Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lachancea_20fermentati_20[genbank_20GCA_5F900074765.1_202016-10-26]
8 sequences; 10,264,457 total letters
Query= NC_021248.1
Length=307691
Score E
Sequences producing significant alignments: (Bits) Value
seq4 145 2e-29
seq8 141 2e-28
seq6 141 2e-28
>seq4
Length=1192607
Score = 145 bits (160), Expect = 2e-29
Identities = 174/234 (74%), Gaps = 2/234 (1%)
Strand=Plus/Minus
Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTC-TTTAGAGATATTATAATC 192365
||||||||||| || | || || | ||||| |||| || ||| || ||||| |||||
Sbjct 498848 ATACCACCTCTTAGCCTCAAAACCAGGTGTAAGGTAGATTCCTTTTGA-ATATTGTAATC 498790
Query 192366 AGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGG 192425
||| | |||| |||| ||||| || |||||||| || || ||||| |||||||||||
Sbjct 498789 AGAAAGAGTTCTGCCATCCTCCAACTGCTTACCAGCGAAAATCAATCTTTGTTGATCAGG 498730
Query 192426 TGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTC 192485
||| || ||||| ||||| || || || ||| || || || | ||| || |||||
Sbjct 498729 TGGAATACCTTCCTTATCCTGGATCTTGGATTTGACGTTGTCGATGGTATCAGAGGATTC 498670
Query 192486 TACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTTT 192539
|| || ||||| ||||| || || ||||| || || | || |||||||||||
Sbjct 498669 AACCTCCAGAGTGATGGTCTTGCCGGTTAAAGTCTTGACGAAAATCTGCATTTT 498616
Score = 134 bits (148), Expect = 3e-26
Identities = 170/231 (74%), Gaps = 2/231 (1%)
Strand=Plus/Minus
Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCT-CTTTAGAGATATTATAATC 192365
||||||||||| || | || || || ||||| |||| | |||| || ||||| |||||
Sbjct 499304 ATACCACCTCTTAGCCTCAAAACCAAGTGTAAGGTAGATTCCTTTTGA-ATATTGTAATC 499246
Query 192366 AGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGG 192425
||| | |||| |||| |||||||| ||||| || || || ||||| || || |||||
Sbjct 499245 AGAAAGAGTTCTGCCATCCTCCAATTGCTTACCGGCGAAAATCAATCTTTGCTGGTCAGG 499186
Query 192426 TGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTC 192485
||| || ||||| || ||||| || || ||| ||||| || | ||| || |||||
Sbjct 499185 TGGAATACCTTCCTTGTCTTGAATCTTGGATTTGACATTGTCGATGGTATCAGAGGATTC 499126
Query 192486 TACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536
||||| | ||||| || ||||| || || || || | || ||||||||
Sbjct 499125 GACTTCCAAGGTAATAGTCTTACCTGTCAAAGTCTTGACGAAAATCTGCAT 499075
Score = 131 bits (144), Expect = 3e-25
Identities = 167/230 (73%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366
||||||||||| || | || || ||||||||||||| ||| || ||| || || |||
Sbjct 499076 ATACCACCTCTTAGTCTCAAAACCAAATGTAAAGTAGACTCCTTTTGGATGTTGTAGTCA 499017
Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426
|| | |||| |||| ||||| || |||||||| || || | ||| || || ||||||
Sbjct 499016 GAAAGCGTTCTGCCATCCTCCAACTGCTTACCAGCGAAAATCAGTCTTTGCTGGTCAGGT 498957
Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486
|| || ||||| ||||| || || || ||| || || || | ||| || |||||
Sbjct 498956 GGAATACCTTCCTTATCCTGGATCTTGGATTTAACGTTGTCGATGGTATCAGAGGATTCG 498897
Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536
||||| | || ||||| ||||| |||| || || | || ||||||||
Sbjct 498896 ACTTCCAAGGTGATGGTCTTACCGGTTAGAGTCTTGACGAAGATCTGCAT 498847
Score = 131 bits (144), Expect = 3e-25
Identities = 169/231 (73%), Gaps = 2/231 (1%)
Strand=Plus/Minus
Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCT-CTTTAGAGATATTATAATC 192365
||||||||||| || | || || ||||||||||||| || |||| || || || || ||
Sbjct 499532 ATACCACCTCTTAGTCTCAAAACCAAATGTAAAGTAGACTCCTTTTGA-ATGTTGTAGTC 499474
Query 192366 AGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGG 192425
||| | |||| |||| |||||||| ||||| || || || ||||| ||||| || ||
Sbjct 499473 AGAAAGCGTTCTGCCATCCTCCAATTGCTTACCGGCGAAAATCAATCTTTGTTGGTCTGG 499414
Query 192426 TGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTC 192485
||| || ||||| || ||||| || || ||| || || ||| | || || || ||
Sbjct 499413 TGGAATACCTTCCTTGTCTTGAATCTTGGATTTGACGTTGTCTATCGTGTCAGAAGACTC 499354
Query 192486 TACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536
|| || | |||||| || ||||| |||| || || | || ||||||||
Sbjct 499353 AACCTCCAAAGTAATAGTCTTACCGGTTAGAGTCTTGACGAAGATCTGCAT 499303
Score = 104 bits (114), Expect = 5e-17
Identities = 161/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366
||||||||||| || | || || || || | || | ||| || ||| || || |||
Sbjct 499760 ATACCACCTCTTAGTCTCAAAACCAAGTGGAGCGTGGACTCCTTTTGGATGTTGTAGTCA 499701
Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426
|| | |||| |||| ||||| || ||||| || || || | ||| || || ||||||
Sbjct 499700 GAAAGCGTTCTGCCATCCTCCAACTGCTTACCGGCGAAAATCAGTCTTTGCTGGTCAGGT 499641
Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486
|| || ||||| || ||||| || || ||| || || ||| | || || || ||
Sbjct 499640 GGGATACCTTCCTTGTCTTGAATCTTGGATTTAACGTTGTCTATCGTGTCAGAAGACTCA 499581
Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536
|| || | ||| ||||| ||||| ||||| || || | || ||||||||
Sbjct 499580 ACCTCCAAAGTGATGGTCTTACCGGTTAAAGTCTTGACGAAAATCTGCAT 499531
>seq8
Length=1564113
Score = 141 bits (156), Expect = 2e-28
Identities = 170/231 (74%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGA 192368
||||||||| | | || || || || || |||| ||| || ||| || || |||||
Sbjct 561005 ACCACCTCTCAATCTCAAAACCAAGTGCAAGGTAGACTCCTTTTGGATGTTGTAGTCAGA 561064
Query 192369 TAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGG 192428
|| |||| |||| |||||||| |||||||||||||| ||||| ||||| ||||||||
Sbjct 561065 CAAAGTTCTGCCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGG 561124
Query 192429 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTAC 192488
|| || || || ||||| || || || ||||| |||| || || || || ||
Sbjct 561125 GATACCCTCCTTGTCTTGGATCTTGGACTTGACATTGTCGATAGTGTCAGAAGACTCGAC 561184
Query 192489 TTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTTT 192539
||| || ||||| || ||||| ||||| || |||| ||| || ||||| ||
Sbjct 561185 TTCAAGGGTAATTGTCTTACCGGTTAAGGTCTTAACAAAAATTTGCATCTT 561235
>seq6
Length=1504611
Score = 141 bits (156), Expect = 2e-28
Identities = 171/230 (74%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 192299 GTTTAATAATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTC-TTTAGAGATA 192357
||| ||| ||||||||||| | | || || || || || |||| || ||| || ||
Sbjct 86310 GTTCAATGATACCACCTCTCAATCTCAAAACCAAGTGCAAGGTAGATTCCTTTTGA-ATG 86252
Query 192358 TTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGT 192417
|| || ||||| || |||| |||| |||||||| |||||||||||||| ||||| |||
Sbjct 86251 TTGTAGTCAGACAAGGTTCTGCCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGT 86192
Query 192418 TGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCT 192477
|| ||||| || || ||||| || ||||| || ||| || || || || | |||
Sbjct 86191 TGGTCAGGAGGAATACCTTCCTTGTCTTGAATCTTAGACTTGACGTTGTCAATGGTGTCT 86132
Query 192478 GACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAA 192527
|| ||||| ||||| | ||||||||| |||||||| || || || | |||
Sbjct 86131 GAAGATTCGACTTCCAAAGTAATGGTCTTACCAGTCAAGGTCTTCACAAA 86082
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 984479899090800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |