Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lachancea_20fermentati_20[genbank_20GCA_5F900074765.1_202016-10-26] 8 sequences; 10,264,457 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq2 136 2e-27 seq7 107 1e-18 >seq2 Length=1086951 Score = 136 bits (150), Expect = 2e-27 Identities = 307/459 (67%), Gaps = 2/459 (0%) Strand=Plus/Plus Query 25906 CCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCTGGAATCCACATTGCATAAAA 25965 ||| ||| | || | | |||| ||| ||| || |||||||||| ||| | ||| || Sbjct 390502 CCATTCACCGTTCTCTTGAACTCTCTTCATGAACAAATCTGGAACCCATAGAGCAGGGAA 390561 Query 25966 TAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTTTTTTAGATCTAAGAAATCAAA 26025 |||||||| || | |||||||| || ||||| || || | || | || || || Sbjct 390562 CAAATCTCTGGCACGGATTTCTTCCTTACCGTGGTTTTTCCGGATGTCGACAAAGTCGAA 390621 Query 26026 AATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAACTACCTTTTCTTTTTCCTCCACC 26085 ||||| ||||||||||||||||| || || |||||| |||| ||| || ||||| Sbjct 390622 GATATCAGAGTGCCATGGTTCTAAGTAAATTGCAAAAGCACCTGGTCTCTTGTTGCCACC 390681 Query 26086 TTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCAACATTGGAACTAAT-CCAGTTG 26144 |||||| ||||| | ||||| | ||| | || | ||| || | |||| ||| | | Sbjct 390682 TTGATCAACGTAACGAGCAGTGTTGTTGTATACACGAACCATGGGGA-TAATACCATTCG 390740 Query 26145 AAAATCCGTTTGTGCTATGAATCTTGGATCCTGTCGATCTAATATCGTGAGCATGAATAC 26204 || ||||| || | ||| | ||| ||||| || | ||| | ||| || | | Sbjct 390741 AAGTACCGTTGGTACCTGCAATGTAGGAGCCTGTAGAACGAATGTTGTGGATGTGCAATC 390800 Query 26205 CGATTCCACCAGCCCATTTTGAAATAGCTGCACAATCTGAAACTGTATCGAAAATTCCTT 26264 |||| || || || || || || ||||| ||| | |||||| | || |||| Sbjct 390801 CGATACCGCCCGCAGTCTTGGAGATCATGGCACATTCTTTCAAAGTATCGTAGATACCTT 390860 Query 26265 TTATGCTATCACCTTTCATTCCTAATAAAAAACAAGAAGATAATTGCGAATGAGTTGTTC 26324 ||| || ||||||| ||| | ||||| ||||| | || | ||||| || | Sbjct 390861 CGATGGAGTCCTCTTTCATGGCTACCAGGAAACAGGAAGACATCTGAGGATGAGGAGTAC 390920 Query 26325 CTGAATTAAATAATGTCGGTGTAGCATGAGTATAATATC 26363 | | || ||||| || || | || ||||| |||||| Sbjct 390921 CGGCGTTGAATAACGTGGGCGATGCGTGAGTGAAATATC 390959 >seq7 Length=1626734 Score = 107 bits (118), Expect = 1e-18 Identities = 173/244 (71%), Gaps = 6/244 (2%) Strand=Plus/Plus Query 25906 CCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCTGGAATCCACATTGCATAAAA 25965 ||| || |||| | |||||| || ||||||||| || |||||||| | ||||| || Sbjct 862032 CCAGTCTTCATTATTCTCAACGCGCTTCATAAATAAGTCAGGAATCCAGAGAGCATAGAA 862091 Query 25966 TAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTTTTTTAGATCTAAGAAATCAAA 26025 | ||| | ||||||| |||||||||||| || ||||| || | ||| || ||||| Sbjct 862092 AAGATCCCGTGCTCTCAATTCTTCTTTTCCATGGTTCTTCCGAAGTTGTAAAAAGTCAAA 862151 Query 26026 AATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAA-CTACC--TTTTCTTTTTCCTCC 26082 ||| || | ||||| || |||| || || |||||| ||| |||| ||| || Sbjct 862152 AATGTCACAATGCCAAGGCTCTAGGTATAT-GCAAAAGGCACCCGGCCTCTTATTC--CC 862208 Query 26083 ACCTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCAACATTGGAACTAATCCAGT 26142 ||||||||| ||||| | || || | |||||||| | ||| ||||| | ||| | Sbjct 862209 ACCTTGATCAACGTAGCGAGCTGTGTTGTTGAAAACACGTAGCATAGGAACCAGACCATT 862268 Query 26143 TGAA 26146 ||| Sbjct 862269 CGAA 862272 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 253039975328600