Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lachancea_20fermentati_20[genbank_20GCA_5F900074765.1_202016-10-26] 8 sequences; 10,264,457 total letters Query= NC_023177.1 Length=124688 Score E Sequences producing significant alignments: (Bits) Value seq8 118 8e-22 seq4 107 2e-18 seq6 93.3 3e-14 >seq8 Length=1564113 Score = 118 bits (130), Expect = 8e-22 Identities = 164/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 107553 AAAATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCT 107612 || |||||||||||||| || || ||||| || || || |||||| | ||| ||| || Sbjct 561235 AAGATGCAAATTTTTGTTAAGACCTTAACCGGTAAGACAATTACCCTTGAAGTCGAGTCT 561176 Query 107613 GGCGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGAT 107672 || ||| ||| | | || || ||||| || || || || | || || Sbjct 561175 TCTGACACTATCGACAATGTCAAGTCCAAGATCCAAGACAAGGAGGGTATCCCACCTGAC 561116 Query 107673 CAGCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTAC 107732 || || ||| | || | ||| ||||| || |||| || | || ||| || | |||||| Sbjct 561115 CAACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGCAGAACTTTGTCTGACTAC 561056 Query 107733 AACATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782 ||||| |||||||||||||| |||||| |||| ||||||||| |||| || Sbjct 561055 AACATCCAAAAGGAGTCTACCTTGCACTTGGTTTTGAGATTGAGAGGTGG 561006 >seq4 Length=1192607 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 ||||| || || ||||| ||| |||| || || ||||| ||| | ||| || | Sbjct 498847 ATGCAGATCTTCGTCAAGACTCTAACCGGTAAGACCATCACCTTGGAAGTCGAATCCTCT 498906 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 ||||| ||| | | || ||| ||||| ||||| ||||| | || || ||| Sbjct 498907 GATACCATCGACAACGTTAAATCCAAGATCCAGGATAAGGAAGGTATTCCACCTGACCAG 498966 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 || ||||| |||| || ||||| ||| ||||||| | || ||| | | ||||||||| Sbjct 498967 CAAAGACTGATTTTCGCTGGTAAGCAGTTGGAGGATGGCAGAACGCTTTCTGACTACAAC 499026 Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782 || |||||||||||||| || || |||| |||||| | |||| || Sbjct 499027 ATCCAAAAGGAGTCTACTTTACATTTGGTTTTGAGACTAAGAGGTGG 499073 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 ||||| ||||| ||||| |||||||| || || ||||| || | || ||| || Sbjct 499531 ATGCAGATTTTCGTCAAGACTTTAACCGGTAAGACCATCACTTTGGAGGTTGAGTCTTCT 499590 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 || || | | | | || ||| |||||| || || ||||| | || || ||| Sbjct 499591 GACACGATAGACAACGTTAAATCCAAGATTCAAGACAAGGAAGGTATCCCACCTGACCAG 499650 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 || ||||| |||| || ||||| ||| ||||||| | || ||| | | ||||||||| Sbjct 499651 CAAAGACTGATTTTCGCCGGTAAGCAGTTGGAGGATGGCAGAACGCTTTCTGACTACAAC 499710 Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782 || ||||||||||| ||| | ||| |||| |||||| | |||| || Sbjct 499711 ATCCAAAAGGAGTCCACGCTCCACTTGGTTTTGAGACTAAGAGGTGG 499757 Score = 105 bits (116), Expect = 5e-18 Identities = 164/233 (70%), Gaps = 1/233 (0%) Strand=Plus/Plus Query 107538 ATTTATAAGAGGTTTAAAATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACC 107597 ||||||| || | |||||||| ||||| ||||| |||||||| ||||| ||||| || Sbjct 498602 ATTTATAC-AGCTGAAAAATGCAGATTTTCGTCAAGACTTTAACCGGCAAGACCATCACT 498660 Query 107598 GTCGAAACGGAGGCTGGCGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAA 107657 | || || | ||||| ||| | | || ||| ||||| ||||| ||| Sbjct 498661 CTGGAGGTTGAATCCTCTGATACCATCGACAACGTCAAATCCAAGATCCAGGATAAGGAA 498720 Query 107658 GGCGTGCCCGTGGATCAGCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAA 107717 || | || ||||| || ||| | |||| || ||||| ||| ||||||| | || | Sbjct 498721 GGTATTCCACCTGATCAACAAAGATTGATTTTCGCTGGTAAGCAGTTGGAGGATGGCAGA 498780 Query 107718 ACAATGGCGGACTACAACATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAG 107770 || | | || ||||| ||||||||||| ||||| || ||| |||| ||||| Sbjct 498781 ACTCTTTCTGATTACAATATTCAAAAGGAATCTACCTTACACCTGGTTTTGAG 498833 Score = 100 bits (110), Expect = 2e-16 Identities = 151/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 ||||| ||||| ||||| ||||| ||||| || || |||||| | ||| || | Sbjct 499075 ATGCAGATTTTCGTCAAGACTTTGACAGGTAAGACTATTACCTTGGAAGTCGAATCCTCT 499134 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 ||||| ||| | | || ||| |||||| || || ||||| | || || ||| Sbjct 499135 GATACCATCGACAATGTCAAATCCAAGATTCAAGACAAGGAAGGTATTCCACCTGACCAG 499194 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 || ||| | |||| || ||||| || ||||||| | || ||| | | || ||||| Sbjct 499195 CAAAGATTGATTTTCGCCGGTAAGCAATTGGAGGATGGCAGAACTCTTTCTGATTACAAT 499254 Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAG 107770 ||||||||||| ||||| || ||| |||| ||||| Sbjct 499255 ATTCAAAAGGAATCTACCTTACACTTGGTTTTGAG 499289 Score = 96.9 bits (106), Expect = 3e-15 Identities = 160/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 ||||| || || ||||| ||| |||| || || ||||| ||| | ||| || | Sbjct 499759 ATGCAGATCTTCGTCAAGACTCTAACCGGTAAGACCATCACCTTGGAAGTCGAATCCTCT 499818 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 ||||| ||| | | || || |||||| || || ||||| | || || ||| Sbjct 499819 GATACCATCGACAACGTTAAGTCCAAGATTCAAGACAAGGAAGGTATTCCACCTGACCAG 499878 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 || ||| | |||| || ||||| || ||||||| | || ||| | | || ||||| Sbjct 499879 CAAAGATTGATTTTCGCCGGTAAGCAATTGGAGGATGGCAGAACTCTTTCTGATTACAAT 499938 Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGGAAAT 107786 ||||||||||| ||||| || ||| |||| |||||||| |||| || ||| Sbjct 499939 ATTCAAAAGGAATCTACCTTACACTTGGTTTTGAGATTAAGAGGTGGTAAT 499989 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 ||||| || || ||||| ||| |||| || || || ||||| | || ||| || Sbjct 499303 ATGCAGATCTTCGTCAAGACTCTAACCGGTAAGACTATTACTTTGGAGGTTGAGTCTTCT 499362 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 || || | | | | || ||| |||||| || || ||||| | || || || Sbjct 499363 GACACGATAGACAACGTCAAATCCAAGATTCAAGACAAGGAAGGTATTCCACCAGACCAA 499422 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 || ||| | |||| || ||||| || ||||||| | || ||| | | ||||||||| Sbjct 499423 CAAAGATTGATTTTCGCCGGTAAGCAATTGGAGGATGGCAGAACGCTTTCTGACTACAAC 499482 Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782 ||||||||||||||||| || || |||| |||||| | |||| || Sbjct 499483 ATTCAAAAGGAGTCTACTTTACATTTGGTTTTGAGACTAAGAGGTGG 499529 >seq6 Length=1504611 Score = 93.3 bits (102), Expect = 3e-14 Identities = 152/219 (69%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 107564 TTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGCGATACTGT 107623 |||||| || || || || || || |||||||| | ||| || || || || | Sbjct 86081 TTTTGTGAAGACCTTGACTGGTAAGACCATTACTTTGGAAGTCGAATCTTCAGACACCAT 86140 Query 107624 CGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAGCAGAGACT 107683 | | | || || |||||| || || ||||| | || || || || ||| | Sbjct 86141 TGACAACGTCAAGTCTAAGATTCAAGACAAGGAAGGTATTCCTCCTGACCAACAAAGATT 86200 Query 107684 TATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAACATTCAAAA 107743 || | ||| ||||| || |||| || | || ||| || | ||||||||||||||||| Sbjct 86201 GATCTTTGCTGGTAAGCAATTGGAAGATGGCAGAACCTTGTCTGACTACAACATTCAAAA 86260 Query 107744 GGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782 ||| ||||| |||||| |||| ||||||||| |||| || Sbjct 86261 GGAATCTACCTTGCACTTGGTTTTGAGATTGAGAGGTGG 86299 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398876761109512