Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lachancea_20fermentati_20[genbank_20GCA_5F900074765.1_202016-10-26] 8 sequences; 10,264,457 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq7 163 8e-35 seq2 163 8e-35 seq1 105 2e-17 seq6 104 7e-17 >seq7 Length=1626734 Score = 163 bits (180), Expect = 8e-35 Identities = 530/804 (66%), Gaps = 27/804 (3%) Strand=Plus/Plus Query 155583 AGACCAATAGACGCCAGATTACATACCGCAGTCTCCTTGTCGTC-GCTGTATTCTACAAT 155641 ||| ||| || || ||||| || || || |||| | | || |||||||| ||||| Sbjct 861724 AGAGCAACTGATGCAAGATTGCACACAGCTATCTCATC-TGGTGAGCTGTATTGAACAAT 861782 Query 155642 CTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTTAGATTTACTGTT 155701 ||| ||||| ||||| || ||| || || || | || || || || ||||| | || Sbjct 861783 CTCGCAGCAGAGGTTGGATGACTTAATAGTACCGAGGTTTTTTTGATTTGATTTTTTATT 861842 Query 155702 ACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGCGTCCAGAATCTT 155761 || | |||||| ||||| ||| | || || ||||| | || | | ||| | Sbjct 861843 GCAGGAATCCTTATATAGCATGAAAGGACCGCCGGTCTCAACTTGACTTTGTAAAATTTC 861902 Query 155762 TAGCCAGAGGTCACGGGCATTAATTTGCTTGTT--GTATCTGCCTTCCGACTCATAT--T 155817 ||| || || | || |||| | |||| ||||| | || |||||| | Sbjct 861903 GCTCCAAAGCTCCTGCGCCTTAACTGTCTTGACCGGTATCAACTTTTG--CTCATAAGAT 861960 Query 155818 TCATATACAGCGTTCGGTAATCCTCACCGTAACAATCACTCAGTCCAGGGCACTTATCGG 155877 ||||||| | | |||| | || |||||||| ||||| | ||||| | || | Sbjct 861961 TCATATA-ATCTTTCGA-ACTCTTCACCGTAGCAATCTTGTAAACCAGGTGCTTCGTCCG 862018 Query 155878 GGCAAAACAGCGACCAAATTTTATTACCGATTACACGCTCCATAAATACATCACTCGCCC 155937 || |||| || ||| || |||| || |||| |||||||| ||| || Sbjct 862019 GGGAAAAAAGACTCCAGTCTTCATTATTCTCAACGCGCTTCATAAATAAGTCAGGAATCC 862078 Query 155938 AAATAGCATAGAAAAGGTCCCTTGCCTTTGACTCCTCATCGCCGTGATTCTTCCGTAGCT 155997 | | |||||||||||| |||| ||| | | || || | || || |||||||| || | Sbjct 862079 AGAGAGCATAGAAAAGATCCCGTGCTCTCAATTCTTCTTTTCCATGGTTCTTCCGAAGTT 862138 Query 155998 CTAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCAAAACT-ACCATTC 156056 ||| || || ||| ||| ||| ||||| || || || |||||| ||| | Sbjct 862139 GTAAAAAGTCAAAAATGTCACAATGCCAAGGCTCTAGGTATAT-GCAAAAGGCACCCGGC 862197 Query 156057 CTCTTG---CCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACCTAGCATAGGA 156113 ||||| ||||| ||||| || || ||||| || || ||||| |||| |||||||||| Sbjct 862198 CTCTTATTCCCACCTTGATCAACGTAGCGAGCTGTGTTGTTGAAAACACGTAGCATAGGA 862257 Query 156114 ATAATACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATGAGCGAACATTA 156173 | | |||||| ||||||||||| | || |||| || ||| | | | ||| Sbjct 862258 ACCAGACCATTCGAAGTGCCATTTGAACCTGAAATAAACGCACCGCTTCCCCTTATATT- 862316 Query 156174 TGA-ATATGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCA--TTCCTTTACA 156230 ||| | ||| | |||| ||| || || ||| | || | | |||| || | || | Sbjct 862317 TGATACATGAATACCAACACCGCCAGAAGCTTTTG--ATATCATCGCAGTTTTATGTAGA 862374 Query 156231 GTATTGAAAATACCTTCAATAGAATCATCTTCCATTGATAGTAGATAGCACGAACTTA-- 156288 ||| | | || || ||||| ||||| ||| |||| || ||| |||| || || Sbjct 862375 GTACGGTATATCCCATCAATTGAATCCTCTAACATTCCAAGGAGAAAGCATGAGGATAAG 862434 Query 156289 -ATTGAGGTCGTGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAAATACTTA 156347 ||||| | | | ||||| |||||||||| ||||| | |||||||||||| |||| Sbjct 862435 TATTGA--TTGACG-GTTCCTGCGTTGAATAACGTAGGAGAGGCATGAATAAAAAACTTT 862491 Query 156348 TTAGACATATAATCGTATGTCTCC 156371 | ||||| | ||||| || ||| Sbjct 862492 CTGGACATCAAGTCGTAAGTTTCC 862515 >seq2 Length=1086951 Score = 163 bits (180), Expect = 8e-35 Identities = 601/925 (65%), Gaps = 21/925 (2%) Strand=Plus/Plus Query 155587 CAATAGACGCCAGATTACATACCGCAGTCTCCT-TGTCGTCGCTGTATTCTACAATCTCA 155645 ||| ||| |||| ||||| || ||||| |||| || | | ||| || || || ||| Sbjct 390198 CAACAGAAGCCAAGTTACACACGGCAGTTTCCTCTGGGGAAGA-GTACTCGACGATTTCA 390256 Query 155646 CAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTTAGATTTACTGTTACAA 155705 || |||| ||||||| ||||||||| || | ||||| |||||||| || ||||||||| Sbjct 390257 CAACACAAGTTAGAAGACTTGATGGTACCAAGGTTCTTTTGGTTAGACTTTCTGTTACAA 390316 Query 155706 GCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGCGTCCAGAATCTTTAGC 155765 | ||| ||||| | ||| |||| || || || ||| |||| || || ||||| | Sbjct 390317 GAATCTTTGTAAATCATGAATGGAGTACCGGTTTCCGTCTGAGCTTCTAGAATGGCATAC 390376 Query 155766 CAGAGGTCACGGGCATTAATTTGCTTGTTGTATCTGCCTTCCGACTCATAT--TTCATAT 155823 || || | | || || || ||| | | ||| || | | || ||||||| Sbjct 390377 CATAGCTTCTGAGCTTTGATAGTCTTTCTACCACGGCCCTCTTGCACGTAACGTTCATAT 390436 Query 155824 ACAGCGTTCGGTAATCCTCACCGTAACAATCACTCAGTCCAGGGCACTTATCG-GGGCAA 155882 | ||| |||| | || ||||| || ||| || || ||| ||| | ||| || Sbjct 390437 AAAGC-TTCGA-ATTCATCACCATAGACATCGGCAAGACC-GGGAGCTTCACTAGGGGAA 390493 Query 155883 AACAGCGACCAAATTTTA---TTACCGATTACACGCTCCATAAATACATCACTCGCCCAA 155939 |||| | ||| || | || | || | || ||| || | ||| |||| Sbjct 390494 AACAAGGTCCA---TTCACCGTTCTCTTGAACTCTCTTCATGAACAAATCTGGAACCCAT 390550 Query 155940 ATAGCATAGAAAAGGTCCCTTGCCTTTGACTCCTCATCGCCGTGATTCTTCCGTAGCTCT 155999 | |||| ||| | || || || || || | ||||| || ||||| | || Sbjct 390551 AGAGCAGGGAACAAATCTCTGGCACGGATTTCTTCCTTACCGTGGTTTTTCCGGATGTCG 390610 Query 156000 AAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCAAAACTACCATTCCTC 156059 | || || ||||||| || ||| || | || || |||||| ||| ||| Sbjct 390611 ACAAAGTCGAAGATATCAGAGTGCCATGGTTCTAAGTAAATTGCAAAAGCACCTGGTCTC 390670 Query 156060 TTG---CCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACCTAGCATAGGAATA 156116 ||| ||||| ||||| || || |||||||| || ||| | |||| | ||| || ||| Sbjct 390671 TTGTTGCCACCTTGATCAACGTAACGAGCAGTGTTGTTGTATACACGAACCATGGGGATA 390730 Query 156117 ATACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATGAGCGAACATTATGA 156176 |||||||| ||||| || ||||| || ||| | || || | || |||| || || Sbjct 390731 ATACCATTCGAAGTACCGTTGGTACCTGCAATGTAGGAGCCTGTAGAACGAATGTTGTGG 390790 Query 156177 ATATGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCATTCCTTTACAGTATTG 156236 || || | ||| ||||| || | || || || || ||||| || | ||||| | Sbjct 390791 ATGTGCAATCCGATACCGCCCGCAGTCTTGGAGATCATGGCACATTCTTTCAAAGTATCG 390850 Query 156237 AAAATACCTTCAATAGAATCATCTTCCATTGATAGTAGATAGCACGAACTTAATTGAGGT 156296 | |||||||| || || || |||| ||| | || || | || ||| | ||||| Sbjct 390851 TAGATACCTTCGATGGAGTCCTCTTTCATGGCTACCAGGAAACAGGAAGACATCTGAGGA 390910 Query 156297 CGTGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAAATA-CTTATTAGACAT 156355 | || || || |||||||||| || || | ||| ||| | ||||| |||| |||||| Sbjct 390911 TGAGGAGTACCGGCGTTGAATAACGTGGGCGATGCGTGAGTGAAATATCTTA-GAGACAT 390969 Query 156356 ATAATCGTATGTCTC-CTTAATCTTCTCAAGATTAGACCCGTGAATACAGATAGAGACCC 156414 || ||| || || | |||| || | | ||||| |||| || | || | Sbjct 390970 GAGATTGTAGGTTTCGAGCACTCTT-TCGATGTCGCGGCCGTGGATACCGACGGCAACAC 391028 Query 156415 TCATCCACATATGCTGAGGACGCTCTACAATCACTCCATCAATTCGCAGAAGGTATGCGC 156474 ||| || |||||||||||| ||| | | ||||| || || || | ||| | | Sbjct 391029 GCATGATCAAATGCTGAGGACGTTCTGCGACTTTACCATCGATACGGAGTAAGTACGAAC 391088 Query 156475 GTTCCAGAGTTTTAAACCCGAAATA 156499 |||| || || || || || ||||| Sbjct 391089 GTTCTAGGGTCTTGAAACCAAAATA 391113 Score = 105 bits (116), Expect = 2e-17 Identities = 200/290 (69%), Gaps = 6/290 (2%) Strand=Plus/Plus Query 302590 AAACGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACA 302649 |||||||| || || || || ||| | ||||| || ||||||||||| | ||| || Sbjct 288289 AAACGACGTTGGATGTATCCGGTTTCTGCGGTTTTCACTGCTGTATCAATCAAACCCTCA 288348 Query 302650 CGACCACCCATAGCATGGAAGAATAGCTCTTCCGGTCGT-AGCCCCCCAATAAAGGAGCT 302708 || |||||||| || ||||| || | || | ||| | |||| | ||| | ||||| | Sbjct 288349 CGTCCACCCATCGCGTGGAAAAAAAATTCCTGAGGTGTTAAGCCTCTCAA-ATAGGAGTT 288407 Query 302709 CTCAACGAAACCACGCGCCTCGGGCGAATCGTCGAACTTGGTAAAGTGTGGCAGGGTCCT 302768 |||||| ||||| | || || |||| || ||||| || || || ||||| || Sbjct 288408 CTCAACAAAACCTTTGGATTCTGGAGAATAATCATCCTTGGAGAAATGAGGAAGGGTTCT 288467 Query 302769 GTTCTCATAGCCGTATGGGATACGCTTTCCATCAACGTTCTGCTGTCCCAGGCACGAAAT 302828 || || | ||| | | ||||||||| || || || ||||| |||| || | | Sbjct 288468 GTCTGCAAATCCGAAGGCGATACGCTTACCTTCTACAGATTGCTGGCCCACACAGGCAGA 288527 Query 302829 CATCTGCGAAATATT--TAAATCACTGCCCTTGGAGCCAGCATTTACCAT 302876 ||| || | |||||| ||||| | || || || || ||| ||||||| Sbjct 288528 CATTTGGGCAATATTAATAAATGA--ACCTTTCGAACCGGCACTTACCAT 288575 Score = 98.7 bits (108), Expect = 3e-15 Identities = 167/239 (70%), Gaps = 5/239 (2%) Strand=Plus/Plus Query 301731 CTTCGCCTTGTTTTGGTCGTATCTATCCTGCTCGTTTAAATAAATAGTACAGGATGGATT 301790 ||| || || | ||||||| | || | || || ||| || | || | ||||| | Sbjct 287415 CTTTGCTTTTTCTTGGTCGGCTGCATGATTCTGGTCTAAGTATACCGTCAATGATGGTGT 287474 Query 301791 CTTTGTGTTTTCCGATAGAGACAGAATTTC-TTCAATACGGGGAACACCACGGGTTACGT 301849 || |||||| | || | || ||| || ||||| ||| |||||||| || || | Sbjct 287475 TTTCATGTTTTTAGCTACATTCAAAATCTCCTTCAA-ACGTGGAACACCTGAAGTCACCT 287533 Query 301850 TAGACTTGGACGCAACACCAGCAAAGTGGAAAGTATTCAGAGTTAATTGAGTAGTTGGCT 301909 | |||||| || ||||| ||||||||||| || |||| ||| | |||||| | ||| | Sbjct 287534 T---CTTGGAGGCGACACCTGCAAAGTGGAAGGTGTTCAAAGTCATTTGAGTGGCTGGTT 287590 Query 301910 CACCAATACTTTGTGCCGCAATCATACCAACCATTTCTCCTGGTGCTACAATAGACTTC 301968 | || ||| ||| || || | | |||||||||||| ||||| |||||| ||| || Sbjct 287591 CTCCGATAGATTGAGCAGCTAGAACACCAACCATTTCACCTGGGTGTACAATGGACCTC 287649 >seq1 Length=762788 Score = 105 bits (116), Expect = 2e-17 Identities = 249/368 (68%), Gaps = 6/368 (2%) Strand=Plus/Minus Query 133292 GAAGTTCAACTGGCCGAAGCCC-GTGCCTTTTATGGGCTACAGATTGCGATGGAAAATAT 133350 ||||||||| | | |||||| |||| ||||| ||| | ||||| ||||||||| || Sbjct 619583 GAAGTTCAAATCCCAGAAGCCAAGTGC-TTTTACGGGTTCCAGATCATGATGGAAAACAT 619525 Query 133351 CCATTCTATCACATATTCTACTCTAATTGATACTTACATCAAAGATACCGTCCAGAAGCA 133410 ||| || || || ||| || ||||| || ||||||||||| || ||| | Sbjct 619524 CCACTCCGAGACCTACTCTCTGCTGATTGACACCTACATCAAAGACCCCAAGGAGAGCGA 619465 Query 133411 CAAACTATTCAACGCCATTAGCGAAT-TTCCTTGTATTAAAAAGAAATCTGACTGGGCTA 133469 |||||||| |||||| | ||| ||||| || || |||| | || ||||| | Sbjct 619464 TTTCCTATTCAATGCCATT-GAAAATATTCCTCAGATCAAGGAGAAGGCCGAATGGGCCA 619406 Query 133470 TTAAATGGATCCAGGAC-AAGCGTGCGAGTTTTGCTACTCGTCTCGTTGCTTTTGCTGTA 133528 | | ||||||||||||| ||| | || ||||| | | || || ||||||| Sbjct 619405 TCAGATGGATCCAGGACGAAGAG-GCCCTATTTGCAGAGAGATTGGTCGCCTTTGCTGCC 619347 Query 133529 GTAGAGGGCAtttttttCAGTGGTGCGTTCTGCTCTATTTTTTGGCTTAAAAAGCGTGGT 133588 || || || |||| ||| || | || | ||||||| ||||| || ||| ||| Sbjct 619346 GTGGAAGGTGTTTTCTTCTCCGGATCCTTTGCCGCTATTTTCTGGCTAAAGAAGAAAGGT 619287 Query 133589 ATTCTACCTGGACTGTGTTTTTCTAACGAACTTATTTCAAGGGACGAGGCACTTCACACC 133648 | | || || || || ||||| || || |||| || ||||||| |||||||| Sbjct 619286 TTGATGCCCGGTCTAACGTTCTCTAATGAGCTAATTTGCAGAGACGAGGGTCTTCACACT 619227 Query 133649 GAATTTGC 133656 || ||||| Sbjct 619226 GATTTTGC 619219 >seq6 Length=1504611 Score = 104 bits (114), Expect = 7e-17 Identities = 99/126 (79%), Gaps = 3/126 (2%) Strand=Plus/Plus Query 301815 AATTTCTTCAATACGGGGAACACCACGGGTTACGTTAGACTTGGACGCAACACCAGCAAA 301874 |||||||| |||||||||||||||| | || ||||| | | || |||||||||||||| Sbjct 264065 AATTTCTTTAATACGGGGAACACCAAGCGTAACGTT---CATAGAGGCAACACCAGCAAA 264121 Query 301875 GTGGAAAGTATTCAGAGTTAATTGAGTAGTTGGCTCACCAATACTTTGTGCCGCAATCAT 301934 ||| ||||| |||| ||| | ||| ||| |||||||||||| ||||| |||| Sbjct 264122 GTGAAAAGTTTTCAAAGTCATTTGTGTACCGGGCTCACCAATAGAATGTGCACCAATAGC 264181 Query 301935 ACCAAC 301940 |||||| Sbjct 264182 ACCAAC 264187 Score = 98.7 bits (108), Expect = 3e-15 Identities = 108/141 (77%), Gaps = 2/141 (1%) Strand=Plus/Minus Query 251848 GTCATACGACTGGGAATAGCATGGGGATTGATGATGATGTCGGGTTTCAGTCCATCAGCA 251907 ||||||||| |||||| || || ||||| ||||| | ||| ||| | || |||| | Sbjct 1279775 GTCATACGAGAGGGAATGGCGTGAGGATTAATGATCAGGTCCGGTACAATACCTTCAGAA 1279716 Query 251908 GTGAAGGGCATATCCTTTTCCTCAATAA-TGTTTCCAATAGTTCCCTTTTGTCCGTGACG 251966 ||||| |||||||| || || || ||| | | |||||||| ||||| || |||||||| Sbjct 1279715 GTGAAAGGCATATC-TTCTCTTCTGTAAGTAATACCAATAGTACCCTTCTGACCGTGACG 1279657 Query 251967 AGAACTGAACTTATCACCAAT 251987 |||| ||||| |||||||| Sbjct 1279656 AGAAGCAAACTTGTCACCAAT 1279636 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471817449138696