| ||||| || ||||| || || ||| ||||| |
Sbjct 499860 TTCCTTGTCTTGAATCTTGGACTTAACGTTGTCGATGGTATCAGAGGATTCGACTTCCAA 499801
Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
||| | ||||| || || | ||| || ||||| | |||||
Sbjct 499800 GGTGATGGTCTTACCGGTTAGAGTCTTGACGAAGATCTGCAT 499759
Score = 156 bits (172), Expect = 9e-33
Identities = 169/224 (75%), Gaps = 0/224 (0%)
Strand=Plus/Minus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978
||| || |||||||| ||||| | || || || ||||||||||||||||| | ||||||
Sbjct 498840 TCTTAGCCTCAAAACCAGGTGTAAGGTAGATTCCTTTTGAATATTGTAATCAGAAAGAGT 498781
Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038
||| ||||| || | ||||||||| ||||| || | || |||||| || || ||||| ||
Sbjct 498780 TCTGCCATCCTCCAACTGCTTACCAGCGAAAATCAATCTTTGTTGATCAGGTGGAATACC 498721
Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098
||| || || || || || |||||||| || ||||| || || ||| || || ||
Sbjct 498720 TTCCTTATCCTGGATCTTGGATTTGACGTTGTCGATGGTATCAGAGGATTCAACCTCCAG 498661
Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCATTT 195142
|| | ||||| || || ||||| || ||||| | |||||||
Sbjct 498660 AGTGATGGTCTTGCCGGTTAAAGTCTTGACGAAAATCTGCATTT 498617
Score = 152 bits (168), Expect = 1e-31
Identities = 167/222 (75%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978
||| ||||||||||| | ||| || |||||||| ||||| || ||||| || | ||| ||
Sbjct 499752 TCTTAGTCTCAAAACCAAGTGGAGCGTGGACTCCTTTTGGATGTTGTAGTCAGAAAGCGT 499693
Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038
||| ||||| || | ||||||||| ||||| || |||| ||| ||||| || || || ||
Sbjct 499692 TCTGCCATCCTCCAACTGCTTACCGGCGAAAATCAGTCTTTGCTGGTCAGGTGGGATACC 499633
Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098
||| ||||||||||| || || ||||| || || ||||| ||| || || || |
Sbjct 499632 TTCCTTGTCTTGAATCTTGGATTTAACGTTGTCTATCGTGTCAGAAGACTCAACCTCCAA 499573
Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
|| | ||||| || || ||||| || ||||| | |||||
Sbjct 499572 AGTGATGGTCTTACCGGTTAAAGTCTTGACGAAAATCTGCAT 499531
Score = 140 bits (154), Expect = 7e-28
Identities = 164/222 (74%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978
||| ||||||||||| | || | ||| ||||| ||||| || ||||| || | ||| ||
Sbjct 499068 TCTTAGTCTCAAAACCAAATGTAAAGTAGACTCCTTTTGGATGTTGTAGTCAGAAAGCGT 499009
Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038
||| ||||| || | ||||||||| ||||| || |||| ||| ||||| || ||||| ||
Sbjct 499008 TCTGCCATCCTCCAACTGCTTACCAGCGAAAATCAGTCTTTGCTGGTCAGGTGGAATACC 498949
Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098
||| || || || || || || ||||| || ||||| || || ||| ||||| |
Sbjct 498948 TTCCTTATCCTGGATCTTGGATTTAACGTTGTCGATGGTATCAGAGGATTCGACTTCCAA 498889
Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
||| | ||||| || || | ||| || ||||| | |||||
Sbjct 498888 GGTGATGGTCTTACCGGTTAGAGTCTTGACGAAGATCTGCAT 498847
>seq6
Length=1504611
Score = 167 bits (184), Expect = 5e-36
Identities = 167/214 (78%), Gaps = 2/214 (1%)
Strand=Plus/Minus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGG-CAAGAG 194977
||| | ||||||||| | ||| | || || || |||||||| ||||| || | |||| |
Sbjct 86294 TCTCAATCTCAAAACCAAGTGCAAGGTAGATTCCTTTTGAATGTTGTAGTCAGACAAG-G 86236
Query 194978 TTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGC 195037
|||| |||||||| | |||||||| || ||||| | || ||||||||| |||||||| |
Sbjct 86235 TTCTGCCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGAGGAATAC 86176
Query 195038 CTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAA 195097
|||| ||||||||||| || ||||||||| ||||||||||| ||| ||| ||||| |
Sbjct 86175 CTTCCTTGTCTTGAATCTTAGACTTGACGTTGTCAATGGTGTCTGAAGATTCGACTTCCA 86116
Query 195098 GGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAA 195131
|||| ||||| || ||||| || || || ||
Sbjct 86115 AAGTAATGGTCTTACCAGTCAAGGTCTTCACAAA 86082
>seq8
Length=1564113
Score = 149 bits (164), Expect = 1e-30
Identities = 166/222 (75%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978
||| | ||||||||| | ||| | || ||||| ||||| || ||||| || | | |||
Sbjct 561011 TCTCAATCTCAAAACCAAGTGCAAGGTAGACTCCTTTTGGATGTTGTAGTCAGACAAAGT 561070
Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038
||| |||||||| | |||||||| || ||||| | || ||||||||| || || || ||
Sbjct 561071 TCTGCCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACC 561130
Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098
|| |||||||| || || |||||| || || || ||||| ||| || ||||||||
Sbjct 561131 CTCCTTGTCTTGGATCTTGGACTTGACATTGTCGATAGTGTCAGAAGACTCGACTTCAAG 561190
Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
||||| ||||| || || || || || || || | ||||||
Sbjct 561191 GGTAATTGTCTTACCGGTTAAGGTCTTAACAAAAATTTGCAT 561232
>seq2
Length=1086951
Score = 87.8 bits (96), Expect = 4e-12
Identities = 156/226 (69%), Gaps = 4/226 (2%)
Strand=Plus/Minus
Query 160514 TGGCACGTTGACATCTTTGACTTTGTCGA--TGCGAAAAAGCCCGGAGGTGATGACCTGA 160571
|||||| ||| ||||| ||||||||||| | || |||| || | || | || |
Sbjct 390636 TGGCACTCTGATATCTTCGACTTTGTCGACATCCGGAAAAACCACG--GTAAGGAAGAAA 390579
Query 160572 TGAGAGCCAGAGAGATTTTCTACGCCATCTGGACTTCCGATCTTTTCATGAAGAGAGTGA 160631
| | |||||||| | ||| || | ||| | | ||| | ||||||||||||||
Sbjct 390578 TCCGTGCCAGAGATTTGTTCCCTGCTCTATGGGTTCCAGATTTGTTCATGAAGAGAGTTC 390519
Query 160632 AAGACAATGGGGATTGGAGCCTTTTCTGTCCCAATGAAGCGCCTGGACTTGATGATGTTT 160691
|||| || || || |||| | | || | || | |||||| || || |||| ||||| |
Sbjct 390518 AAGAGAACGGTGAATGGACCTTGTTTTCCCCTAGTGAAGCTCCCGGTCTTGCCGATGTCT 390459
Query 160692 ATGGTTCCGAGTTCGAGACTCTTTATGAAAGATACGAAAAAGAGGG 160737
||||| || ||||| || | |||||| | |||| |||||||
Sbjct 390458 ATGGTGATGAATTCGAAGCTTTATATGAACGTTACGTGCAAGAGGG 390413
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1109481486278136
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |