Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lachancea_20fermentati_20[genbank_20GCA_5F900074765.1_202016-10-26]
8 sequences; 10,264,457 total letters
Query= NC_024625.1
Length=151109
Score E
Sequences producing significant alignments: (Bits) Value
seq1 105 6e-18
seq4 86.0 6e-12
>seq1
Length=762788
Score = 105 bits (116), Expect = 6e-18
Identities = 151/210 (72%), Gaps = 2/210 (1%)
Strand=Plus/Plus
Query 120640 AGGCACGCAAAGTCCGTGTGCAGGCCCTCGTCGCGCGATATCAGCTCGTTGCTAAACGTC 120699
|| || ||||| || ||||| || |||||||| | | || ||||| || |||||
Sbjct 619213 AGACATGCAAAATCAGTGTGAAGACCCTCGTCTCTGCAAATTAGCTCATTAGAGAACGTT 619272
Query 120700 AGGCCGGGCATGATGCCTTTCGTCTTGATGTAGAATATGGCGGCAAAGCTGCCCGAAAAG 120759
|| |||||||| | |||||| |||| | |||| || ||||||||| || || |||
Sbjct 619273 AGACCGGGCATCAAACCTTTCTTCTTTAGCCAGAAAATAGCGGCAAAGGATCCGGAGAAG 619332
Query 120760 AACACGCCCTCCACGATGGCAAAGGCGACCATGCGCTCGGCCAACGTCGCCGTCTT-GCT 120818
|| || || |||||| ||||||||||||| | ||| || || ||| |||| |
Sbjct 619333 AAAACACCTTCCACGGCAGCAAAGGCGACCAATCTCTCTGCAAATAGGGCC-TCTTCGTC 619391
Query 120819 GTCGATCCACTTCATGGCCCACTCGGCCTT 120848
| |||||| | |||||||| ||||||||
Sbjct 619392 CTGGATCCATCTGATGGCCCATTCGGCCTT 619421
>seq4
Length=1192607
Score = 86.0 bits (94), Expect = 6e-12
Identities = 112/155 (72%), Gaps = 0/155 (0%)
Strand=Plus/Minus
Query 133506 TCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTG 133565
||||| | |||||| || ||| |||| || | |||||||| || ||||| |||||||||
Sbjct 499685 TCCTCCAACTGCTTACCGGCGAAAATCAGTCTTTGCTGGTCAGGTGGGATACCTTCCTTG 499626
Query 133566 TCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACG 133625
|| ||||| || | | || | |||||| | | ||| || || | |||| |
Sbjct 499625 TCTTGAATCTTGGATTTAACGTTGTCTATCGTGTCAGAAGACTCAACCTCCAAAGTGATG 499566
Query 133626 GTTTTGCCGGTCAGAGTTTTTACGAAAATCTGCAT 133660
|| || ||||| | ||| || ||||||||||||||
Sbjct 499565 GTCTTACCGGTTAAAGTCTTGACGAAAATCTGCAT 499531
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 483420751657920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |