Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lachancea_20fermentati_20[genbank_20GCA_5F900074765.1_202016-10-26] 8 sequences; 10,264,457 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq2 95.1 1e-14 seq4 93.3 4e-14 >seq2 Length=1086951 Score = 95.1 bits (104), Expect = 1e-14 Identities = 294/450 (65%), Gaps = 9/450 (2%) Strand=Plus/Plus Query 131636 CCGTTCTGTTCAACTCGCTTCATAAACAAATCCGGCACCCATAACGCGTACAACAGATCT 131695 ||||||| || ||||| |||||| |||||||| || ||||||| || |||| |||| Sbjct 390509 CCGTTCTCTTGAACTCTCTTCATGAACAAATCTGGAACCCATAGAGCAGGGAACAAATCT 390568 Query 131696 CTAGCTTTTTTCTCTTCTGTACCCATAAtttttttCAAATTT--AAAAAGTCCAAAATGT 131753 || || | ||||| |||| ||||| | || | | |||||| || || | Sbjct 390569 CTGGCACGGATTTCTTCCTTACCGTGG--TTTTTCCGGATGTCGACAAAGTCGAAGATAT 390626 Query 131754 CCGCATGCCAGGGTTCCAAATACACTGCCATTGCGCCTTTGCGCTTA---CCGCCTTGAT 131810 | | ||||| ||||| || || | ||| | || ||| | ||| || ||||||| Sbjct 390627 CAGAGTGCCATGGTTCTAAGTAAATTGCAAAAGCACCTGGTCTCTTGTTGCCACCTTGAT 390686 Query 131811 TAACATGACGAACCATGTTGTTGTATACGCGCAACATGGGCTCCAAACCGTTGGCGTTTC 131870 ||| | |||| | ||||||||||||| || | |||||| | ||| || | | | Sbjct 390687 CAACGTAACGAGCAGTGTTGTTGTATACACGAACCATGGGGATAATACCATTCGAAGTAC 390746 Query 131871 CATTGGTGCTCTTAATGTAGCTGCCATTGGCTCTGATTTTGTGAACGTTGAGTCCAATAC 131930 | ||||| | ||||||| ||| | | | || ||||| | || | ||| |||| Sbjct 390747 CGTTGGTACCTGCAATGTAGGAGCCTGTAGAACGAATGTTGTGGATGTGCAATCCGATAC 390806 Query 131931 C-TCCGCCGTATTTAGAGATTAGTGCGCATTTGGTTAGAGTGTTATAGATACCTTCCACG 131989 | |||| || || ||||| | || |||| | | ||| | ||||||||||| | | Sbjct 390807 CGCCCGCAGT-CTTGGAGATCATGGCACATTCTTTCAAAGTATCGTAGATACCTTCGATG 390865 Query 131990 CTGTCCGCGGCAATGTCGACTAAAAAGCAAGAGGACAACTGTTGGTGAAATGTGCCGGCT 132049 |||| | ||| | || | || || || |||| ||| | ||| || ||||| Sbjct 390866 GAGTCCTCTTTCATGGCTACCAGGAAACAGGAAGACATCTGAGGATGAGGAGTACCGGCG 390925 Query 132050 GAAAACAATGTGGGGCTGGCGTGTGTAAAA 132079 || || ||||| ||||| || ||| Sbjct 390926 TTGAATAACGTGGGCGATGCGTGAGTGAAA 390955 >seq4 Length=1192607 Score = 93.3 bits (102), Expect = 4e-14 Identities = 151/215 (70%), Gaps = 2/215 (1%) Strand=Plus/Minus Query 27035 CAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTC-GCTCATGTTGCGCTCGT 27093 ||| ||||||||||| ||||| || |||||||| |||||||| | ||| || | | Sbjct 499515 CAAAACCAAATGTAAAGTAGACTCCTTTTGAATGTTGTAGTCAGAAAGCGTTCTGC-CAT 499457 Query 27094 CTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTAT 27153 | || | || ||||||||| |||| | | ||||| || || || | ||| || || | Sbjct 499456 CCTCCAATTGCTTACCGGCGAAAATCAATCTTTGTTGGTCTGGTGGAATACCTTCCTTGT 499397 Query 27154 CGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAG 27213 | |||||| ||| | | | |||| ||||| | | ||||| || | ||| |||| Sbjct 499396 CTTGAATCTTGGATTTGACGTTGTCTATCGTGTCAGAAGACTCAACCTCCAAAGTAATAG 499337 Query 27214 ATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || || || ||||| || || ||||| |||||| Sbjct 499336 TCTTACCGGTTAGAGTCTTGACGAAGATCTGCATA 499302 Score = 91.5 bits (100), Expect = 1e-13 Identities = 152/217 (70%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 27032 CCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTC-GCTCATGTTGCGCT 27090 || ||| |||| ||||| ||||| || |||||||||||||| || | ||| || Sbjct 498834 CCTCAAAACCAGGTGTAAGGTAGATTCCTTTTGAATATTGTAATCAGAAAGAGTTCTGC- 498776 Query 27091 CGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTT 27150 | || || | ||| ||||| ||| |||| | | |||||||| || || | ||| || | Sbjct 498775 CATCCTCCAACTGCTTACCAGCGAAAATCAATCTTTGTTGATCAGGTGGAATACCTTCCT 498716 Query 27151 TATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTA 27210 |||| ||||||| ||| | | | || | || || | || |||||| || ||||| | Sbjct 498715 TATCCTGGATCTTGGATTTGACGTTGTCGATGGTATCAGAGGATTCAACCTCCAGAGTGA 498656 Query 27211 TAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 | | ||||| || | ||| || || || || ||||| Sbjct 498655 TGGTCTTGCCGGTTAAAGTCTTGACGAAAATCTGCAT 498619 Score = 87.8 bits (96), Expect = 2e-12 Identities = 150/215 (70%), Gaps = 2/215 (1%) Strand=Plus/Minus Query 27035 CAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTC-GCTCATGTTGCGCTCGT 27093 ||| ||||||||||| ||||| || ||||| || |||||||| | ||| || | | Sbjct 499059 CAAAACCAAATGTAAAGTAGACTCCTTTTGGATGTTGTAGTCAGAAAGCGTTCTGC-CAT 499001 Query 27094 CTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTAT 27153 | || | ||| ||||| ||| |||| || | || || || || || | ||| || |||| Sbjct 499000 CCTCCAACTGCTTACCAGCGAAAATCAGTCTTTGCTGGTCAGGTGGAATACCTTCCTTAT 498941 Query 27154 CGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAG 27213 | ||||||| ||| | | | || | || || | || ||| ||||| | || || | Sbjct 498940 CCTGGATCTTGGATTTAACGTTGTCGATGGTATCAGAGGATTCGACTTCCAAGGTGATGG 498881 Query 27214 ATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || || || ||||| || || ||||| |||||| Sbjct 498880 TCTTACCGGTTAGAGTCTTGACGAAGATCTGCATA 498846 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424934358568896