Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lachancea_20fermentati_20[genbank_20GCA_5F900074765.1_202016-10-26]
8 sequences; 10,264,457 total letters
Query= NC_020842.1
Length=79114
Score E
Sequences producing significant alignments: (Bits) Value
seq2 136 2e-27
seq7 107 1e-18
>seq2
Length=1086951
Score = 136 bits (150), Expect = 2e-27
Identities = 307/459 (67%), Gaps = 2/459 (0%)
Strand=Plus/Plus
Query 25906 CCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCTGGAATCCACATTGCATAAAA 25965
||| ||| | || | | |||| ||| ||| || |||||||||| ||| | ||| ||
Sbjct 390502 CCATTCACCGTTCTCTTGAACTCTCTTCATGAACAAATCTGGAACCCATAGAGCAGGGAA 390561
Query 25966 TAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTTTTTTAGATCTAAGAAATCAAA 26025
|||||||| || | |||||||| || ||||| || || | || | || || ||
Sbjct 390562 CAAATCTCTGGCACGGATTTCTTCCTTACCGTGGTTTTTCCGGATGTCGACAAAGTCGAA 390621
Query 26026 AATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAACTACCTTTTCTTTTTCCTCCACC 26085
||||| ||||||||||||||||| || || |||||| |||| ||| || |||||
Sbjct 390622 GATATCAGAGTGCCATGGTTCTAAGTAAATTGCAAAAGCACCTGGTCTCTTGTTGCCACC 390681
Query 26086 TTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCAACATTGGAACTAAT-CCAGTTG 26144
|||||| ||||| | ||||| | ||| | || | ||| || | |||| ||| | |
Sbjct 390682 TTGATCAACGTAACGAGCAGTGTTGTTGTATACACGAACCATGGGGA-TAATACCATTCG 390740
Query 26145 AAAATCCGTTTGTGCTATGAATCTTGGATCCTGTCGATCTAATATCGTGAGCATGAATAC 26204
|| ||||| || | ||| | ||| ||||| || | ||| | ||| || | |
Sbjct 390741 AAGTACCGTTGGTACCTGCAATGTAGGAGCCTGTAGAACGAATGTTGTGGATGTGCAATC 390800
Query 26205 CGATTCCACCAGCCCATTTTGAAATAGCTGCACAATCTGAAACTGTATCGAAAATTCCTT 26264
|||| || || || || || || ||||| ||| | |||||| | || ||||
Sbjct 390801 CGATACCGCCCGCAGTCTTGGAGATCATGGCACATTCTTTCAAAGTATCGTAGATACCTT 390860
Query 26265 TTATGCTATCACCTTTCATTCCTAATAAAAAACAAGAAGATAATTGCGAATGAGTTGTTC 26324
||| || ||||||| ||| | ||||| ||||| | || | ||||| || |
Sbjct 390861 CGATGGAGTCCTCTTTCATGGCTACCAGGAAACAGGAAGACATCTGAGGATGAGGAGTAC 390920
Query 26325 CTGAATTAAATAATGTCGGTGTAGCATGAGTATAATATC 26363
| | || ||||| || || | || ||||| ||||||
Sbjct 390921 CGGCGTTGAATAACGTGGGCGATGCGTGAGTGAAATATC 390959
>seq7
Length=1626734
Score = 107 bits (118), Expect = 1e-18
Identities = 173/244 (71%), Gaps = 6/244 (2%)
Strand=Plus/Plus
Query 25906 CCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCTGGAATCCACATTGCATAAAA 25965
||| || |||| | |||||| || ||||||||| || |||||||| | ||||| ||
Sbjct 862032 CCAGTCTTCATTATTCTCAACGCGCTTCATAAATAAGTCAGGAATCCAGAGAGCATAGAA 862091
Query 25966 TAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTTTTTTAGATCTAAGAAATCAAA 26025
| ||| | ||||||| |||||||||||| || ||||| || | ||| || |||||
Sbjct 862092 AAGATCCCGTGCTCTCAATTCTTCTTTTCCATGGTTCTTCCGAAGTTGTAAAAAGTCAAA 862151
Query 26026 AATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAA-CTACC--TTTTCTTTTTCCTCC 26082
||| || | ||||| || |||| || || |||||| ||| |||| ||| ||
Sbjct 862152 AATGTCACAATGCCAAGGCTCTAGGTATAT-GCAAAAGGCACCCGGCCTCTTATTC--CC 862208
Query 26083 ACCTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCAACATTGGAACTAATCCAGT 26142
||||||||| ||||| | || || | |||||||| | ||| ||||| | ||| |
Sbjct 862209 ACCTTGATCAACGTAGCGAGCTGTGTTGTTGAAAACACGTAGCATAGGAACCAGACCATT 862268
Query 26143 TGAA 26146
|||
Sbjct 862269 CGAA 862272
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 253039975328600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |