Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lachancea_20fermentati_20[genbank_20GCA_5F900074765.1_202016-10-26] 8 sequences; 10,264,457 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq1 210 4e-49 >seq1 Length=762788 Score = 210 bits (232), Expect = 4e-49 Identities = 550/830 (66%), Gaps = 38/830 (5%) Strand=Plus/Minus Query 25512 CTGGACCGCCGAAGAGATTGATCTGGCCAAGGACATGGACGGCTGGTACGCTCTATCCAA 25571 |||||||||||| ||||| ||| || ||||||| || ||| |||| || | || Sbjct 619737 CTGGACCGCCGAGGAGATCGATTTGTCCAAGGATATTCACGACTGGAACAACCG---CAT 619681 Query 25572 AGACGAGCAGCA---TTT-----TCTCAAGTACGTGTTGGCATTCTTTGCAGCCTCTGAT 25623 ||||||| | ||| |||| || ||||||||||||||||| || || || Sbjct 619680 GAACGAGCACGAACGTTTCTTCCTCTCGCGT--GTGTTGGCATTCTTTGCTGCGTCCGAC 619623 Query 25624 GGTATAGTGAACGAGAATCTGTGCGAGAGATTCACCAGGGAAGTGCAGTACGTGGAGGCC 25683 ||||| || |||||||| || ||||| ||| | ||||| || | || ||| Sbjct 619622 GGTATTGTCAACGAGAACTTGGTCGAGAACTTCTCAGCCGAAGTTCAAATCCCAGAAGCC 619563 Query 25684 AAGTGTTTCTACGGTTTCCAGATGGCCATCGAAAATGTGCACTCTGAGGTGTATGCCAAG 25743 ||||| || ||||| |||||||| || ||||| | ||||| ||| || | Sbjct 619562 AAGTGCTTTTACGGGTTCCAGATCATGATGGAAAACATCCACTCCGAGACCTACTCT--- 619506 Query 25744 CTTCTGATG---ACGTACATTACAGACGTCGCCGAGAGAGATCGGCTGTTTGGTGCCATC 25800 || ||||| || ||||| | |||| | ||||| ||| || || |||||| Sbjct 619505 CTGCTGATTGACACCTACATCAAAGACCCCAAGGAGAGCGATTTCCTATTCAATGCCATT 619446 Query 25801 GAGCACATACC-CAGCATCAAGAGGAAGGCGCGGTGGGCCATGAAGTGGATCAACAGCCA 25859 || | || || ||| |||||| |||||| |||||||| | |||||| | | | Sbjct 619445 GAAAATATTCCTCAG-ATCAAGGAGAAGGCCGAATGGGCCATCAGATGGATCCAGGACGA 619387 Query 25860 -GAG-CGCTACGTTTGGCGAGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTC 25917 ||| | ||| |||| ||| | |||| ||||||||||| ||||| || | || ||| Sbjct 619386 AGAGGCCCTA--TTTGCAGAGAGATTGGTCGCCTTTGCTGCCGTGGAAGGTGTTTTCTTC 619329 Query 25918 AGCGGTTCGTTTGCGGCCATCTTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTAC 25977 ||| || ||||| || || |||||||| ||| |||| || |||||||| || Sbjct 619328 TCCGGATCCTTTGCCGCTATTTTCTGGCTAAAGAAGAAAGGTTTGATGCCCGGTCTAACG 619269 Query 25978 TTTTCCAACGAGCTCATCAGCAGGGACGAGGGTCTCCACAGAGATTTTGCCTGCCTGCTC 26037 || || || ||||| || |||| ||||||||||| |||| |||||||| || || || Sbjct 619268 TTCTCTAATGAGCTAATTTGCAGAGACGAGGGTCTTCACACTGATTTTGCATGTCTTCTA 619209 Query 26038 TACACGGGCCACTTGCTCCACAAACCTTCTCAAGAGACCGTCTACAGTATCATCAAAGAG 26097 | || |||||| |||| ||| || | ||| || | || ||||| | ||| Sbjct 619208 TTTGCG---CACTTGAAGAACAAGCCTGATCCAAAGATTGTTGAGAGAATCATTACTGAG 619152 Query 26098 GCTGTGGAGATCGAGAAG-GA-GTTTCNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGGCA 26155 ||||| || ||||| ||| || |||| | || | Sbjct 619151 GCTGTCGAAATCGAAAAGAGATATTTC--ATCGATGCCCTACCAGTGTCCCTACTTGGTA 619094 Query 26156 TGAACAACAGACTCATGAGCCAATACATTGAGTATGTGGCCGACCATCTGCT-GTGCCAG 26214 ||||| | || |||| |||||| |||| | ||| |||||| ||||| || | Sbjct 619093 TGAACGCCGACCTAATGAACCAATATGTTGAATTTGTTGCCGACAGACTGCTAGTTGCTC 619034 Query 26215 CTGGGACTCGCCAG--ACTCTACAGTACGCCTAACCCGTTCGACTTTATGGAAAACATAT 26272 ||| | || || || || |||| ||||| ||||| |||||||||||||| | Sbjct 619033 TTGGCAATCAAAAGTATTTCAACGTTACG---AACCCATTCGATTTTATGGAAAACATTT 618977 Query 26273 CGTTGGAAGGGAAGACCAACTTCTTTGAAAAGAGGGTCGGCGACTATCAA 26322 | |||| || |||||||||||||| |||||||| || ||||| ||| Sbjct 618976 CTTTGGCTGGTAAGACCAACTTCTTCGAAAAGAGAGTGTCTGACTACCAA 618927 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928844707115520