Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lachancea_20fermentati_20[genbank_20GCA_5F900074765.1_202016-10-26] 8 sequences; 10,264,457 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq4 114 8e-21 >seq4 Length=1192607 Score = 114 bits (126), Expect = 8e-21 Identities = 155/216 (72%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 34767 CTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCA 34826 |||||||||||||| | ||| || || || ||||| ||||| ||||| ||| || Sbjct 499745 CTCAAAACCAAGTGGAGCGTGGACTCCTTTTGGATGTTGTAGTCAGAAAGCGTTCTGCCA 499686 Query 34827 TCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTG 34886 || |||| ||| || ||||| || || |||| ||||||||| | || | || |||||| Sbjct 499685 TCCTCCAACTGCTTACCGGCGAAAATCAGTCTTTGCTGGTCAGGTGGGATACCTTCCTTG 499626 Query 34887 TCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATG 34946 || |||||| ||| ||| |||||| ||| | |||||| || | || ||| Sbjct 499625 TCTTGAATCTTGGATTTAACGTTGTCTATCGTGTCAGAAGACTCAACCTCCAAAGTGATG 499566 Query 34947 GTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || || || || | |||||| || || ||||||||| Sbjct 499565 GTCTTACCGGTTAAAGTCTTGACGAAAATCTGCATA 499530 Score = 111 bits (122), Expect = 1e-19 Identities = 154/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 34767 CTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCA 34826 ||||||||||| || | || || || |||||||| ||||| ||||| ||| || Sbjct 499517 CTCAAAACCAAATGTAAAGTAGACTCCTTTTGAATGTTGTAGTCAGAAAGCGTTCTGCCA 499458 Query 34827 TCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTG 34886 || |||| || || ||||| || || | || ||| |||||| | || | || |||||| Sbjct 499457 TCCTCCAATTGCTTACCGGCGAAAATCAATCTTTGTTGGTCTGGTGGAATACCTTCCTTG 499398 Query 34887 TCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATG 34946 || |||||| ||||||| |||||| ||| | |||||| || | || || Sbjct 499397 TCTTGAATCTTGGATTTGACGTTGTCTATCGTGTCAGAAGACTCAACCTCCAAAGTAATA 499338 Query 34947 GTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || || || || |||||||| || |||||||||||| Sbjct 499337 GTCTTACCGGTTAGAGTCTTGACGAAGATCTGCATA 499302 Score = 104 bits (114), Expect = 2e-17 Identities = 162/232 (70%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 34751 ATTTCCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTC 34810 ||| || || || || |||||||||||||| | || ||| || ||||| || || || Sbjct 499989 ATTACCACCTCTTAATCTCAAAACCAAGTGTAAGGTAGATTCCTTTTGAATATTGTAATC 499930 Query 34811 CGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTG 34870 ||||| ||| |||| |||| || || ||||| || || | || ||||||||| | Sbjct 499929 AGAAAGAGTTCTGCCATCCTCCAATTGCTTACCGGCGAAAATCAATCTTTGCTGGTCAGG 499870 Query 34871 CGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTC 34930 || | || |||||||| |||||| || ||| | || | ||| || || Sbjct 499869 TGGAATACCTTCCTTGTCTTGAATCTTGGACTTAACGTTGTCGATGGTATCAGAGGATTC 499810 Query 34931 AACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || || | ||| ||||| || || || |||||||| || |||||||||||| Sbjct 499809 GACTTCCAAGGTGATGGTCTTACCGGTTAGAGTCTTGACGAAGATCTGCATA 499758 Score = 93.3 bits (102), Expect = 3e-14 Identities = 150/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 34767 CTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCA 34826 ||||||||||| || | || || || || ||||| ||||| ||||| ||| || Sbjct 499061 CTCAAAACCAAATGTAAAGTAGACTCCTTTTGGATGTTGTAGTCAGAAAGCGTTCTGCCA 499002 Query 34827 TCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTG 34886 || |||| ||| || || || || || |||| ||||||||| | || | || ||||| Sbjct 499001 TCCTCCAACTGCTTACCAGCGAAAATCAGTCTTTGCTGGTCAGGTGGAATACCTTCCTTA 498942 Query 34887 TCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATG 34946 || ||||| ||| ||| | || | ||| || || || || | ||| ||| Sbjct 498941 TCCTGGATCTTGGATTTAACGTTGTCGATGGTATCAGAGGATTCGACTTCCAAGGTGATG 498882 Query 34947 GTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || || || || |||||||| || |||||||||||| Sbjct 498881 GTCTTACCGGTTAGAGTCTTGACGAAGATCTGCATA 498846 Score = 93.3 bits (102), Expect = 3e-14 Identities = 161/232 (69%), Gaps = 8/232 (3%) Strand=Plus/Minus Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814 || || || | ||||||||||||||| | || ||| || ||||| || || || ||| Sbjct 499301 CCACCTCTTAGCCTCAAAACCAAGTGTAAGGTAGATTCCTTTTGAATATTGTAATCAGAA 499242 Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874 || ||| |||| |||| || || ||||| || || | || ||||||||| | || Sbjct 499241 AGAGTTCTGCCATCCTCCAATTGCTTACCGGCGAAAATCAATCTTTGCTGGTCAGGTGGA 499182 Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGAT----TCACCGGCCTC 34930 | || |||||||| |||||| |||||| || | ||||| ||| || || Sbjct 499181 ATACCTTCCTTGTCTTGAATCTTGGATTTGAC--AT--TGTCGATGGTATCAGAGGATTC 499126 Query 34931 AACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || || | ||| || || || || || | |||||| || || ||||||||| Sbjct 499125 GACTTCCAAGGTAATAGTCTTACCTGTCAAAGTCTTGACGAAAATCTGCATA 499074 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324633568348224