Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lachancea_20fermentati_20[genbank_20GCA_5F900074765.1_202016-10-26]
8 sequences; 10,264,457 total letters
Query= NC_027778.1
Length=124244
Score E
Sequences producing significant alignments: (Bits) Value
seq1 149 5e-31
seq7 100 2e-16
>seq1
Length=762788
Score = 149 bits (164), Expect = 5e-31
Identities = 278/403 (69%), Gaps = 13/403 (3%)
Strand=Plus/Minus
Query 43850 GTTTTGGCGTTTTTTGCTGCGAGCGACGGGATAGTCAATGAAAATTTGGTT-AGTCGGTT 43908
|| ||||| || ||||||||| |||||| || ||||| || || ||||| || |
Sbjct 619649 GTGTTGGCATTCTTTGCTGCGTCCGACGGTATTGTCAACGAGAACTTGGTCGAGAACTTC 619590
Query 43909 TGCGCAAGAAGTTCAATTACCAGAAGCACGATGTTTTTATGGGTTTCAAATTGCCATAGA 43968
| || ||||||||| | |||||||| || ||||| ||||| || || || ||
Sbjct 619589 TCAGCC-GAAGTTCAAATCCCAGAAGCCAAGTGCTTTTACGGGTTCCAGATCATGATGGA 619531
Query 43969 AAATATTCATTCGGAAATGTACAGTCTTCTGATAGATACGTACATCAAAGATGGGCACGA 44028
||| || || || || | ||| ||| ||||| || || ||||||||||| | | |
Sbjct 619530 AAACATCCACTCCGAGACCTACTCTCTGCTGATTGACACCTACATCAAAGAC---CCCAA 619474
Query 44029 GAAGCATCGATTG----TTTAATGCGATAGAAACAGTACCTGCGATTAAACATAAAGCAG 44084
| || | ||||| || ||||| || |||| | ||| ||| || | || || |
Sbjct 619473 GGAG-AGCGATTTCCTATTCAATGCCATTGAAAATATTCCTCAGATCAAGGAGAAGGCCG 619415
Query 44085 ACTGGGCCCTTAAATGGATAAATTCAAATGATTCT---TTTGGAGAACGACTTGTCGCGT 44141
| |||||| | | |||||| | | || | |||| ||| || | ||||| |
Sbjct 619414 AATGGGCCATCAGATGGATCCAGGACGAAGAGGCCCTATTTGCAGAGAGATTGGTCGCCT 619355
Query 44142 TTGCAGTTGTGGAAGGCATTTTCTTTTCAGGATCGTTTGCGGCCATATTTTGGTTAAAGA 44201
|||| | |||||||| ||||||| || ||||| ||||| || || || ||| ||||||
Sbjct 619354 TTGCTGCCGTGGAAGGTGTTTTCTTCTCCGGATCCTTTGCCGCTATTTTCTGGCTAAAGA 619295
Query 44202 AACGAGGTTTGATGCCTGGGTTGACGTTTTCAAATGAGTTAAT 44244
| |||||||||||| || | ||||| || |||||| ||||
Sbjct 619294 AGAAAGGTTTGATGCCCGGTCTAACGTTCTCTAATGAGCTAAT 619252
>seq7
Length=1626734
Score = 100 bits (110), Expect = 2e-16
Identities = 271/411 (66%), Gaps = 8/411 (2%)
Strand=Plus/Minus
Query 19429 CCCAAAATTGTAAATGGTCCTGAAATCTTAAATAAATATGTAGGTCAATCGGAAGAAAAT 19488
|| || |||||||| ||||| ||||| || | ||||| || || || ||||| |||
Sbjct 1317242 CCTAAGATTGTAAACGGTCCAGAAATTTTGAGCAAATACGTTGGCTCTTCAGAAGAGAAT 1317183
Query 19489 GTACGACGTTTGTTTGCTGACGCTGAAGAAGAACAAAAACGTTTAGGGCGCAAAAG-TTC 19547
| || | | || || || |||| |||| | || | |||| | | || |||
Sbjct 1317182 ATCCGTAATCTTTTCAAGGATGCAGAAGCAGAATACAAG-GCGAAGGGTGAAGAATCTTC 1317124
Query 19548 TTTGCACATTATAATACTAGATGAATTGGACGCAATCTGTAAGCAAAGAGGTTCT---GG 19604
| ||||||| || || | |||||||||||| | | | || || ||||| ||| ||
Sbjct 1317123 TCTGCACATCATTATCTTCGATGAATTGGACTCTGTATTCAAACAGAGAGGCTCTAGGGG 1317064
Query 19605 T---GTAAATGGAGTACATGACACTGTTGTCAATCAACTCCTGTCAAAATTAGACGGTGT 19661
| | || || || ||| | |||||| |||||| | || | ||| | || |||||
Sbjct 1317063 TGACGGAACCGGTGTTGGTGATAATGTTGTTAATCAATTATTGGCCAAAATGGATGGTGT 1317004
Query 19662 TAACCAACTGAATAATATTTTAGTTATTGGCATGACTAATAGACTGGAATTAATAGACAG 19721
| | ||||| || || |||||||| ||||| ||||| || | ||| | || |||||
Sbjct 1317003 TGATCAACTCAACAACATTTTAGTAATTGGTATGACAAACCGTAGGGATCTTATTGACAG 1316944
Query 19722 CGCCTTATTACGACCCGGTCGGTTGGAAATAAAGATCGAAATTAACTTACCCGATGAATG 19781
|| || | || ||||| | || || | | | || ||| | ||||| ||||||
Sbjct 1316943 TGCATTGCTGCGTCCCGGAAGATTTGAGGTGCAAGTTGAGATTCAATTACCAGATGAACA 1316884
Query 19782 TGGACGTGTGGAAATTTTAAACATACATACATCAACCATGCGACAAAATAA 19832
|| | || ||||||| | || || || | ||| || |||||||
Sbjct 1316883 AGGCAGAGTTCAAATTTTTGAGATTCAAACCAAGAAAATGAGAGAAAATAA 1316833
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397455961248040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |