Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lachancea_20fermentati_20[genbank_20GCA_5F900074765.1_202016-10-26]
8 sequences; 10,264,457 total letters
Query= NC_025412.1
Length=369360
Score E
Sequences producing significant alignments: (Bits) Value
seq4 122 2e-22
seq6 113 1e-19
seq8 104 6e-17
>seq4
Length=1192607
Score = 122 bits (134), Expect = 2e-22
Identities = 158/216 (73%), Gaps = 2/216 (1%)
Strand=Plus/Plus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| || ||| || | || || || || ||||||||||| || || |||||||
Sbjct 499534 CAGATTTTCGTCAAGACTTTAACCGGTAAGACCATCACTTTGGAGGTTGAGTCTTCTGAC 499593
Query 206233 ACAGTCGA-ATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCA 206291
|| | || | | |||| | ||||||||||| || ||||| || || ||| ||
Sbjct 499594 ACGATAGACAACGTTAAATC-CAAGATTCAAGACAAGGAAGGTATCCCACCTGACCAGCA 499652
Query 206292 AAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGT 206351
|||||| || |||||||| ||||||||||| ||||| || || | | || |||||| |
Sbjct 499653 AAGACTGATTTTCGCCGGTAAGCAGTTGGAGGATGGCAGAACGCTTTCTGACTACAACAT 499712
Query 206352 CCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACT 206387
||| || ||||| || || ||| | |||||||||||
Sbjct 499713 CCAAAAGGAGTCCACGCTCCACTTGGTTTTGAGACT 499748
Score = 116 bits (128), Expect = 9e-21
Identities = 157/216 (73%), Gaps = 2/216 (1%)
Strand=Plus/Plus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| || ||| || || || || || || ||||| |||||||| ||| |||||
Sbjct 498850 CAGATCTTCGTCAAGACTCTAACCGGTAAGACCATCACCTTGGAAGTCGAATCCTCTGAT 498909
Query 206233 ACAGTCGA-ATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCA 206291
|| |||| | | |||| | || ||| || || || ||||| ||| || ||| ||
Sbjct 498910 ACCATCGACAACGTTAAATCCAA-GATCCAGGATAAGGAAGGTATTCCACCTGACCAGCA 498968
Query 206292 AAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGT 206351
|||||| || ||||| || ||||||||||| ||||| || || | | || |||||| |
Sbjct 498969 AAGACTGATTTTCGCTGGTAAGCAGTTGGAGGATGGCAGAACGCTTTCTGACTACAACAT 499028
Query 206352 CCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACT 206387
||| || ||||||||| | || | |||||||||||
Sbjct 499029 CCAAAAGGAGTCTACTTTACATTTGGTTTTGAGACT 499064
Score = 114 bits (126), Expect = 3e-20
Identities = 153/213 (72%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| || ||| || || || || || || ||||| |||||||| ||| |||||
Sbjct 499762 CAGATCTTCGTCAAGACTCTAACCGGTAAGACCATCACCTTGGAAGTCGAATCCTCTGAT 499821
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
|| |||| || ||| ||||||||||| || ||||| ||| || ||| |||
Sbjct 499822 ACCATCGACAACGTTAAGTCCAAGATTCAAGACAAGGAAGGTATTCCACCTGACCAGCAA 499881
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
||| | || |||||||| ||||| ||||| ||||| || ||| | | |||||||| |
Sbjct 499882 AGATTGATTTTCGCCGGTAAGCAATTGGAGGATGGCAGAACTCTTTCTGATTACAATATT 499941
Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGA 206385
|| || || ||||| | ||| | |||||||||
Sbjct 499942 CAAAAGGAATCTACCTTACACTTGGTTTTGAGA 499974
Score = 109 bits (120), Expect = 1e-18
Identities = 153/215 (71%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| || ||| || || || || || || || |||||||| || || |||||||
Sbjct 499306 CAGATCTTCGTCAAGACTCTAACCGGTAAGACTATTACTTTGGAGGTTGAGTCTTCTGAC 499365
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
|| | || || || ||||||||||| || ||||| ||| || ||| |||
Sbjct 499366 ACGATAGACAACGTCAAATCCAAGATTCAAGACAAGGAAGGTATTCCACCAGACCAACAA 499425
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
||| | || |||||||| ||||| ||||| ||||| || || | | || |||||| |
Sbjct 499426 AGATTGATTTTCGCCGGTAAGCAATTGGAGGATGGCAGAACGCTTTCTGACTACAACATT 499485
Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACT 206387
|| || ||||||||| | || | |||||||||||
Sbjct 499486 CAAAAGGAGTCTACTTTACATTTGGTTTTGAGACT 499520
Score = 104 bits (114), Expect = 6e-17
Identities = 152/215 (71%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| || ||| || | ||||| || || || || |||||||| ||| |||||
Sbjct 499078 CAGATTTTCGTCAAGACTTTGACAGGTAAGACTATTACCTTGGAAGTCGAATCCTCTGAT 499137
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
|| |||| || || ||||||||||| || ||||| ||| || ||| |||
Sbjct 499138 ACCATCGACAATGTCAAATCCAAGATTCAAGACAAGGAAGGTATTCCACCTGACCAGCAA 499197
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
||| | || |||||||| ||||| ||||| ||||| || ||| | | |||||||| |
Sbjct 499198 AGATTGATTTTCGCCGGTAAGCAATTGGAGGATGGCAGAACTCTTTCTGATTACAATATT 499257
Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACT 206387
|| || || ||||| | ||| | |||||||| ||
Sbjct 499258 CAAAAGGAATCTACCTTACACTTGGTTTTGAGGCT 499292
Score = 91.5 bits (100), Expect = 3e-13
Identities = 155/224 (69%), Gaps = 3/224 (1%)
Strand=Plus/Plus
Query 206164 AAAATGTACCAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAA 206223
|||||| ||||| || ||| || | || || || || |||||| |||| || |||
Sbjct 498616 AAAATG---CAGATTTTCGTCAAGACTTTAACCGGCAAGACCATCACTCTGGAGGTTGAA 498672
Query 206224 AGTTCTGACACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCG 206283
||||| || |||| || || ||||| || || || ||||| ||| ||
Sbjct 498673 TCCTCTGATACCATCGACAACGTCAAATCCAAGATCCAGGATAAGGAAGGTATTCCACCT 498732
Query 206284 GACGCTCAAAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGAT 206343
|| |||||| | || ||||| || ||||||||||| ||||| || ||| | | |||
Sbjct 498733 GATCAACAAAGATTGATTTTCGCTGGTAAGCAGTTGGAGGATGGCAGAACTCTTTCTGAT 498792
Query 206344 TACAACGTCCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACT 206387
||||| | || || || ||||| | ||||| |||||||| ||
Sbjct 498793 TACAATATTCAAAAGGAATCTACCTTACACCTGGTTTTGAGGCT 498836
>seq6
Length=1504611
Score = 113 bits (124), Expect = 1e-19
Identities = 140/192 (73%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAA 206253
|| || || || || ||||||||||| ||| ||| ||||| | || || |||
Sbjct 86097 ACTGGTAAGACCATTACTTTGGAAGTCGAATCTTCAGACACCATTGACAACGTCAAGTCT 86156
Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313
||||||||||| || ||||| ||| || ||| |||||| | ||||| || || |||
Sbjct 86157 AAGATTCAAGACAAGGAAGGTATTCCTCCTGACCAACAAAGATTGATCTTTGCTGGTAAG 86216
Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373
|| ||||||||||| || || ||| | || |||||| | || || || ||||| | |||
Sbjct 86217 CAATTGGAAGATGGCAGAACCTTGTCTGACTACAACATTCAAAAGGAATCTACCTTGCAC 86276
Query 206374 CTTGTTTTGAGA 206385
| |||||||||
Sbjct 86277 TTGGTTTTGAGA 86288
>seq8
Length=1564113
Score = 104 bits (114), Expect = 6e-17
Identities = 138/192 (72%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAA 206253
|| || || || || || | ||||| || ||||||||| |||| || |||
Sbjct 561208 ACCGGTAAGACAATTACCCTTGAAGTCGAGTCTTCTGACACTATCGACAATGTCAAGTCC 561149
Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313
||||| ||||| || || || || || ||| |||||| | ||||| || || |||
Sbjct 561148 AAGATCCAAGACAAGGAGGGTATCCCACCTGACCAACAAAGATTGATCTTTGCTGGTAAG 561089
Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373
|| ||||||||||| || |||||| | || |||||| |||| || |||||||| | |||
Sbjct 561088 CAATTGGAAGATGGCAGAACTTTGTCTGACTACAACATCCAAAAGGAGTCTACCTTGCAC 561029
Query 206374 CTTGTTTTGAGA 206385
| |||||||||
Sbjct 561028 TTGGTTTTGAGA 561017
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1181820678863368
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |