Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lachancea_20fermentati_20[genbank_20GCA_5F900074765.1_202016-10-26] 8 sequences; 10,264,457 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq4 107 1e-18 seq8 100 2e-16 >seq4 Length=1192607 Score = 107 bits (118), Expect = 1e-18 Identities = 139/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 |||||| |||||||| ||||| || || | | |||| |||| |||||| |||||||| Sbjct 499494 CTCCTTTTGAATGTTGTAGTCAGAAAGCGTTCTGCCATCCTCCAATTGCTTACCGGCGAA 499435 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905 |||| || ||| |||||| | || | || |||||||| | || || ||||||| Sbjct 499434 AATCAATCTTTGTTGGTCTGGTGGAATACCTTCCTTGTCTTGAATCTTGGATTTGACGTT 499375 Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965 |||||| ||| | ||| || || | || || ||||| || || || ||||| || Sbjct 499374 GTCTATCGTGTCAGAAGACTCAACCTCCAAAGTAATAGTCTTACCGGTTAGAGTCTTGAC 499315 Query 34966 AAAGATCTGCAT 34977 ||||||||||| Sbjct 499314 GAAGATCTGCAT 499303 Score = 102 bits (112), Expect = 5e-17 Identities = 161/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 34747 ATTTCCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTC 34806 ||| || || || || |||| |||| ||| | ||| ||||| ||||| || || || Sbjct 499989 ATTACCACCTCTTAATCTCAAAACCAAGTGTAAGGTAGATTCCTTTTGAATATTGTAATC 499930 Query 34807 CGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTG 34866 || || | | |||| |||| |||||| |||||||| |||| || ||||||||| | Sbjct 499929 AGAAAGAGTTCTGCCATCCTCCAATTGCTTACCGGCGAAAATCAATCTTTGCTGGTCAGG 499870 Query 34867 CGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTC 34926 || | || |||||||| | || || || ||| | || | ||| || || Sbjct 499869 TGGAATACCTTCCTTGTCTTGAATCTTGGACTTAACGTTGTCGATGGTATCAGAGGATTC 499810 Query 34927 GACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 ||| || | ||| |||||||| || || || ||||| || ||||||||||| Sbjct 499809 GACTTCCAAGGTGATGGTCTTACCGGTTAGAGTCTTGACGAAGATCTGCAT 499759 Score = 95.1 bits (104), Expect = 8e-15 Identities = 136/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 |||||| || ||||| ||||| || || | | |||| |||| ||||| || ||||| Sbjct 499038 CTCCTTTTGGATGTTGTAGTCAGAAAGCGTTCTGCCATCCTCCAACTGCTTACCAGCGAA 498979 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905 ||||||| ||||||||| | || | || ||||| || | || || ||| ||| Sbjct 498978 AATCAGTCTTTGCTGGTCAGGTGGAATACCTTCCTTATCCTGGATCTTGGATTTAACGTT 498919 Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965 | || | ||| || ||||| || | ||| |||||||| || || || ||||| || Sbjct 498918 GTCGATGGTATCAGAGGATTCGACTTCCAAGGTGATGGTCTTACCGGTTAGAGTCTTGAC 498859 Query 34966 AAAGATCTGCAT 34977 ||||||||||| Sbjct 498858 GAAGATCTGCAT 498847 >seq8 Length=1564113 Score = 100 bits (110), Expect = 2e-16 Identities = 162/231 (70%), Gaps = 8/231 (3%) Strand=Plus/Plus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 || || ||||| |||| |||| ||| | ||| |||||| || ||||| ||||| || Sbjct 561006 CCACCTCTCAATCTCAAAACCAAGTGCAAGGTAGACTCCTTTTGGATGTTGTAGTCAGAC 561065 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 | | | |||| |||| |||||| || || ||||||| || ||| ||||| | || Sbjct 561066 AAAGTTCTGCCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGG 561125 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTC 34926 | ||||||||||| | || || ||||| || | ||||| ||| | ||| Sbjct 561126 ATACCCTCCTTGTCTTGGATCTTGGACTTGAC--AT--TGTCGATAGTGTCAGAAGACTC 561181 Query 34927 GACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 ||| |||| ||| || ||||| || || | |||||| ||||| || ||||| Sbjct 561182 GACTTCAAGGGTAATTGTCTTACCGGTTAAGGTCTTAACAAAAATTTGCAT 561232 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325692768244952