Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lachancea_20fermentati_20[genbank_20GCA_5F900074765.1_202016-10-26] 8 sequences; 10,264,457 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq4 122 2e-22 seq6 113 1e-19 seq8 104 6e-17 >seq4 Length=1192607 Score = 122 bits (134), Expect = 2e-22 Identities = 158/216 (73%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || ||| || | || || || || ||||||||||| || || ||||||| Sbjct 499534 CAGATTTTCGTCAAGACTTTAACCGGTAAGACCATCACTTTGGAGGTTGAGTCTTCTGAC 499593 Query 206233 ACAGTCGA-ATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCA 206291 || | || | | |||| | ||||||||||| || ||||| || || ||| || Sbjct 499594 ACGATAGACAACGTTAAATC-CAAGATTCAAGACAAGGAAGGTATCCCACCTGACCAGCA 499652 Query 206292 AAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGT 206351 |||||| || |||||||| ||||||||||| ||||| || || | | || |||||| | Sbjct 499653 AAGACTGATTTTCGCCGGTAAGCAGTTGGAGGATGGCAGAACGCTTTCTGACTACAACAT 499712 Query 206352 CCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACT 206387 ||| || ||||| || || ||| | ||||||||||| Sbjct 499713 CCAAAAGGAGTCCACGCTCCACTTGGTTTTGAGACT 499748 Score = 116 bits (128), Expect = 9e-21 Identities = 157/216 (73%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || ||| || || || || || || ||||| |||||||| ||| ||||| Sbjct 498850 CAGATCTTCGTCAAGACTCTAACCGGTAAGACCATCACCTTGGAAGTCGAATCCTCTGAT 498909 Query 206233 ACAGTCGA-ATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCA 206291 || |||| | | |||| | || ||| || || || ||||| ||| || ||| || Sbjct 498910 ACCATCGACAACGTTAAATCCAA-GATCCAGGATAAGGAAGGTATTCCACCTGACCAGCA 498968 Query 206292 AAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGT 206351 |||||| || ||||| || ||||||||||| ||||| || || | | || |||||| | Sbjct 498969 AAGACTGATTTTCGCTGGTAAGCAGTTGGAGGATGGCAGAACGCTTTCTGACTACAACAT 499028 Query 206352 CCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACT 206387 ||| || ||||||||| | || | ||||||||||| Sbjct 499029 CCAAAAGGAGTCTACTTTACATTTGGTTTTGAGACT 499064 Score = 114 bits (126), Expect = 3e-20 Identities = 153/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || ||| || || || || || || ||||| |||||||| ||| ||||| Sbjct 499762 CAGATCTTCGTCAAGACTCTAACCGGTAAGACCATCACCTTGGAAGTCGAATCCTCTGAT 499821 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || |||| || ||| ||||||||||| || ||||| ||| || ||| ||| Sbjct 499822 ACCATCGACAACGTTAAGTCCAAGATTCAAGACAAGGAAGGTATTCCACCTGACCAGCAA 499881 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 ||| | || |||||||| ||||| ||||| ||||| || ||| | | |||||||| | Sbjct 499882 AGATTGATTTTCGCCGGTAAGCAATTGGAGGATGGCAGAACTCTTTCTGATTACAATATT 499941 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGA 206385 || || || ||||| | ||| | ||||||||| Sbjct 499942 CAAAAGGAATCTACCTTACACTTGGTTTTGAGA 499974 Score = 109 bits (120), Expect = 1e-18 Identities = 153/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || ||| || || || || || || || |||||||| || || ||||||| Sbjct 499306 CAGATCTTCGTCAAGACTCTAACCGGTAAGACTATTACTTTGGAGGTTGAGTCTTCTGAC 499365 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || | || || || ||||||||||| || ||||| ||| || ||| ||| Sbjct 499366 ACGATAGACAACGTCAAATCCAAGATTCAAGACAAGGAAGGTATTCCACCAGACCAACAA 499425 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 ||| | || |||||||| ||||| ||||| ||||| || || | | || |||||| | Sbjct 499426 AGATTGATTTTCGCCGGTAAGCAATTGGAGGATGGCAGAACGCTTTCTGACTACAACATT 499485 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACT 206387 || || ||||||||| | || | ||||||||||| Sbjct 499486 CAAAAGGAGTCTACTTTACATTTGGTTTTGAGACT 499520 Score = 104 bits (114), Expect = 6e-17 Identities = 152/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || ||| || | ||||| || || || || |||||||| ||| ||||| Sbjct 499078 CAGATTTTCGTCAAGACTTTGACAGGTAAGACTATTACCTTGGAAGTCGAATCCTCTGAT 499137 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || |||| || || ||||||||||| || ||||| ||| || ||| ||| Sbjct 499138 ACCATCGACAATGTCAAATCCAAGATTCAAGACAAGGAAGGTATTCCACCTGACCAGCAA 499197 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 ||| | || |||||||| ||||| ||||| ||||| || ||| | | |||||||| | Sbjct 499198 AGATTGATTTTCGCCGGTAAGCAATTGGAGGATGGCAGAACTCTTTCTGATTACAATATT 499257 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACT 206387 || || || ||||| | ||| | |||||||| || Sbjct 499258 CAAAAGGAATCTACCTTACACTTGGTTTTGAGGCT 499292 Score = 91.5 bits (100), Expect = 3e-13 Identities = 155/224 (69%), Gaps = 3/224 (1%) Strand=Plus/Plus Query 206164 AAAATGTACCAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAA 206223 |||||| ||||| || ||| || | || || || || |||||| |||| || ||| Sbjct 498616 AAAATG---CAGATTTTCGTCAAGACTTTAACCGGCAAGACCATCACTCTGGAGGTTGAA 498672 Query 206224 AGTTCTGACACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCG 206283 ||||| || |||| || || ||||| || || || ||||| ||| || Sbjct 498673 TCCTCTGATACCATCGACAACGTCAAATCCAAGATCCAGGATAAGGAAGGTATTCCACCT 498732 Query 206284 GACGCTCAAAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGAT 206343 || |||||| | || ||||| || ||||||||||| ||||| || ||| | | ||| Sbjct 498733 GATCAACAAAGATTGATTTTCGCTGGTAAGCAGTTGGAGGATGGCAGAACTCTTTCTGAT 498792 Query 206344 TACAACGTCCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACT 206387 ||||| | || || || ||||| | ||||| |||||||| || Sbjct 498793 TACAATATTCAAAAGGAATCTACCTTACACCTGGTTTTGAGGCT 498836 >seq6 Length=1504611 Score = 113 bits (124), Expect = 1e-19 Identities = 140/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAA 206253 || || || || || ||||||||||| ||| ||| ||||| | || || ||| Sbjct 86097 ACTGGTAAGACCATTACTTTGGAAGTCGAATCTTCAGACACCATTGACAACGTCAAGTCT 86156 Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313 ||||||||||| || ||||| ||| || ||| |||||| | ||||| || || ||| Sbjct 86157 AAGATTCAAGACAAGGAAGGTATTCCTCCTGACCAACAAAGATTGATCTTTGCTGGTAAG 86216 Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373 || ||||||||||| || || ||| | || |||||| | || || || ||||| | ||| Sbjct 86217 CAATTGGAAGATGGCAGAACCTTGTCTGACTACAACATTCAAAAGGAATCTACCTTGCAC 86276 Query 206374 CTTGTTTTGAGA 206385 | ||||||||| Sbjct 86277 TTGGTTTTGAGA 86288 >seq8 Length=1564113 Score = 104 bits (114), Expect = 6e-17 Identities = 138/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAA 206253 || || || || || || | ||||| || ||||||||| |||| || ||| Sbjct 561208 ACCGGTAAGACAATTACCCTTGAAGTCGAGTCTTCTGACACTATCGACAATGTCAAGTCC 561149 Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313 ||||| ||||| || || || || || ||| |||||| | ||||| || || ||| Sbjct 561148 AAGATCCAAGACAAGGAGGGTATCCCACCTGACCAACAAAGATTGATCTTTGCTGGTAAG 561089 Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373 || ||||||||||| || |||||| | || |||||| |||| || |||||||| | ||| Sbjct 561088 CAATTGGAAGATGGCAGAACTTTGTCTGACTACAACATCCAAAAGGAGTCTACCTTGCAC 561029 Query 206374 CTTGTTTTGAGA 206385 | ||||||||| Sbjct 561028 TTGGTTTTGAGA 561017 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181820678863368