Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lachancea_20fermentati_20[genbank_20GCA_5F900074765.1_202016-10-26] 8 sequences; 10,264,457 total letters Query= NC_019945.1 Length=132978 Score E Sequences producing significant alignments: (Bits) Value seq8 118 9e-22 seq6 102 7e-17 >seq8 Length=1564113 Score = 118 bits (130), Expect = 9e-22 Identities = 164/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 28551 AAAATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCT 28610 || |||||||| ||||| || || ||||| ||||| || |||||| ||| || || Sbjct 561235 AAGATGCAAATTTTTGTTAAGACCTTAACCGGTAAGACAATTACCCTTGAAGTCGAGTCT 561176 Query 28611 TCAGAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGAT 28670 || || || | | | || ||||| || ||| ||||| ||||| | || || Sbjct 561175 TCTGACACTATCGACAATGTCAAGTCCAAGATCCAAGACAAGGAGGGTATCCCACCTGAC 561116 Query 28671 CAACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTAT 28730 ||||| ||| | |||||||| || || |||||||||||| | |||| || | || || Sbjct 561115 CAACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGCAGAACTTTGTCTGACTAC 561056 Query 28731 AACATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGG 28780 ||||| ||||| || ||||| ||||| |||| || ||||| |||| || Sbjct 561055 AACATCCAAAAGGAGTCTACCTTGCACTTGGTTTTGAGATTGAGAGGTGG 561006 >seq6 Length=1504611 Score = 102 bits (112), Expect = 7e-17 Identities = 157/224 (70%), Gaps = 0/224 (0%) Strand=Plus/Plus Query 28563 TTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCAGAGACGGTG 28622 ||||| || || || || ||||| |||||||| ||| ||| ||||||| || | Sbjct 86082 TTTGTGAAGACCTTGACTGGTAAGACCATTACTTTGGAAGTCGAATCTTCAGACACCATT 86141 Query 28623 GCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAACAGAGACTT 28682 | | | ||||| || || ||||| || || | || || ||||| ||| | Sbjct 86142 GACAACGTCAAGTCTAAGATTCAAGACAAGGAAGGTATTCCTCCTGACCAACAAAGATTG 86201 Query 28683 ATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAACATTCAAAAA 28742 |||||||| || || |||||||||||| | ||| || | || || ||||||||||| Sbjct 86202 ATCTTTGCTGGTAAGCAATTGGAAGATGGCAGAACCTTGTCTGACTACAACATTCAAAAG 86261 Query 28743 GAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGATAAT 28786 |||||||| ||||| |||| || ||||| |||| || || || Sbjct 86262 GAATCTACCTTGCACTTGGTTTTGAGATTGAGAGGTGGTATCAT 86305 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425404758523032