Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lachancea_20fermentati_20[genbank_20GCA_5F900074765.1_202016-10-26]
8 sequences; 10,264,457 total letters
Query= NC_026268.1
Length=139132
Score E
Sequences producing significant alignments: (Bits) Value
seq4 113 4e-20
seq8 87.8 2e-12
>seq4
Length=1192607
Score = 113 bits (124), Expect = 4e-20
Identities = 163/230 (71%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234
||||| | || || || || ||||||| || | ||||| | ||||||||| ||
Sbjct 499759 ATGCAGATCTTCGTCAAGACTCTAACCGGTAAGACCATCACCTTGGAAGTCGAATCCTCT 499818
Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294
||||| ||||| | || || || ||| || || || ||||| || || || |||
Sbjct 499819 GATACCATCGACAACGTTAAGTCCAAGATTCAAGACAAGGAAGGTATTCCACCTGACCAG 499878
Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAAT 25354
|||||| | |||| || ||| || ||| | || |||| |||| | | |||||||||
Sbjct 499879 CAAAGATTGATTTTCGCCGGTAAGCAATTGGAGGATGGCAGAACTCTTTCTGATTACAAT 499938
Query 25355 ATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGGAAA 25404
|||||||| ||||| ||| | || || || || ||||| ||||| || ||
Sbjct 499939 ATTCAAAAGGAATCTACCTTACACTTGGTTTTGAGATTAAGAGGTGGTAA 499988
Score = 98.7 bits (108), Expect = 9e-16
Identities = 158/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234
||||| | || || || || || || || || | || || | ||||||||| ||
Sbjct 499075 ATGCAGATTTTCGTCAAGACTTTGACAGGTAAGACTATTACCTTGGAAGTCGAATCCTCT 499134
Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294
||||| ||||| | || ||| || ||| || || || ||||| || || || |||
Sbjct 499135 GATACCATCGACAATGTCAAATCCAAGATTCAAGACAAGGAAGGTATTCCACCTGACCAG 499194
Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAAT 25354
|||||| | |||| || ||| || ||| | || |||| |||| | | |||||||||
Sbjct 499195 CAAAGATTGATTTTCGCCGGTAAGCAATTGGAGGATGGCAGAACTCTTTCTGATTACAAT 499254
Query 25355 ATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401
|||||||| ||||| ||| | || || || || || | ||||| ||
Sbjct 499255 ATTCAAAAGGAATCTACCTTACACTTGGTTTTGAGGCTAAGAGGTGG 499301
Score = 91.5 bits (100), Expect = 1e-13
Identities = 158/230 (69%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 25172 AACATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCC 25231
|| ||||| | || || || || |||||||| || | ||||| | || || ||| ||
Sbjct 498616 AAAATGCAGATTTTCGTCAAGACTTTAACCGGCAAGACCATCACTCTGGAGGTTGAATCC 498675
Query 25232 AACGATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGAT 25291
||||| ||||| | || ||| || || ||||| || ||||| || || |||
Sbjct 498676 TCTGATACCATCGACAACGTCAAATCCAAGATCCAGGATAAGGAAGGTATTCCACCTGAT 498735
Query 25292 CAGCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTAC 25351
|| |||||| | |||| || || || || | || |||| |||| | | ||||||
Sbjct 498736 CAACAAAGATTGATTTTCGCTGGTAAGCAGTTGGAGGATGGCAGAACTCTTTCTGATTAC 498795
Query 25352 AATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401
||||||||||| ||||| ||| | || | || || || | ||||| ||
Sbjct 498796 AATATTCAAAAGGAATCTACCTTACACCTGGTTTTGAGGCTAAGAGGTGG 498845
Score = 86.0 bits (94), Expect = 6e-12
Identities = 155/227 (68%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234
||||| | || || || || ||||||| || | ||||| | ||||||||| ||
Sbjct 498847 ATGCAGATCTTCGTCAAGACTCTAACCGGTAAGACCATCACCTTGGAAGTCGAATCCTCT 498906
Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294
||||| ||||| | || ||| || || ||||| || ||||| || || || |||
Sbjct 498907 GATACCATCGACAACGTTAAATCCAAGATCCAGGATAAGGAAGGTATTCCACCTGACCAG 498966
Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAAT 25354
|||||||| |||| || || || || | || |||| |||| | || |||||
Sbjct 498967 CAAAGACTGATTTTCGCTGGTAAGCAGTTGGAGGATGGCAGAACGCTTTCTGACTACAAC 499026
Query 25355 ATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401
|| ||||| || || || | ||||| || || ||| | ||||| ||
Sbjct 499027 ATCCAAAAGGAGTCTACTTTACATTTGGTTTTGAGACTAAGAGGTGG 499073
>seq8
Length=1564113
Score = 87.8 bits (96), Expect = 2e-12
Identities = 158/231 (68%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 25171 CAACATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGC 25230
||| |||||| | ||||| || || |||||||| || | || || | |||||||| |
Sbjct 561236 CAAGATGCAAATTTTTGTTAAGACCTTAACCGGTAAGACAATTACCCTTGAAGTCGAGTC 561177
Query 25231 CAACGATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGA 25290
|| |||||||| | || || || || || || |||||||| || || ||
Sbjct 561176 TTCTGACACTATCGACAATGTCAAGTCCAAGATCCAAGACAAGGAGGGTATCCCACCTGA 561117
Query 25291 TCAGCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTA 25350
|| |||||| | || | | || || ||| | ||||||| |||| | | || ||
Sbjct 561116 CCAACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGCAGAACTTTGTCTGACTA 561057
Query 25351 CAATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401
||| || ||||| || || ||| | || || || || ||||||||||| ||
Sbjct 561056 CAACATCCAAAAGGAGTCTACCTTGCACTTGGTTTTGAGATTGAGAGGTGG 561006
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445094355490560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |