Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lachancea_20fermentati_20[genbank_20GCA_5F900074765.1_202016-10-26]
8 sequences; 10,264,457 total letters
Query= NC_022646.1
Length=101818
Score E
Sequences producing significant alignments: (Bits) Value
seq4 107 1e-18
seq8 100 2e-16
>seq4
Length=1192607
Score = 107 bits (118), Expect = 1e-18
Identities = 139/192 (72%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845
|||||| |||||||| ||||| || || | | |||| |||| |||||| ||||||||
Sbjct 499494 CTCCTTTTGAATGTTGTAGTCAGAAAGCGTTCTGCCATCCTCCAATTGCTTACCGGCGAA 499435
Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905
|||| || ||| |||||| | || | || |||||||| | || || |||||||
Sbjct 499434 AATCAATCTTTGTTGGTCTGGTGGAATACCTTCCTTGTCTTGAATCTTGGATTTGACGTT 499375
Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965
|||||| ||| | ||| || || | || || ||||| || || || ||||| ||
Sbjct 499374 GTCTATCGTGTCAGAAGACTCAACCTCCAAAGTAATAGTCTTACCGGTTAGAGTCTTGAC 499315
Query 34966 AAAGATCTGCAT 34977
|||||||||||
Sbjct 499314 GAAGATCTGCAT 499303
Score = 102 bits (112), Expect = 5e-17
Identities = 161/231 (70%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 34747 ATTTCCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTC 34806
||| || || || || |||| |||| ||| | ||| ||||| ||||| || || ||
Sbjct 499989 ATTACCACCTCTTAATCTCAAAACCAAGTGTAAGGTAGATTCCTTTTGAATATTGTAATC 499930
Query 34807 CGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTG 34866
|| || | | |||| |||| |||||| |||||||| |||| || ||||||||| |
Sbjct 499929 AGAAAGAGTTCTGCCATCCTCCAATTGCTTACCGGCGAAAATCAATCTTTGCTGGTCAGG 499870
Query 34867 CGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTC 34926
|| | || |||||||| | || || || ||| | || | ||| || ||
Sbjct 499869 TGGAATACCTTCCTTGTCTTGAATCTTGGACTTAACGTTGTCGATGGTATCAGAGGATTC 499810
Query 34927 GACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
||| || | ||| |||||||| || || || ||||| || |||||||||||
Sbjct 499809 GACTTCCAAGGTGATGGTCTTACCGGTTAGAGTCTTGACGAAGATCTGCAT 499759
Score = 95.1 bits (104), Expect = 8e-15
Identities = 136/192 (71%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845
|||||| || ||||| ||||| || || | | |||| |||| ||||| || |||||
Sbjct 499038 CTCCTTTTGGATGTTGTAGTCAGAAAGCGTTCTGCCATCCTCCAACTGCTTACCAGCGAA 498979
Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905
||||||| ||||||||| | || | || ||||| || | || || ||| |||
Sbjct 498978 AATCAGTCTTTGCTGGTCAGGTGGAATACCTTCCTTATCCTGGATCTTGGATTTAACGTT 498919
Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965
| || | ||| || ||||| || | ||| |||||||| || || || ||||| ||
Sbjct 498918 GTCGATGGTATCAGAGGATTCGACTTCCAAGGTGATGGTCTTACCGGTTAGAGTCTTGAC 498859
Query 34966 AAAGATCTGCAT 34977
|||||||||||
Sbjct 498858 GAAGATCTGCAT 498847
>seq8
Length=1564113
Score = 100 bits (110), Expect = 2e-16
Identities = 162/231 (70%), Gaps = 8/231 (3%)
Strand=Plus/Plus
Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810
|| || ||||| |||| |||| ||| | ||| |||||| || ||||| ||||| ||
Sbjct 561006 CCACCTCTCAATCTCAAAACCAAGTGCAAGGTAGACTCCTTTTGGATGTTGTAGTCAGAC 561065
Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870
| | | |||| |||| |||||| || || ||||||| || ||| ||||| | ||
Sbjct 561066 AAAGTTCTGCCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGG 561125
Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTC 34926
| ||||||||||| | || || ||||| || | ||||| ||| | |||
Sbjct 561126 ATACCCTCCTTGTCTTGGATCTTGGACTTGAC--AT--TGTCGATAGTGTCAGAAGACTC 561181
Query 34927 GACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
||| |||| ||| || ||||| || || | |||||| ||||| || |||||
Sbjct 561182 GACTTCAAGGGTAATTGTCTTACCGGTTAAGGTCTTAACAAAAATTTGCAT 561232
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 325692768244952
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |