Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lachancea_20fermentati_20[genbank_20GCA_5F900074765.1_202016-10-26]
8 sequences; 10,264,457 total letters
Query= NC_026922.1
Length=157977
Score E
Sequences producing significant alignments: (Bits) Value
seq4 138 1e-27
seq8 114 1e-20
seq6 111 2e-19
>seq4
Length=1192607
Score = 138 bits (152), Expect = 1e-27
Identities = 169/228 (74%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
|| ||||| |||| ||| || | ||| |||||||| |||||||| ||||||||||| |
Sbjct 499757 CCACCTCTTAGTCTCAAAACCAAGTGGAGCGTGGACTCCTTTTGGATGTTGTAGTCAGAA 499698
Query 134547 A-CGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605
| || | || | || || | ||| || || || ||||||| | ||||| || || ||
Sbjct 499697 AGCGTTCTGCCA-TCCTCCAACTGCTTACCGGCGAAAATCAGTCTTTGCTGGTCAGGTGG 499639
Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665
|| ||||| || |||||||| || ||| || ||| | ||||| || || || ||
Sbjct 499638 GATACCTTCCTTGTCTTGAATCTTGGATTTAACGTTGTCTATCGTGTCAGAAGACTCAAC 499579
Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| | ||| ||||| |||||||||||||| || |||||||| |||||
Sbjct 499578 CTCCAAAGTGATGGTCTTACCGGTTAAAGTCTTGACGAAAATCTGCAT 499531
Score = 131 bits (144), Expect = 2e-25
Identities = 169/231 (73%), Gaps = 2/231 (1%)
Strand=Plus/Minus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
|| ||||| || | ||| || ||||||| || |||||||||||||| ||||| || |
Sbjct 498845 CCACCTCTTAGCCTCAAAACCAGGTGTAAGGTAGATTCCTTTTGAATATTGTAATCAGAA 498786
Query 134547 ACGGTG-TGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605
| || || | || || | ||| || || || |||||||| | || ||||| || ||
Sbjct 498785 AGAGTTCTGCCA-TCCTCCAACTGCTTACCAGCGAAAATCAATCTTTGTTGATCAGGTGG 498727
Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665
|| ||||| || || || || || |||||| ||| | || || || ||||| ||
Sbjct 498726 AATACCTTCCTTATCCTGGATCTTGGATTTGACGTTGTCGATGGTATCAGAGGATTCAAC 498667
Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTT 134716
|| ||||| ||||| || ||||||||||| || |||||||| ||||||||
Sbjct 498666 CTCCAGAGTGATGGTCTTGCCGGTTAAAGTCTTGACGAAAATCTGCATTTT 498616
Score = 120 bits (132), Expect = 3e-22
Identities = 165/228 (72%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCC 134545
|| ||||| |||| ||| || | |||| || || |||||||||||||||||||| |
Sbjct 499529 CCACCTCTTAGTCTCAAAACCAAATGTAAAGTAGACTCCTTTTGAATGTTGTAGTCAGAA 499470
Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605
| || | || | || || | || || || || |||||||| | || || || || ||
Sbjct 499469 AGCGTTCTGCCA-TCCTCCAATTGCTTACCGGCGAAAATCAATCTTTGTTGGTCTGGTGG 499411
Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665
|| ||||| || |||||||| || |||||| ||| | ||||| || || || ||
Sbjct 499410 AATACCTTCCTTGTCTTGAATCTTGGATTTGACGTTGTCTATCGTGTCAGAAGACTCAAC 499351
Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| | |||||| || |||||||||| ||| || ||||| || |||||
Sbjct 499350 CTCCAAAGTAATAGTCTTACCGGTTAGAGTCTTGACGAAGATCTGCAT 499303
Score = 111 bits (122), Expect = 2e-19
Identities = 163/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCC 134545
|| ||||| || | ||| || | ||||| || |||||||||||||| ||||| || |
Sbjct 499301 CCACCTCTTAGCCTCAAAACCAAGTGTAAGGTAGATTCCTTTTGAATATTGTAATCAGAA 499242
Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605
| | | || | || || | || || || || |||||||| | ||||| || || ||
Sbjct 499241 AGAGTTCTGCCA-TCCTCCAATTGCTTACCGGCGAAAATCAATCTTTGCTGGTCAGGTGG 499183
Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665
|| ||||| || |||||||| || |||||| ||| | || || || ||||| ||
Sbjct 499182 AATACCTTCCTTGTCTTGAATCTTGGATTTGACATTGTCGATGGTATCAGAGGATTCGAC 499123
Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| | ||||| || ||||| || ||||| || |||||||| |||||
Sbjct 499122 TTCCAAGGTAATAGTCTTACCTGTCAAAGTCTTGACGAAAATCTGCAT 499075
