Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lachancea_20fermentati_20[genbank_20GCA_5F900074765.1_202016-10-26]
8 sequences; 10,264,457 total letters
Query= NC_024697.1
Length=370920
Score E
Sequences producing significant alignments: (Bits) Value
seq7 145 2e-29
seq2 98.7 2e-15
seq5 96.9 8e-15
seq6 86.0 1e-11
>seq7
Length=1626734
Score = 145 bits (160), Expect = 2e-29
Identities = 297/436 (68%), Gaps = 9/436 (2%)
Strand=Plus/Minus
Query 110465 TATTCATGCTACTCCTACCCTATTTAACGCAGGAAC--TAATGGAGGACAATTGGCTTCT 110522
||||||||| ||||||| |||| ||||||||||| | | | | | || | ||
Sbjct 862482 TATTCATGCCTCTCCTACGTTATTCAACGCAGGAACCGTCAATCA--ATACTTATCCTCA 862425
Query 110523 TGCTTTCTTCTAGGAATTAACGATGATTCTATTGAAGGTATTTATGATGCTCTTAAAGAA 110582
|||||||| || ||||| || ||||| ||||| || || || | |||| | ||
Sbjct 862424 TGCTTTCTCCTTGGAATGTTAGAGGATTCAATTGATGGGATATACCGTACTCTACATAAA 862365
Query 110583 ACTGCTCTTATTTCTAAAAACTCTGGAGGAATTGGTATTCACGT-TCATGATATTCGCTC 110641
||||| | || || ||| ||||| || |||||||||| || ||| |||| |
Sbjct 862364 ACTGCGATGATATCAAAAGCTTCTGGCGGTGTTGGTATTCATGTATCA-AATATAAGGGG 862306
Query 110642 AAAAGGAGCAAATATCGCAACAGCGAAGGGTGCTTCAACTGGACTTGTTCCAATGTTAAG 110701
|| || || ||| || | || || |||| | ||| || ||||| ||| || |
Sbjct 862305 AAGCGGTGCGTTTATTTCAGGTTCAAATGGCACTTCGAATGGTCTGGTTCCTATGCTACG 862246
Query 110702 AGTCTTCAACGACACTGCAAAATATGTGAATCAAGGTGG---TAAGAGAAATGGCTCATT 110758
|| |||||| |||| || || || |||||||||| |||||| || | ||
Sbjct 862245 TGTTTTCAACAACACAGCTCGCTACGTTGATCAAGGTGGGAATAAGAGGCCGGGTGCCTT 862186
Query 110759 TGCTATCTATCTCGAACCTTGGCATTCAGATATATTTGAATTCTTAGAACTTCGTAAAAA 110818
| || || || || |||||||||| || || ||||| || ||| ||||||| || ||
Sbjct 862185 TTGCATATACCTAGAGCCTTGGCATTGTGACATTTTTGACTTTTTACAACTTCGGAAGAA 862126
Query 110819 TCAAGGATTTGAAGAACAAAGAGCACGTGATTTATTTTATGCAATGTGGATTTCAGATTT 110878
|| ||| |||||| |||||||| ||| | || ||||| | |||||| | || ||
Sbjct 862125 CCATGGAAAAGAAGAATTGAGAGCACGGGATCTTTTCTATGCTCTCTGGATTCCTGACTT 862066
Query 110879 ATTCATGAAACGTGTT 110894
||| ||||| || |||
Sbjct 862065 ATTTATGAAGCGCGTT 862050
>seq2
Length=1086951
Score = 98.7 bits (108), Expect = 2e-15
Identities = 125/169 (74%), Gaps = 6/169 (4%)
Strand=Plus/Minus
Query 305322 ATGATTGGGTTCTGTTCAATAGGCAACCATCACTGCATAAAATGTCTATGATGGCTCATA 305381
||||| ||| ||||||| | || || || ||||| ||||||||||||||||| || |
Sbjct 289495 ATGATCCTGTTTTGTTCAACCGTCAGCCTTCTCTGCACAAAATGTCTATGATGGCCCACA 289436
Query 305382 AAGTCAAAGTATTATCTGGATTGACATTTCGATTAAA--TGTAAGTG-CTTGTACGCCTT 305438
||| || ||| | || | || ||| |||| || | | ||| ||| | || |
Sbjct 289435 GAGTGAAGGTAATGCCTTATTCAACTTTTAGATTGAACCTTTCAGTCACTT---CACCAT 289379
Query 305439 ATAATGCGGATTTTGATGGAGATGAAATGAATATGCATGTACCTCAATC 305487
||||||| ||||| ||||| ||||||||||| ||||||| ||||||||
Sbjct 289378 ATAATGCCGATTTCGATGGTGATGAAATGAACTTGCATGTTCCTCAATC 289330
>seq5
Length=1346284
Score = 96.9 bits (106), Expect = 8e-15
Identities = 172/246 (70%), Gaps = 14/246 (6%)
Strand=Plus/Minus
Query 279857 TCTATTCCTCATTTAATGGATGGTTTGAAACCTTCACAGCGTAAGATTATATTCAGTTGT 279916
|| ||||| || | | |||||||| ||||| || || || || ||| |||||
Sbjct 1116131 TCAATTCCAAATGTTCTAGATGGTTTTAAACCAGGTCAACGGAAAGTTTTATATGGTTGT 1116072
Query 279917 TTCAAAAGAAAATTGGTAAAGG--AAATTCGTGTTGCTCAGTTAGCAGGTTATGTTTCAG 279974
|||||||| || ||| ||||| | ||| ||||| ||| || || ||| | || |
Sbjct 1116071 TTCAAAAGGAATTTG--AAAGGTGAGATTAAAGTTGCGCAGCTAATTGGGTATATCTCGG 1116014
Query 279975 AACATGCAGGTTATCATCACGGTGAAGCGTCTCT---TCAAGGTGCTATTGTAGGTCTTG 280031
| || | ||||||||||| ||||||| |||||| |||| ||||||| || | |
Sbjct 1116013 AGCACACCGGTTATCATCATGGTGAAGAGTCTCTCGCTCAA---ACTATTGTTGGAATGG 1115957
Query 280032 CCCAAGATTTTATGGCTTCAAACAACTTAAATCTGCTTTCA--CCAAATGGTCAATTTGG 280089
| ||||| ||||| | || |||||| | || || ||| | ||||||||| |||||
Sbjct 1115956 CGCAAGACTTTATAGGATCCAACAACATTAACCT--TTTAAAGCCAAATGGTGCTTTTGG 1115899
Query 280090 TTCTCG 280095
| ||||
Sbjct 1115898 TACTCG 1115893
>seq6
Length=1504611
Score = 86.0 bits (94), Expect = 1e-11
Identities = 116/158 (73%), Gaps = 4/158 (3%)
Strand=Plus/Minus
Query 305330 GTTCTGTTCAATAGGCAACCATCACTGCATAAAATGTCTATGATGGCTCATAAAGTCAAA 305389
||||| |||||||| ||||| || || || | | | || || | | ||| | | |||
Sbjct 266038 GTTCTATTCAATAGACAACCTTCTCTTCACAGATTATCAATCTTATCGCATTATGCCAAG 265979
Query 305390 GTATTATCT-GGATTGACATTTC-GATTAAATGTAAGTGCTTGTACGCCTTATAATGCGG 305447
| | || ||| || |||| ||||||||| ||| |||||||| || ||||| |
Sbjct 265978 ATTAGACCTTGGA--GAACTTTCAGATTAAATGAGTGTGTGTGTACGCCATACAATGCTG 265921
Query 305448 ATTTTGATGGAGATGAAATGAATATGCATGTACCTCAA 305485
|||||||||| |||||||||||| ||||||| || |||
Sbjct 265920 ATTTTGATGGTGATGAAATGAATTTGCATGTTCCGCAA 265883
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1186812678351688
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |