Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lachancea_20fermentati_20[genbank_20GCA_5F900074765.1_202016-10-26] 8 sequences; 10,264,457 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq4 123 2e-23 seq6 100 2e-16 >seq4 Length=1192607 Score = 123 bits (136), Expect = 2e-23 Identities = 175/245 (71%), Gaps = 1/245 (0%) Strand=Plus/Plus Query 110255 ATTTATAAGAGATTTAAAATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACC 110314 ||||||| || | |||||||| || || ||||| |||||||||||||| ||||| || Sbjct 498602 ATTTATAC-AGCTGAAAAATGCAGATTTTCGTCAAGACTTTAACCGGCAAGACCATCACT 498660 Query 110315 GTCGAAACGGAGCCTGACGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAA 110374 | || || | ||||| ||| | | || ||| ||||| || || ||| Sbjct 498661 CTGGAGGTTGAATCCTCTGATACCATCGACAACGTCAAATCCAAGATCCAGGATAAGGAA 498720 Query 110375 GGCGTGCCCGTGGATCAACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGA 110434 || | || |||||||||||| | |||| || ||||| ||| ||||||||| |||| Sbjct 498721 GGTATTCCACCTGATCAACAAAGATTGATTTTCGCTGGTAAGCAGTTGGAGGATGGCAGA 498780 Query 110435 ACAATGGCGGATTACAACATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGA 110494 || | | |||||||| |||||||| |||||||| || ||| |||| || || || || Sbjct 498781 ACTCTTTCTGATTACAATATTCAAAAGGAATCTACCTTACACCTGGTTTTGAGGCTAAGA 498840 Query 110495 GGGGG 110499 || || Sbjct 498841 GGTGG 498845 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 ||||| || || ||||| ||||||||||| || ||||| || | || ||| || Sbjct 499531 ATGCAGATTTTCGTCAAGACTTTAACCGGTAAGACCATCACTTTGGAGGTTGAGTCTTCT 499590 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 || || | | | | || ||| |||||| ||||| ||||| | || || || Sbjct 499591 GACACGATAGACAACGTTAAATCCAAGATTCAAGACAAGGAAGGTATCCCACCTGACCAG 499650 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 |||||||| |||| || ||||| ||| ||||||||| |||||| | | || |||||| Sbjct 499651 CAAAGACTGATTTTCGCCGGTAAGCAGTTGGAGGATGGCAGAACGCTTTCTGACTACAAC 499710 Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499 || ||||| || || ||| | ||| |||| || ||||| |||| || Sbjct 499711 ATCCAAAAGGAGTCCACGCTCCACTTGGTTTTGAGACTAAGAGGTGG 499757 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 ||||| || || ||||| ||| ||||||| || || ||||| | || ||| || Sbjct 499303 ATGCAGATCTTCGTCAAGACTCTAACCGGTAAGACTATTACTTTGGAGGTTGAGTCTTCT 499362 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 || || | | | | || ||| |||||| ||||| ||||| | || || ||| Sbjct 499363 GACACGATAGACAACGTCAAATCCAAGATTCAAGACAAGGAAGGTATTCCACCAGACCAA 499422 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 |||||| | |||| || ||||| || ||||||||| |||||| | | || |||||| Sbjct 499423 CAAAGATTGATTTTCGCCGGTAAGCAATTGGAGGATGGCAGAACGCTTTCTGACTACAAC 499482 Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499 |||||||| || ||||| || || |||| || ||||| |||| || Sbjct 499483 ATTCAAAAGGAGTCTACTTTACATTTGGTTTTGAGACTAAGAGGTGG 499529 >seq6 Length=1504611 Score = 100 bits (110), Expect = 2e-16 Identities = 108/143 (76%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 110357 AAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAACAAAGACTTATTTATGCGGGTAAA 110416 |||||| ||||| ||||| | || || ||||||||| | || | ||| ||||| Sbjct 86157 AAGATTCAAGACAAGGAAGGTATTCCTCCTGACCAACAAAGATTGATCTTTGCTGGTAAG 86216 Query 110417 CAGCTGGAGGATGCCAGAACAATGGCGGATTACAACATTCAAAAAGAATCTACGTTGCAC 110476 || |||| |||| |||||| || | || |||||||||||||| |||||||| |||||| Sbjct 86217 CAATTGGAAGATGGCAGAACCTTGTCTGACTACAACATTCAAAAGGAATCTACCTTGCAC 86276 Query 110477 ATGGTGTTAAGACTGCGAGGGGG 110499 |||| || ||| || |||| || Sbjct 86277 TTGGTTTTGAGATTGAGAGGTGG 86299 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412841559747944