Score = 104 bits (114), Expect = 2e-17
Identities = 163/231 (71%), Gaps = 2/231 (1%)
Strand=Plus/Minus
Query 134484 TTTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC- 134542
|| || ||||| | || ||| || | ||||| || |||||||||||||| ||||| ||
Sbjct 499988 TTACCACCTCTTAATCTCAAAACCAAGTGTAAGGTAGATTCCTTTTGAATATTGTAATCA 499929
Query 134543 GCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGG 134602
| | | | || | || || | || || || || |||||||| | ||||| || ||
Sbjct 499928 GAAAGAGTTCTGCCA-TCCTCCAATTGCTTACCGGCGAAAATCAATCTTTGCTGGTCAGG 499870
Query 134603 CGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTC 134662
|| || ||||| || |||||||| || || || ||| | || || || |||||
Sbjct 499869 TGGAATACCTTCCTTGTCTTGAATCTTGGACTTAACGTTGTCGATGGTATCAGAGGATTC 499810
Query 134663 CACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| || | || ||||| |||||||||| ||| || ||||| || |||||
Sbjct 499809 GACTTCCAAGGTGATGGTCTTACCGGTTAGAGTCTTGACGAAGATCTGCAT 499759
Score = 102 bits (112), Expect = 8e-17
Identities = 161/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCC 134545
|| ||||| |||| ||| || | |||| || || |||||||| ||||||||||| |
Sbjct 499073 CCACCTCTTAGTCTCAAAACCAAATGTAAAGTAGACTCCTTTTGGATGTTGTAGTCAGAA 499014
Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605
| || | || | || || | ||| || || || ||||||| | ||||| || || ||
Sbjct 499013 AGCGTTCTGCCA-TCCTCCAACTGCTTACCAGCGAAAATCAGTCTTTGCTGGTCAGGTGG 498955
Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665
|| ||||| || || || || || ||| || ||| | || || || ||||| ||
Sbjct 498954 AATACCTTCCTTATCCTGGATCTTGGATTTAACGTTGTCGATGGTATCAGAGGATTCGAC 498895
Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| | || ||||| |||||||||| ||| || ||||| || |||||
Sbjct 498894 TTCCAAGGTGATGGTCTTACCGGTTAGAGTCTTGACGAAGATCTGCAT 498847
>seq8
Length=1564113
Score = 114 bits (126), Expect = 1e-20
Identities = 166/232 (72%), Gaps = 2/232 (1%)
Strand=Plus/Plus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCC 134545
|| ||||| | || ||| || | ||| | || || |||||||| ||||||||||| | |
Sbjct 561006 CCACCTCTCAATCTCAAAACCAAGTGCAAGGTAGACTCCTTTTGGATGTTGTAGTCAGAC 561065
Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605
|| | | || | || || | || || || ||||| ||||| | || || || || ||
Sbjct 561066 AAAGTTCTGCCA-TCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGG 561124
Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665
|| || || || ||||| || || ||||| ||| | ||||| || || || ||
Sbjct 561125 GATACCCTCCTTGTCTTGGATCTTGGACTTGACATTGTCGATAGTGTCAGAAGACTCGAC 561184
Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTG 134717
|| || ||||| || ||||||||||| || ||||| ||||||||||| |||
Sbjct 561185 TTCAAGGGTAATTGTCTTACCGGTTAAGGTCTTAACAAAAATTTGCATCTTG 561236
>seq6
Length=1504611
Score = 111 bits (122), Expect = 2e-19
Identities = 158/220 (72%), Gaps = 2/220 (1%)
Strand=Plus/Minus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCC 134545
|| ||||| | || ||| || | ||| | || ||||||||||||||||||||||| | |
Sbjct 86299 CCACCTCTCAATCTCAAAACCAAGTGCAAGGTAGATTCCTTTTGAATGTTGTAGTCAGAC 86240
Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605
|| | | || | || || | || || || ||||| ||||| | || || || || ||
Sbjct 86239 AAGGTTCTGCCA-TCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGAGG 86181
Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665
|| ||||| || |||||||| || ||||| ||| | ||||| || ||||| ||
Sbjct 86180 AATACCTTCCTTGTCTTGAATCTTAGACTTGACGTTGTCAATGGTGTCTGAAGATTCGAC 86121
Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAA 134705
|| | ||||||||| ||||| || || || || || |||
Sbjct 86120 TTCCAAAGTAATGGTCTTACCAGTCAAGGTCTTCACAAAA 86081
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 505398349460160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |