Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lachancea_20fermentati_20[genbank_20GCA_5F900074765.1_202016-10-26] 8 sequences; 10,264,457 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq1 105 6e-18 seq4 86.0 6e-12 >seq1 Length=762788 Score = 105 bits (116), Expect = 6e-18 Identities = 151/210 (72%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 120640 AGGCACGCAAAGTCCGTGTGCAGGCCCTCGTCGCGCGATATCAGCTCGTTGCTAAACGTC 120699 || || ||||| || ||||| || |||||||| | | || ||||| || ||||| Sbjct 619213 AGACATGCAAAATCAGTGTGAAGACCCTCGTCTCTGCAAATTAGCTCATTAGAGAACGTT 619272 Query 120700 AGGCCGGGCATGATGCCTTTCGTCTTGATGTAGAATATGGCGGCAAAGCTGCCCGAAAAG 120759 || |||||||| | |||||| |||| | |||| || ||||||||| || || ||| Sbjct 619273 AGACCGGGCATCAAACCTTTCTTCTTTAGCCAGAAAATAGCGGCAAAGGATCCGGAGAAG 619332 Query 120760 AACACGCCCTCCACGATGGCAAAGGCGACCATGCGCTCGGCCAACGTCGCCGTCTT-GCT 120818 || || || |||||| ||||||||||||| | ||| || || ||| |||| | Sbjct 619333 AAAACACCTTCCACGGCAGCAAAGGCGACCAATCTCTCTGCAAATAGGGCC-TCTTCGTC 619391 Query 120819 GTCGATCCACTTCATGGCCCACTCGGCCTT 120848 | |||||| | |||||||| |||||||| Sbjct 619392 CTGGATCCATCTGATGGCCCATTCGGCCTT 619421 >seq4 Length=1192607 Score = 86.0 bits (94), Expect = 6e-12 Identities = 112/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 133506 TCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTG 133565 ||||| | |||||| || ||| |||| || | |||||||| || ||||| ||||||||| Sbjct 499685 TCCTCCAACTGCTTACCGGCGAAAATCAGTCTTTGCTGGTCAGGTGGGATACCTTCCTTG 499626 Query 133566 TCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACG 133625 || ||||| || | | || | |||||| | | ||| || || | |||| | Sbjct 499625 TCTTGAATCTTGGATTTAACGTTGTCTATCGTGTCAGAAGACTCAACCTCCAAAGTGATG 499566 Query 133626 GTTTTGCCGGTCAGAGTTTTTACGAAAATCTGCAT 133660 || || ||||| | ||| || |||||||||||||| Sbjct 499565 GTCTTACCGGTTAAAGTCTTGACGAAAATCTGCAT 499531 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483420751657920