Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lachancea_20fermentati_20[genbank_20GCA_5F900074765.1_202016-10-26]
8 sequences; 10,264,457 total letters
Query= NC_026430.1
Length=125767
Score E
Sequences producing significant alignments: (Bits) Value
seq4 87.8 1e-12
seq6 84.2 2e-11
>seq4
Length=1192607
Score = 87.8 bits (96), Expect = 1e-12
Identities = 167/245 (68%), Gaps = 1/245 (0%)
Strand=Plus/Plus
Query 106242 ATTTATAAGAGTTTAAAAATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACC 106301
||||||| || | ||||||||| ||||| || || || || || ||||||||||| ||
Sbjct 498602 ATTTATAC-AGCTGAAAAATGCAGATTTTCGTCAAGACTTTAACCGGCAAGACCATCACT 498660
Query 106302 GTGGAAACAGAACCCGGCGATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAA 106361
|||| ||| || ||| | | | | | || ||| || || || || |||
Sbjct 498661 CTGGAGGTTGAATCCTCTGATACCATCGACAACGTCAAATCCAAGATCCAGGATAAGGAA 498720
Query 106362 GGCGTGCCCGTTGATCAACAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAA 106421
|| | || |||||||||||| | |||| || || || || || || ||| | |
Sbjct 498721 GGTATTCCACCTGATCAACAAAGATTGATTTTCGCTGGTAAGCAGTTGGAGGATGGCAGA 498780
Query 106422 ACTATGGGCGATTACAACATACAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGA 106481
||| | |||||||| || ||||| |||||||| |||| | || |||||| || ||
Sbjct 498781 ACTCTTTCTGATTACAATATTCAAAAGGAATCTACCTTACACCTGGTTTTGAGGCTAAGA 498840
Query 106482 GGAGG 106486
|| ||
Sbjct 498841 GGTGG 498845
>seq6
Length=1504611
Score = 84.2 bits (92), Expect = 2e-11
Identities = 150/219 (68%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 106268 TTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGCGATTCTGT 106327
|||||| || || |||||||| ||||||||||| ||||| ||| | || | |
Sbjct 86081 TTTTGTGAAGACCTTGACTGGTAAGACCATTACTTTGGAAGTCGAATCTTCAGACACCAT 86140
Query 106328 TGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAACAAAGGCT 106387
|| | | || || || ||| ||||| ||||| | || ||| |||||||| |
Sbjct 86141 TGACAACGTCAAGTCTAAGATTCAAGACAAGGAAGGTATTCCTCCTGACCAACAAAGATT 86200
Query 106388 TATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAACATACAAAA 106447
|| | ||| || || ||||| |||||| | ||| || || |||||||| |||||
Sbjct 86201 GATCTTTGCTGGTAAGCAATTGGAAGATGGCAGAACCTTGTCTGACTACAACATTCAAAA 86260
Query 106448 AGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGG 106486
|||||||| | || || || ||||| || |||| ||
Sbjct 86261 GGAATCTACCTTGCACTTGGTTTTGAGATTGAGAGGTGG 86299
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 402329560772864
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |