Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lachancea_20fermentati_20[genbank_20GCA_5F900074765.1_202016-10-26] 8 sequences; 10,264,457 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value seq8 141 2e-28 seq4 140 6e-28 seq6 123 4e-23 >seq8 Length=1564113 Score = 141 bits (156), Expect = 2e-28 Identities = 170/231 (74%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 193133 ACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGA 193192 |||||||||||||| | |||| ||||| |||| ||| || || || ||||| || Sbjct 561005 ACCACCTCTCAATCTCAAAACCAAGTGCAAGGTAGACTCCTTTTGGATGTTGTAGTCAGA 561064 Query 193193 TAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGG 193252 || ||||| ||| || ||||| || || ||||| || ||||| ||||| ||||| || Sbjct 561065 CAAAGTTCTGCCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGG 561124 Query 193253 TATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAAC 193312 || || || || ||||| || |||| || | ||| ||||| || |||||||| || Sbjct 561125 GATACCCTCCTTGTCTTGGATCTTGGACTTGACATTGTCGATAGTGTCAGAAGACTCGAC 561184 Query 193313 TTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATTTT 193363 ||| || || || || ||||| |||| || || ||||| |||||||| || Sbjct 561185 TTCAAGGGTAATTGTCTTACCGGTTAAGGTCTTAACAAAAATTTGCATCTT 561235 >seq4 Length=1192607 Score = 140 bits (154), Expect = 6e-28 Identities = 169/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 ||||||||||| | || | |||| ||| || |||| ||| || ||| || ||||| Sbjct 499532 ATACCACCTCTTAGTCTCAAAACCAAATGTAAAGTAGACTCCTTTTGAATGTTGTAGTCA 499473 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 || | |||||| ||| || ||||| || ||||| ||||| ||||| ||||| || || Sbjct 499472 GAAAGCGTTCTGCCATCCTCCAATTGCTTACCGGCGAAAATCAATCTTTGTTGGTCTGGT 499413 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || || ||||| || ||||| || |||| ||| | || || || || ||||||||| Sbjct 499412 GGAATACCTTCCTTGTCTTGAATCTTGGATTTGACGTTGTCTATCGTGTCAGAAGACTCA 499353 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || || | ||| ||||| ||||| ||||| || || || || || ||||| Sbjct 499352 ACCTCCAAAGTAATAGTCTTACCGGTTAGAGTCTTGACGAAGATCTGCAT 499303 Score = 118 bits (130), Expect = 2e-21 Identities = 166/233 (71%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 ||||||||||| | | | ||||| || || |||| || || |||||| || || Sbjct 498848 ATACCACCTCTTAGCCTCAAAACCAGGTGTAAGGTAGATTCCTTTTGAATATTGTAATCA 498789 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 || | ||||| ||| || || || || || || ||||| ||||| ||||||||||| Sbjct 498788 GAAAGAGTTCTGCCATCCTCCAACTGCTTACCAGCGAAAATCAATCTTTGTTGATCAGGT 498729 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || || ||||| ||||| || || |||| ||| | || || ||||| || || ||| Sbjct 498728 GGAATACCTTCCTTATCCTGGATCTTGGATTTGACGTTGTCGATGGTATCAGAGGATTCA 498669 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATTTT 193363 || || ||||| || || || || |||| || || || || || |||||||| Sbjct 498668 ACCTCCAGAGTGATGGTCTTGCCGGTTAAAGTCTTGACGAAAATCTGCATTTT 498616 Score = 113 bits (124), Expect = 8e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 ||||||||||| | | | |||| || || |||| || || |||||| || || Sbjct 499304 ATACCACCTCTTAGCCTCAAAACCAAGTGTAAGGTAGATTCCTTTTGAATATTGTAATCA 499245 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 || | ||||| ||| || ||||| || ||||| ||||| ||||| || || ||||| Sbjct 499244 GAAAGAGTTCTGCCATCCTCCAATTGCTTACCGGCGAAAATCAATCTTTGCTGGTCAGGT 499185 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || || ||||| || ||||| || |||| ||| | ||| || ||||| || || || Sbjct 499184 GGAATACCTTCCTTGTCTTGAATCTTGGATTTGACATTGTCGATGGTATCAGAGGATTCG 499125 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 ||||| | || ||||| |||||||| | || || || || || ||||| Sbjct 499124 ACTTCCAAGGTAATAGTCTTACCTGTCAAAGTCTTGACGAAAATCTGCAT 499075 Score = 109 bits (120), Expect = 1e-18 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 ||||||||||| | || | |||| ||| || |||| ||| || || || ||||| Sbjct 499076 ATACCACCTCTTAGTCTCAAAACCAAATGTAAAGTAGACTCCTTTTGGATGTTGTAGTCA 499017 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 || | |||||| ||| || || || || || || ||||| | ||| || || ||||| Sbjct 499016 GAAAGCGTTCTGCCATCCTCCAACTGCTTACCAGCGAAAATCAGTCTTTGCTGGTCAGGT 498957 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || || ||||| ||||| || || |||| ||| | || || ||||| || || || Sbjct 498956 GGAATACCTTCCTTATCCTGGATCTTGGATTTAACGTTGTCGATGGTATCAGAGGATTCG 498897 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 ||||| | || || || ||||| ||||| || || || || || ||||| Sbjct 498896 ACTTCCAAGGTGATGGTCTTACCGGTTAGAGTCTTGACGAAGATCTGCAT 498847 Score = 104 bits (114), Expect = 4e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 ||||||||||| | || | |||| || | || | ||| || || || ||||| Sbjct 499760 ATACCACCTCTTAGTCTCAAAACCAAGTGGAGCGTGGACTCCTTTTGGATGTTGTAGTCA 499701 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 || | |||||| ||| || || || || ||||| ||||| | ||| || || ||||| Sbjct 499700 GAAAGCGTTCTGCCATCCTCCAACTGCTTACCGGCGAAAATCAGTCTTTGCTGGTCAGGT 499641 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || || ||||| || ||||| || |||| ||| | || || || || ||||||||| Sbjct 499640 GGGATACCTTCCTTGTCTTGAATCTTGGATTTAACGTTGTCTATCGTGTCAGAAGACTCA 499581 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || || | ||| || || ||||| |||| || || || || || ||||| Sbjct 499580 ACCTCCAAAGTGATGGTCTTACCGGTTAAAGTCTTGACGAAAATCTGCAT 499531 >seq6 Length=1504611 Score = 123 bits (136), Expect = 4e-23 Identities = 160/221 (72%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 |||||||||||||||| | |||| ||||| |||| || || ||| || ||||| Sbjct 86302 ATACCACCTCTCAATCTCAAAACCAAGTGCAAGGTAGATTCCTTTTGAATGTTGTAGTCA 86243 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 || || ||||| ||| || ||||| || || ||||| || ||||| ||||| |||||| Sbjct 86242 GACAAGGTTCTGCCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGA 86183 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || || ||||| || ||||| || || | || | || ||| || || ||||| || Sbjct 86182 GGAATACCTTCCTTGTCTTGAATCTTAGACTTGACGTTGTCAATGGTGTCTGAAGATTCG 86123 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAA 193351 ||||| | ||| || || ||||| || | || || ||||| Sbjct 86122 ACTTCCAAAGTAATGGTCTTACCAGTCAAGGTCTTCACAAA 86082 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 899654310034560