Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lachancea_20fermentati_20[genbank_20GCA_5F900074765.1_202016-10-26]
8 sequences; 10,264,457 total letters
Query= NC_019495.1
Length=290304
Score E
Sequences producing significant alignments: (Bits) Value
seq1 210 4e-49
>seq1
Length=762788
Score = 210 bits (232), Expect = 4e-49
Identities = 550/830 (66%), Gaps = 38/830 (5%)
Strand=Plus/Minus
Query 25512 CTGGACCGCCGAAGAGATTGATCTGGCCAAGGACATGGACGGCTGGTACGCTCTATCCAA 25571
|||||||||||| ||||| ||| || ||||||| || ||| |||| || | ||
Sbjct 619737 CTGGACCGCCGAGGAGATCGATTTGTCCAAGGATATTCACGACTGGAACAACCG---CAT 619681
Query 25572 AGACGAGCAGCA---TTT-----TCTCAAGTACGTGTTGGCATTCTTTGCAGCCTCTGAT 25623
||||||| | ||| |||| || ||||||||||||||||| || || ||
Sbjct 619680 GAACGAGCACGAACGTTTCTTCCTCTCGCGT--GTGTTGGCATTCTTTGCTGCGTCCGAC 619623
Query 25624 GGTATAGTGAACGAGAATCTGTGCGAGAGATTCACCAGGGAAGTGCAGTACGTGGAGGCC 25683
||||| || |||||||| || ||||| ||| | ||||| || | || |||
Sbjct 619622 GGTATTGTCAACGAGAACTTGGTCGAGAACTTCTCAGCCGAAGTTCAAATCCCAGAAGCC 619563
Query 25684 AAGTGTTTCTACGGTTTCCAGATGGCCATCGAAAATGTGCACTCTGAGGTGTATGCCAAG 25743
||||| || ||||| |||||||| || ||||| | ||||| ||| || |
Sbjct 619562 AAGTGCTTTTACGGGTTCCAGATCATGATGGAAAACATCCACTCCGAGACCTACTCT--- 619506
Query 25744 CTTCTGATG---ACGTACATTACAGACGTCGCCGAGAGAGATCGGCTGTTTGGTGCCATC 25800
|| ||||| || ||||| | |||| | ||||| ||| || || ||||||
Sbjct 619505 CTGCTGATTGACACCTACATCAAAGACCCCAAGGAGAGCGATTTCCTATTCAATGCCATT 619446
Query 25801 GAGCACATACC-CAGCATCAAGAGGAAGGCGCGGTGGGCCATGAAGTGGATCAACAGCCA 25859
|| | || || ||| |||||| |||||| |||||||| | |||||| | | |
Sbjct 619445 GAAAATATTCCTCAG-ATCAAGGAGAAGGCCGAATGGGCCATCAGATGGATCCAGGACGA 619387
Query 25860 -GAG-CGCTACGTTTGGCGAGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTC 25917
||| | ||| |||| ||| | |||| ||||||||||| ||||| || | || |||
Sbjct 619386 AGAGGCCCTA--TTTGCAGAGAGATTGGTCGCCTTTGCTGCCGTGGAAGGTGTTTTCTTC 619329
Query 25918 AGCGGTTCGTTTGCGGCCATCTTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTAC 25977
||| || ||||| || || |||||||| ||| |||| || |||||||| ||
Sbjct 619328 TCCGGATCCTTTGCCGCTATTTTCTGGCTAAAGAAGAAAGGTTTGATGCCCGGTCTAACG 619269
Query 25978 TTTTCCAACGAGCTCATCAGCAGGGACGAGGGTCTCCACAGAGATTTTGCCTGCCTGCTC 26037
|| || || ||||| || |||| ||||||||||| |||| |||||||| || || ||
Sbjct 619268 TTCTCTAATGAGCTAATTTGCAGAGACGAGGGTCTTCACACTGATTTTGCATGTCTTCTA 619209
Query 26038 TACACGGGCCACTTGCTCCACAAACCTTCTCAAGAGACCGTCTACAGTATCATCAAAGAG 26097
| || |||||| |||| ||| || | ||| || | || ||||| | |||
Sbjct 619208 TTTGCG---CACTTGAAGAACAAGCCTGATCCAAAGATTGTTGAGAGAATCATTACTGAG 619152
Query 26098 GCTGTGGAGATCGAGAAG-GA-GTTTCNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGGCA 26155
||||| || ||||| ||| || |||| | || |
Sbjct 619151 GCTGTCGAAATCGAAAAGAGATATTTC--ATCGATGCCCTACCAGTGTCCCTACTTGGTA 619094
Query 26156 TGAACAACAGACTCATGAGCCAATACATTGAGTATGTGGCCGACCATCTGCT-GTGCCAG 26214
||||| | || |||| |||||| |||| | ||| |||||| ||||| || |
Sbjct 619093 TGAACGCCGACCTAATGAACCAATATGTTGAATTTGTTGCCGACAGACTGCTAGTTGCTC 619034
Query 26215 CTGGGACTCGCCAG--ACTCTACAGTACGCCTAACCCGTTCGACTTTATGGAAAACATAT 26272
||| | || || || || |||| ||||| ||||| |||||||||||||| |
Sbjct 619033 TTGGCAATCAAAAGTATTTCAACGTTACG---AACCCATTCGATTTTATGGAAAACATTT 618977
Query 26273 CGTTGGAAGGGAAGACCAACTTCTTTGAAAAGAGGGTCGGCGACTATCAA 26322
| |||| || |||||||||||||| |||||||| || ||||| |||
Sbjct 618976 CTTTGGCTGGTAAGACCAACTTCTTCGAAAAGAGAGTGTCTGACTACCAA 618927
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 928844707115520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |