Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lachancea_20fermentati_20[genbank_20GCA_5F900074765.1_202016-10-26] 8 sequences; 10,264,457 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq2 318 8e-82 seq1 129 8e-25 >seq2 Length=1086951 Score = 318 bits (352), Expect = 8e-82 Identities = 1297/2028 (64%), Gaps = 41/2028 (2%) Strand=Plus/Plus Query 68413 TAGTACATACCGGTTTTCAGACCTAGACTCCATCCGTAGAAATGCATACTTGTTAGTTTG 68472 |||||||||||||| |||| ||| |||||||||| || |||||||| || | ||| Sbjct 389318 TAGTACATACCGGTCTTCAAACCCTTCTTCCATCCGTAAAAGTGCATACTGGTCAATTTA 389377 Query 68473 GAATAACTTGGATCGGCTATATGAATATTCATCGATTGACTTTGATCGATGAAAGCTCCT 68532 ||||| | ||||| | |||| ||||| |||||| ||| | Sbjct 389378 CCCATTGTTGGAGCACGAATATGCACGTTCAAAGATTGTGATTGATCAATGTAGCAAGAA 389437 Query 68533 CTATCTGCCGCCATTTTTATAATACTCTTTTGAGGAATTTCCCAAATAGTCTTAAAAATC 68592 | ||| || ||||| | ||||| ||||||||| | |||||| | ||||| ||| Sbjct 389438 CGATCAGCAGCCATGTCAATAATTGTCTTTTGAGACAATTCCCAGACTGTCTTGTAAAGG 389497 Query 68593 TGTTTGATATCATCTGGAAGGCTCG-TA--TTTTGAATGGATCCACCATCGGATATAATT 68649 | || | || | |||| | | | || ||||||||||| || || || ||||| Sbjct 389498 TCCTTCAATTCTTGAGGAATGTTGGGTAGGTTTTGAATGGAACCGTTGTCAGAAATAATG 389557 Query 68650 ATATTCTTGATCTCATCATTCCACAATTTTCTCTCCGTTAAAACTCTAAGGAGATGCGGA 68709 | ||| || | |||| ||| | ||| ||| | | | | | |||| Sbjct 389558 TGAGACTTCATAGCTTCATCCCATAGACCCAAATCCACCAAATCACGCAACAAGTACGGA 389617 Query 68710 TTAACTATTTGAAATTCCCCAGATAACACTCTACGAGTGTAAATATTACTGGTATATGGT 68769 || || ||||| ||||| || |||| || | ||| | ||| || || |||||||||| Sbjct 389618 TTGACAATTTGGAATTCACCTGATAGAACACGACGTGAGTACATGTTTGAGGTATATGGT 389677 Query 68770 TCCACAGATTCATTATTTCCCAGAATTTGAGCAGTTGATGCAGTTGGCATAGGTGCCACC 68829 || | | |||| || | |||| || || | ||| || ||||||||||| || || | | Sbjct 389678 TCGAAACATTCGTTGTAACCCAAGATCTGGGAAGTAGAGGCAGTTGGCATTGGGGCTAGC 389737 Query 68830 AATAAACTATTTCTAAGACCATGTGTTATGATTTTATCTTTTAGATGTTTCCAATCCCAA 68889 || | | ||||||| ||| | | | || || | || | | | || ||||||||| Sbjct 389738 AACAGAGAGTTTCTAATACCGTCTTTGATAATGTCTGCTCTCAAAGTTTCCCAATCCCAT 389797 Query 68890 AGATCAGATGGTACAACATTCCAAAGATCGTATTGTAGAATTCCGTTACTTGCATATGAT 68949 ||||||| ||| ||| | || |||| ||||| || | ||| ||| Sbjct 389798 AGATCAGTAGGTGTCCTGCCCCACATGTCAAATTGAAGAATACCCTCGGCAGCAGGGGAT 389857 Query 68950 CCATTATATGTTTCATAAGGTCCTTCCTGTTCAGCTAGTTCACAACTTGCCTCTAATGCA 69009 || || |||| || || || || || | || | || |||||||| ||| Sbjct 389858 CCCTTGAATGTCTCGTATGGGCCCTCTTCCAGGGCCAACTCGTGTGATGCCTCTAGGGCA 389917 Query 69010 CCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGACTATCGAAT 69069 ||| ||| || || || || | | |||| | |||| || || || ||||| Sbjct 389918 GCGTGATACATAGTCTCAAAGACGTGAATATTCAATTCTTTGGCCTCCTGAGAGTCGAAA 389977 Query 69070 GGATAATGTAAAAGAATAAATGCATCTGCCAATCCCTGAACCCCAATACCGATAGGTCTA 69129 ||| | | || | || || | ||| ||||| || ||||| || | | | |||||||| Sbjct 389978 GGAATACGCAACATCATGAAAGTATCGGCCAACCCTTGAACACCCAAAGCAATAGGTCTG 390037 Query 69130 TGTCTCTTATTTGAACTTT---CAGCTTCTGGAATAGGATAATAATTAATATCTATAATT 69186 |||||| | || || ||| ||| ||| || |||||||| ||| || || | | Sbjct 390038 TGTCTCATGTTGGATCTTCTGGCAGTTTC---AACGGGATAATAGTTACGGTCGATGACT 390094 Query 69187 TTATTAAGATTTCGGACTACTACTTTAACCACGTCCTTTAGTTTGAGAAAAT-----CA- 69240 | || | ||| ||| || || || | || | ||| || ||| | || Sbjct 390095 CTGTTCAAATTACGGGTGACAACCTTGGAAATTTCATGTAGCTTCTCAAAGTTGTACCAT 390154 Query 69241 --AATCGT-CCATCT--ATAA----CAAACA-TATT--CAGTGCTACAGATGCTAGATTA 69288 | || | || ||| | || ||| | | | || ||| ||||| || | ||| Sbjct 390155 TGAGTCTTTCCGTCTTCAGAAGTTTCAATGAATGCTGGCAATGCAACAGAAGCCAAGTTA 390214 Query 69289 CAAACTGC---TACCTCATTAGAATTTGCATATTGTATTATCTCTGTACATAGATTACTA 69345 || || || | |||| ||| | || | | || || ||| | ||| | Sbjct 390215 CACACGGCAGTTTCCTCTGGGGAA---GAGTACTCGACGATTTCACAACACAAGTTAGAA 390271 Query 69346 CATTTGATAGTCCCCAGATTTTGCTGATTACTCTTTTTGTTACAGGCGTCCTTGTAAAGA 69405 | ||||| || || || || | || ||| |||| ||||||| | || ||||||| Sbjct 390272 GACTTGATGGTACCAAGGTTCTTTTGGTTAGACTTTCTGTTACAAGAATCTTTGTAAATC 390331 Query 69406 ATAAACGGAGTACCAGTTTCAATCTGAGATTCGATAATAGATTTCCAAACGACCCTAGCA 69465 || || |||||||| ||||| |||||| ||| | ||| | | ||| | | ||| Sbjct 390332 ATGAATGGAGTACCGGTTTCCGTCTGAGCTTCTAGAATGGCATACCATAGCTTCTGAGCT 390391 Query 69466 TTTATTACGGTCTTG-TAACGCTTCTCTTTTTCA--TATTGTGTATATAGCCGTTCGAAT 69522 || || ||||| || | | | || || || || || ||||| ||||||| Sbjct 390392 TTGATA---GTCTTTCTACCACGGCCCTCTTGCACGTAACGTTCATATAAAGCTTCGAAT 390448 Query 69523 TCATCTCCCCAAACATCATCCAATCCAGGACATTCATTTGGACACATCAATGACCACACA 69582 ||||| || | ||||| | | || ||| |||| | || | | ||| | ||| || Sbjct 390449 TCATCACCATAGACATCGGCAAGACCGGGAGCTTCACTAGGGGAAAACAAGGTCCATTCA 390508 Query 69583 TCATCATCCTTAACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATAAAGAGATCT 69642 | | || | ||||| ||||| || | ||| |||| ||| ||||| || | |||| Sbjct 390509 CCGTTCTCTTGAACTCTCTTCATGAACAAATCTGGAACCCATAGAGCAGGGAACAAATCT 390568 Query 69643 CTGGTTCTATTTTCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCATAATATCA 69702 |||| | ||||||| || || ||||| | |||| ||| || | |||||| Sbjct 390569 CTGGCACGGATTTCTTCCTTACCGTGGTTTTTCCGGATGTCGACAAAGTCGAAGATATCA 390628 Query 69703 GAATGCCATGGTTCTAGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCCCTGATCT 69762 || ||||||||||||| || || || | | || |||| || || || || ||||| Sbjct 390629 GAGTGCCATGGTTCTAAGTAAATTGCAAAAGCACCTGGTCTCTTGTTGCCACCTTGATCA 390688 Query 69763 ATGTATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACCATTAGATTTACCA 69822 | ||| | |||||||| || || || | | ||| || ||||||||||| || |||| Sbjct 390689 ACGTAACGAGCAGTGTTGTTGTATACACGAACCATGGGGATAATACCATTCGAAGTACCG 390748 Query 69823 TTTGTTCCAGAAATATAACTTCCTCTTGCGCGAATATTACTAATAGATAGACCTATTCCT 69882 || || || | ||| || ||| | | ||||| || || | || || || Sbjct 390749 TTGGTACCTGCAATGTAGGAGCCTGTAGAACGAATGTTGTGGATGTGCAATCCGATACCG 390808 Query 69883 CCTGCCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATATACCCTCTATGCTA 69942 || || | || ||||| | ||||| |||||| || || || ||||| || ||| Sbjct 390809 CCCGCAGTCTTGGAGATCATGGCACATTCTTTCAAAGTATCGTAGATACCTTCGATGGAG 390868 Query 69943 TCATCTATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGTATAGTTCCCGCATTA 70002 || ||| ||||| | || |||||| |||||| ||| |||| ||| || || || Sbjct 390869 TCCTCTTTCATGGCTACCAGGAAACAGGAAGACATCTGAGGATGAGGAGTACCGGCGTTG 390928 Query 70003 AATAATGTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATTGTATGTTTCAATA 70062 ||||| || || |||||||||||||| || || ||| | |||||||| ||||| | Sbjct 390929 AATAACGTGGGCGATGCGTGAGTGAAATATCTTAGAGACATGAGATTGTAGGTTTCGAGC 390988 Query 70063 GCTGATTCTATATCCCACTGATGAATTCCTATCGCGACACGCATCAACATATGCTGAGGT 70122 || ||| || || | || || || | || |||||||| | || ||||||||| Sbjct 390989 ACTCTTTCGATGTCGCGGCCGTGGATACCGACGGCAACACGCATGATCAAATGCTGAGGA 391048 Query 70123 CGTTCTACCGTTTTATTATTTATTTTCAACAGGTATGATTTTTCCAGAGTTTTAAACCCA 70182 |||||| | |||| || || | | ||| || ||| || || || || ||| Sbjct 391049 CGTTCTGCGACTTTACCATCGATACGGAGTAAGTACGAACGTTCTAGGGTCTTGAAACCA 391108 Query 70183 AAATAGTTGTATGAAAAGTCTCTTTCGTAAATAATAACAGAATTTAGTTTATCCTTATAT 70242 |||||||||||| |||||||| ||||| | |||| |||| || || | ||| || | Sbjct 391109 AAATAGTTGTATTGGAAGTCTCTGTCGTAGACAATAGCAGAGTTGAGCTCATCTTTGTGC 391168 Query 70243 TTGGTAACTATATCCATAACAGTAGGT-GAGATAATCGGAGATCGTTTACCATTTTTAGG 70301 | | || || ||| ||| | | || || || || || | | ||||||||||| Sbjct 391169 TCCATGACAAT-TCCGTAAACTTCCTTGGAAATCATGGGCGAGTGAATTCCATTTTTAGG 391227 Query 70302 ATTAACATAGTTGAATAAATCTTCCATTACATCACTAAATAGtttttttGTTTCCTTGTG 70361 || ||||||| | | ||||| || || | ||| | || | |||| ||| || Sbjct 391228 GTTCACATAGTGGTACAAATCGCTCACCACCTGCGAAAACTGCTTGGTAGTTTGCTTATG 391287 Query 70362 TAAATTTGATATGGCTATTCTGGCTGCTAGAATAGCATAGTCAGGATG 70409 | || || || || | ||| || |||| | ||||||||||| || Sbjct 391288 CAGGTTGGAAATCGCAAGTCTAGCGGCTAACGTCGCATAGTCAGGGTG 391335 >seq1 Length=762788 Score = 129 bits (142), Expect = 8e-25 Identities = 538/840 (64%), Gaps = 32/840 (4%) Strand=Plus/Plus Query 39326 TTTTGGTATTCACCAACGCGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTT 39385 |||||||| ||| || | || ||||| || || || || || |||| || || ||| Sbjct 618925 TTTTGGTAGTCAGACACTCTCTTTTCGAAGAAGTTGGTCTTACCAGCCAAAGAAATGTTT 618984 Query 39386 TCCATGAAATCAAACGGATTAGTTGCATTATAtttttttttAAATCCTAATTCTGAAATC 39445 ||||| ||||| || || || || | || | | |||| | || | | | | Sbjct 618985 TCCATAAAATCGAATGGGTTCGTAACGTTGAAATACTTTTGATTGCCAAGAGCAACTAGC 619044 Query 39446 AATCTATCTGCAACAAATTCTATGTATGTTTTCATCATTTCACAATTCATTCCTATGAGT 39505 | ||| || ||||||||||| | ||| ||||| | || ||||| || | || Sbjct 619045 AGTCTGTCGGCAACAAATTCAACATATTGGTTCATTAGGTCGGCGTTCATACCAAGTAGG 619104 Query 39506 TTAACTGGTAGAGCCTCCGTTAGAAACTCT-TTTTCGATGTCTACGGCCTCTGTTATTAT 39564 |||||||| || || | | | | ||| |||||||| || || ||||| || || || Sbjct 619105 GACACTGGTAGGGCATCGATGAAATA-TCTCTTTTCGATTTCGACAGCCTCAGTAATGAT 619163 Query 39565 CGATGTTACTACCTCATCACTCGGTGGATG---------CAATAAATGTTTAAACATTAA 39615 || |||| || || ||||| | || || ||| | | Sbjct 619164 T-------CT--CTCAACAATCTTTGGATCAGGCTTGTTCTTCAAGTGCGCAAATAGAAG 619214 Query 39616 GCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAG 39675 || || || ||| || || ||||| ||||| | ||||| || ||||| || || || Sbjct 619215 ACATGCAAAATCAGTGTGAAGACCCTCGTCTCTGCAAATTAGCTCATTAGAGAACGTTAG 619274 Query 39676 TCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAA 39735 || ||||| | ||| ||| || ||||| || || || ||||| ||||| || ||||| Sbjct 619275 ACCGGGCATCAAACCTTTCTTCTTTAGCCAGAAAATAGCGGCAAAGGATCCGGAGAAGAA 619334 Query 39736 GATGCCTTCTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAA----CTTGTATCATTAT 39791 | ||||| || || ||||| || || | ||||||| | | | | | || | | Sbjct 619335 AACACCTTCCACGGCAGCAAAGGCGACCAATCTCTCTGCAAATAGGGCCTCT-TCGTCCT 619393 Query 39792 GTATCCA-CTTCTGTGCCCAATCAGCTTTCTTCTTTACACAAGGCATTGTTTCTATAGCA 39850 | ||||| || || ||||| || || |||| ||| | ||| || |||| || ||| Sbjct 619394 GGATCCATCTGATG-GCCCATTCGGCCTTCTCCTTGATCTGAGGAATATTTTCAATGGCA 619452 Query 39851 TTAAAGAGATAATGTTTTTCATCACTATCTTTAACATATGTATCTATTAACAGACTATAC 39910 || || || ||| | || | ||||| | || || || || | |||| || Sbjct 619453 TTGAATAGGAAATCGCTCTCCTTGGGGTCTTTGATGTAGGTGTCAATCAGCAGAGAGTAG 619512 Query 39911 ATTTCTGAATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTA 39970 | || || ||||||||||| ||| ||||| || |||||||| || | ||||| | Sbjct 619513 GTCTCGGAGTGGATGTTTTCCATCATGATCTGGAACCCGTAAAAGCACTTGGCTTCTGGG 619572 Query 39971 ATTTGTACCTCTGAACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCATCACTAGCG 40030 ||||| || || | | || | || |||| || || || || || || || || Sbjct 619573 ATTTGAACTTCGGCTGAGAAGTTCTCGACCAAGTTCTCGTTGACAATACCGTCGGACGCA 619632 Query 40031 GCAAAAAATGCCAATACATGTTTAATAAAATATTTTTCAT-CGGGTGTCA---ATTTATT 40086 ||||| |||||||| ||| | | || | ||| | | || ||| || || Sbjct 619633 GCAAAGAATGCCAACACACGCGAGAGGAAGAAACGTTCGTGCTCGT-TCATGCGGTTGTT 619691 Query 40087 CCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAACGACGCCTCTGC 40146 |||||| | ||||| || || | ||| | || || || ||||| ||||||||||| || Sbjct 619692 CCAGTCGTGAATATCCTTGGACAAATCGATCTCCTCGGCGGTCCAGAACGACGCCTCAGC 619751 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686908731309120