Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lachancea_20fermentati_20[genbank_20GCA_5F900074765.1_202016-10-26]
8 sequences; 10,264,457 total letters
Query= NC_021923.1
Length=140633
Score E
Sequences producing significant alignments: (Bits) Value
seq4 136 4e-27
seq8 132 4e-26
seq6 127 2e-24
seq1 96.9 3e-15
>seq4
Length=1192607
Score = 136 bits (150), Expect = 4e-27
Identities = 163/219 (74%), Gaps = 2/219 (1%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||||||||| | || || ||||||||||| || || || | ||||| ||| || |
Sbjct 499759 ATGCAGATCTTCGTCAAGACTCTAACCGGTAAGACCATCACCTTGGAAGTCGAATCCTCT 499818
Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
|| || | || |||| ||| | ||||| |||||||| ||||| || || || || ||
Sbjct 499819 GATACCATCGACAACGTTAAGTC-CAAGATTCAAGACAAGGAAGGTATTCCACCTGACCA 499877
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
||| | ||||| || ||||| || || |||||||| |||| | || ||||| ||
Sbjct 499878 GCAAAGATTGATTTTCGCCGGTAAGCAATTGGAGGATGGCAGAACTCTTTCTGATTACAA 499937
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATT 24921
|||||||||||||| || |||||||||| ||| ||||
Sbjct 499938 TATTCAAAAGGAATCTACCTTACACTTGGTTTTGAGATT 499976
Score = 132 bits (146), Expect = 4e-26
Identities = 159/216 (74%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||||||||| | || || ||||||||||| |||||||| | || || || | |
Sbjct 499303 ATGCAGATCTTCGTCAAGACTCTAACCGGTAAGACTATTACTTTGGAGGTTGAGTCTTCT 499362
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| |||| | || ||| ||||| |||||||| ||||| || || || || |||
Sbjct 499363 GACACGATAGACAACGTCAAATCCAAGATTCAAGACAAGGAAGGTATTCCACCAGACCAA 499422
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
||| | ||||| || ||||| || || |||||||| |||| | || || || |||
Sbjct 499423 CAAAGATTGATTTTCGCCGGTAAGCAATTGGAGGATGGCAGAACGCTTTCTGACTACAAC 499482
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGA 24919
||||||||||| || || |||| ||||| ||| ||
Sbjct 499483 ATTCAAAAGGAGTCTACTTTACATTTGGTTTTGAGA 499518
Score = 123 bits (136), Expect = 2e-23
Identities = 155/213 (73%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||| || | || || | || ||||| |||||||| | ||||| ||| || |
Sbjct 499075 ATGCAGATTTTCGTCAAGACTTTGACAGGTAAGACTATTACCTTGGAAGTCGAATCCTCT 499134
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
|| || | || | || ||| ||||| |||||||| ||||| || || || || ||
Sbjct 499135 GATACCATCGACAATGTCAAATCCAAGATTCAAGACAAGGAAGGTATTCCACCTGACCAG 499194
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
||| | ||||| || ||||| || || |||||||| |||| | || ||||| ||
Sbjct 499195 CAAAGATTGATTTTCGCCGGTAAGCAATTGGAGGATGGCAGAACTCTTTCTGATTACAAT 499254
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTG 24916
|||||||||||||| || |||||||||| |||
Sbjct 499255 ATTCAAAAGGAATCTACCTTACACTTGGTTTTG 499287
Score = 118 bits (130), Expect = 1e-21
Identities = 154/213 (72%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||| || | || || ||||||| || || || || || || || ||| || |
Sbjct 498619 ATGCAGATTTTCGTCAAGACTTTAACCGGCAAGACCATCACTCTGGAGGTTGAATCCTCT 498678
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
|| || | || | || ||| |||||||| || || ||||| || || || ||||||
Sbjct 498679 GATACCATCGACAACGTCAAATCCAAGATCCAGGATAAGGAAGGTATTCCACCTGATCAA 498738
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
||| | ||||| || || || || ||| |||||||| |||| | || ||||| ||
Sbjct 498739 CAAAGATTGATTTTCGCTGGTAAGCAGTTGGAGGATGGCAGAACTCTTTCTGATTACAAT 498798
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTG 24916
|||||||||||||| || ||||| |||| |||
Sbjct 498799 ATTCAAAAGGAATCTACCTTACACCTGGTTTTG 498831
Score = 114 bits (126), Expect = 1e-20
Identities = 157/217 (72%), Gaps = 2/217 (1%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||||||||| | || || ||||||||||| || || || | ||||| ||| || |
Sbjct 498847 ATGCAGATCTTCGTCAAGACTCTAACCGGTAAGACCATCACCTTGGAAGTCGAATCCTCT 498906
Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
|| || | || |||| |||| | |||||||| || || ||||| || || || || ||
Sbjct 498907 GATACCATCGACAACGTTAAATC-CAAGATCCAGGATAAGGAAGGTATTCCACCTGACCA 498965
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
||| | |||| || || || || ||| |||||||| |||| | || || || ||
Sbjct 498966 GCAAAGACTGATTTTCGCTGGTAAGCAGTTGGAGGATGGCAGAACGCTTTCTGACTACAA 499025
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGA 24919
||| |||||||| || || |||| ||||| ||| ||
Sbjct 499026 CATCCAAAAGGAGTCTACTTTACATTTGGTTTTGAGA 499062
>seq8
Length=1564113
Score = 132 bits (146), Expect = 4e-26
Identities = 168/231 (73%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
|||||| || ||| |||| || |||||||||| || ||||| || ||||| || | |
Sbjct 561233 GATGCAAATTTTTGTTAAGACCTTAACCGGTAAGACAATTACCCTTGAAGTCGAGTCTTC 561174
Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
||||| | || | || || |||||||||||||| || || || || || || ||
Sbjct 561173 TGACACTATCGACAATGTCAAGTCCAAGATCCAAGACAAGGAGGGTATCCCACCTGACCA 561114
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
|||| | ||||||||||| || || || |||| ||| |||| |||| || || ||
Sbjct 561113 ACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGCAGAACTTTGTCTGACTACAA 561054
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGCGG 24933
||| |||||||| || || | |||||||| ||| ||||| | || || ||
Sbjct 561053 CATCCAAAAGGAGTCTACCTTGCACTTGGTTTTGAGATTGAGAGGTGGTGG 561003
>seq6
Length=1504611
Score = 127 bits (140), Expect = 2e-24
Identities = 150/203 (74%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 24728 ACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGTAGAAACGGTAAAACAA 24787
|| ||||| || ||||| | ||||| ||| | | ||||| | || | || ||
Sbjct 86097 ACTGGTAAGACCATTACTTTGGAAGTCGAATCTTCAGACACCATTGACAACGTCAAGTCT 86156
Query 24788 AAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAA 24847
||||| |||||||| ||||| || ||||| || |||||| | ||||||||||| || ||
Sbjct 86157 AAGATTCAAGACAAGGAAGGTATTCCTCCTGACCAACAAAGATTGATCTTTGCTGGTAAG 86216
Query 24848 CAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCGACACTACAC 24907
|| |||| ||| |||| | |||| || || ||||||||||||||||| || | |||
Sbjct 86217 CAATTGGAAGATGGCAGAACCTTGTCTGACTACAACATTCAAAAGGAATCTACCTTGCAC 86276
Query 24908 TTGGTGTTGCGATTGCGCGGAGG 24930
||||| ||| ||||| | || ||
Sbjct 86277 TTGGTTTTGAGATTGAGAGGTGG 86299
>seq1
Length=762788
Score = 96.9 bits (106), Expect = 3e-15
Identities = 112/151 (74%), Gaps = 0/151 (0%)
Strand=Plus/Minus
Query 126029 TGGTCGCTTTCGCTATAGTGGAAGGCGTGTTTTTCTCGGGTAGTTTTGCGGCTAtttttt 126088
||||||| || ||| |||||||| || || ||||| || ||||| |||||||| |
Sbjct 619363 TGGTCGCCTTTGCTGCCGTGGAAGGTGTTTTCTTCTCCGGATCCTTTGCCGCTATTTTCT 619304
Query 126089 ttATAAAGACAAAGGGTATAATGCCCGGTCTAACGTTCAGCAACGAGTTGATTTCTCGTG 126148
|||||| || ||| | |||||||||||||||||| || ||| | |||| | |
Sbjct 619303 GGCTAAAGAAGAAAGGTTTGATGCCCGGTCTAACGTTCTCTAATGAGCTAATTTGCAGAG 619244
Query 126149 ACGAAGGACTCCATACGGACTTTGCATGTCT 126179
|||| || || || || || |||||||||||
Sbjct 619243 ACGAGGGTCTTCACACTGATTTTGCATGTCT 619213
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 449897555010240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |