Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lachancea_20fermentati_20[genbank_20GCA_5F900074765.1_202016-10-26] 8 sequences; 10,264,457 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq4 136 4e-27 seq8 132 4e-26 seq6 127 2e-24 seq1 96.9 3e-15 >seq4 Length=1192607 Score = 136 bits (150), Expect = 4e-27 Identities = 163/219 (74%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || ||||||||||| || || || | ||||| ||| || | Sbjct 499759 ATGCAGATCTTCGTCAAGACTCTAACCGGTAAGACCATCACCTTGGAAGTCGAATCCTCT 499818 Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 || || | || |||| ||| | ||||| |||||||| ||||| || || || || || Sbjct 499819 GATACCATCGACAACGTTAAGTC-CAAGATTCAAGACAAGGAAGGTATTCCACCTGACCA 499877 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 ||| | ||||| || ||||| || || |||||||| |||| | || ||||| || Sbjct 499878 GCAAAGATTGATTTTCGCCGGTAAGCAATTGGAGGATGGCAGAACTCTTTCTGATTACAA 499937 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATT 24921 |||||||||||||| || |||||||||| ||| |||| Sbjct 499938 TATTCAAAAGGAATCTACCTTACACTTGGTTTTGAGATT 499976 Score = 132 bits (146), Expect = 4e-26 Identities = 159/216 (74%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || ||||||||||| |||||||| | || || || | | Sbjct 499303 ATGCAGATCTTCGTCAAGACTCTAACCGGTAAGACTATTACTTTGGAGGTTGAGTCTTCT 499362 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| |||| | || ||| ||||| |||||||| ||||| || || || || ||| Sbjct 499363 GACACGATAGACAACGTCAAATCCAAGATTCAAGACAAGGAAGGTATTCCACCAGACCAA 499422 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 ||| | ||||| || ||||| || || |||||||| |||| | || || || ||| Sbjct 499423 CAAAGATTGATTTTCGCCGGTAAGCAATTGGAGGATGGCAGAACGCTTTCTGACTACAAC 499482 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGA 24919 ||||||||||| || || |||| ||||| ||| || Sbjct 499483 ATTCAAAAGGAGTCTACTTTACATTTGGTTTTGAGA 499518 Score = 123 bits (136), Expect = 2e-23 Identities = 155/213 (73%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| || | || || | || ||||| |||||||| | ||||| ||| || | Sbjct 499075 ATGCAGATTTTCGTCAAGACTTTGACAGGTAAGACTATTACCTTGGAAGTCGAATCCTCT 499134 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | || | || ||| ||||| |||||||| ||||| || || || || || Sbjct 499135 GATACCATCGACAATGTCAAATCCAAGATTCAAGACAAGGAAGGTATTCCACCTGACCAG 499194 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 ||| | ||||| || ||||| || || |||||||| |||| | || ||||| || Sbjct 499195 CAAAGATTGATTTTCGCCGGTAAGCAATTGGAGGATGGCAGAACTCTTTCTGATTACAAT 499254 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTG 24916 |||||||||||||| || |||||||||| ||| Sbjct 499255 ATTCAAAAGGAATCTACCTTACACTTGGTTTTG 499287 Score = 118 bits (130), Expect = 1e-21 Identities = 154/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| || | || || ||||||| || || || || || || || ||| || | Sbjct 498619 ATGCAGATTTTCGTCAAGACTTTAACCGGCAAGACCATCACTCTGGAGGTTGAATCCTCT 498678 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | || | || ||| |||||||| || || ||||| || || || |||||| Sbjct 498679 GATACCATCGACAACGTCAAATCCAAGATCCAGGATAAGGAAGGTATTCCACCTGATCAA 498738 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 ||| | ||||| || || || || ||| |||||||| |||| | || ||||| || Sbjct 498739 CAAAGATTGATTTTCGCTGGTAAGCAGTTGGAGGATGGCAGAACTCTTTCTGATTACAAT 498798 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTG 24916 |||||||||||||| || ||||| |||| ||| Sbjct 498799 ATTCAAAAGGAATCTACCTTACACCTGGTTTTG 498831 Score = 114 bits (126), Expect = 1e-20 Identities = 157/217 (72%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || ||||||||||| || || || | ||||| ||| || | Sbjct 498847 ATGCAGATCTTCGTCAAGACTCTAACCGGTAAGACCATCACCTTGGAAGTCGAATCCTCT 498906 Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 || || | || |||| |||| | |||||||| || || ||||| || || || || || Sbjct 498907 GATACCATCGACAACGTTAAATC-CAAGATCCAGGATAAGGAAGGTATTCCACCTGACCA 498965 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 ||| | |||| || || || || ||| |||||||| |||| | || || || || Sbjct 498966 GCAAAGACTGATTTTCGCTGGTAAGCAGTTGGAGGATGGCAGAACGCTTTCTGACTACAA 499025 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGA 24919 ||| |||||||| || || |||| ||||| ||| || Sbjct 499026 CATCCAAAAGGAGTCTACTTTACATTTGGTTTTGAGA 499062 >seq8 Length=1564113 Score = 132 bits (146), Expect = 4e-26 Identities = 168/231 (73%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 |||||| || ||| |||| || |||||||||| || ||||| || ||||| || | | Sbjct 561233 GATGCAAATTTTTGTTAAGACCTTAACCGGTAAGACAATTACCCTTGAAGTCGAGTCTTC 561174 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || | || || |||||||||||||| || || || || || || || Sbjct 561173 TGACACTATCGACAATGTCAAGTCCAAGATCCAAGACAAGGAGGGTATCCCACCTGACCA 561114 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 |||| | ||||||||||| || || || |||| ||| |||| |||| || || || Sbjct 561113 ACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGCAGAACTTTGTCTGACTACAA 561054 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGCGG 24933 ||| |||||||| || || | |||||||| ||| ||||| | || || || Sbjct 561053 CATCCAAAAGGAGTCTACCTTGCACTTGGTTTTGAGATTGAGAGGTGGTGG 561003 >seq6 Length=1504611 Score = 127 bits (140), Expect = 2e-24 Identities = 150/203 (74%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 24728 ACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGTAGAAACGGTAAAACAA 24787 || ||||| || ||||| | ||||| ||| | | ||||| | || | || || Sbjct 86097 ACTGGTAAGACCATTACTTTGGAAGTCGAATCTTCAGACACCATTGACAACGTCAAGTCT 86156 Query 24788 AAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAA 24847 ||||| |||||||| ||||| || ||||| || |||||| | ||||||||||| || || Sbjct 86157 AAGATTCAAGACAAGGAAGGTATTCCTCCTGACCAACAAAGATTGATCTTTGCTGGTAAG 86216 Query 24848 CAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCGACACTACAC 24907 || |||| ||| |||| | |||| || || ||||||||||||||||| || | ||| Sbjct 86217 CAATTGGAAGATGGCAGAACCTTGTCTGACTACAACATTCAAAAGGAATCTACCTTGCAC 86276 Query 24908 TTGGTGTTGCGATTGCGCGGAGG 24930 ||||| ||| ||||| | || || Sbjct 86277 TTGGTTTTGAGATTGAGAGGTGG 86299 >seq1 Length=762788 Score = 96.9 bits (106), Expect = 3e-15 Identities = 112/151 (74%), Gaps = 0/151 (0%) Strand=Plus/Minus Query 126029 TGGTCGCTTTCGCTATAGTGGAAGGCGTGTTTTTCTCGGGTAGTTTTGCGGCTAtttttt 126088 ||||||| || ||| |||||||| || || ||||| || ||||| |||||||| | Sbjct 619363 TGGTCGCCTTTGCTGCCGTGGAAGGTGTTTTCTTCTCCGGATCCTTTGCCGCTATTTTCT 619304 Query 126089 ttATAAAGACAAAGGGTATAATGCCCGGTCTAACGTTCAGCAACGAGTTGATTTCTCGTG 126148 |||||| || ||| | |||||||||||||||||| || ||| | |||| | | Sbjct 619303 GGCTAAAGAAGAAAGGTTTGATGCCCGGTCTAACGTTCTCTAATGAGCTAATTTGCAGAG 619244 Query 126149 ACGAAGGACTCCATACGGACTTTGCATGTCT 126179 |||| || || || || || ||||||||||| Sbjct 619243 ACGAGGGTCTTCACACTGATTTTGCATGTCT 619213 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449897555010240