Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lachancea_20fermentati_20[genbank_20GCA_5F900074765.1_202016-10-26]
8 sequences; 10,264,457 total letters
Query= NC_027923.1
Length=132831
Score E
Sequences producing significant alignments: (Bits) Value
seq2 95.1 1e-14
seq4 93.3 4e-14
>seq2
Length=1086951
Score = 95.1 bits (104), Expect = 1e-14
Identities = 294/450 (65%), Gaps = 9/450 (2%)
Strand=Plus/Plus
Query 131636 CCGTTCTGTTCAACTCGCTTCATAAACAAATCCGGCACCCATAACGCGTACAACAGATCT 131695
||||||| || ||||| |||||| |||||||| || ||||||| || |||| ||||
Sbjct 390509 CCGTTCTCTTGAACTCTCTTCATGAACAAATCTGGAACCCATAGAGCAGGGAACAAATCT 390568
Query 131696 CTAGCTTTTTTCTCTTCTGTACCCATAAtttttttCAAATTT--AAAAAGTCCAAAATGT 131753
|| || | ||||| |||| ||||| | || | | |||||| || || |
Sbjct 390569 CTGGCACGGATTTCTTCCTTACCGTGG--TTTTTCCGGATGTCGACAAAGTCGAAGATAT 390626
Query 131754 CCGCATGCCAGGGTTCCAAATACACTGCCATTGCGCCTTTGCGCTTA---CCGCCTTGAT 131810
| | ||||| ||||| || || | ||| | || ||| | ||| || |||||||
Sbjct 390627 CAGAGTGCCATGGTTCTAAGTAAATTGCAAAAGCACCTGGTCTCTTGTTGCCACCTTGAT 390686
Query 131811 TAACATGACGAACCATGTTGTTGTATACGCGCAACATGGGCTCCAAACCGTTGGCGTTTC 131870
||| | |||| | ||||||||||||| || | |||||| | ||| || | | |
Sbjct 390687 CAACGTAACGAGCAGTGTTGTTGTATACACGAACCATGGGGATAATACCATTCGAAGTAC 390746
Query 131871 CATTGGTGCTCTTAATGTAGCTGCCATTGGCTCTGATTTTGTGAACGTTGAGTCCAATAC 131930
| ||||| | ||||||| ||| | | | || ||||| | || | ||| ||||
Sbjct 390747 CGTTGGTACCTGCAATGTAGGAGCCTGTAGAACGAATGTTGTGGATGTGCAATCCGATAC 390806
Query 131931 C-TCCGCCGTATTTAGAGATTAGTGCGCATTTGGTTAGAGTGTTATAGATACCTTCCACG 131989
| |||| || || ||||| | || |||| | | ||| | ||||||||||| | |
Sbjct 390807 CGCCCGCAGT-CTTGGAGATCATGGCACATTCTTTCAAAGTATCGTAGATACCTTCGATG 390865
Query 131990 CTGTCCGCGGCAATGTCGACTAAAAAGCAAGAGGACAACTGTTGGTGAAATGTGCCGGCT 132049
|||| | ||| | || | || || || |||| ||| | ||| || |||||
Sbjct 390866 GAGTCCTCTTTCATGGCTACCAGGAAACAGGAAGACATCTGAGGATGAGGAGTACCGGCG 390925
Query 132050 GAAAACAATGTGGGGCTGGCGTGTGTAAAA 132079
|| || ||||| ||||| || |||
Sbjct 390926 TTGAATAACGTGGGCGATGCGTGAGTGAAA 390955
>seq4
Length=1192607
Score = 93.3 bits (102), Expect = 4e-14
Identities = 151/215 (70%), Gaps = 2/215 (1%)
Strand=Plus/Minus
Query 27035 CAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTC-GCTCATGTTGCGCTCGT 27093
||| ||||||||||| ||||| || |||||||| |||||||| | ||| || | |
Sbjct 499515 CAAAACCAAATGTAAAGTAGACTCCTTTTGAATGTTGTAGTCAGAAAGCGTTCTGC-CAT 499457
Query 27094 CTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTAT 27153
| || | || ||||||||| |||| | | ||||| || || || | ||| || || |
Sbjct 499456 CCTCCAATTGCTTACCGGCGAAAATCAATCTTTGTTGGTCTGGTGGAATACCTTCCTTGT 499397
Query 27154 CGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAG 27213
| |||||| ||| | | | |||| ||||| | | ||||| || | ||| ||||
Sbjct 499396 CTTGAATCTTGGATTTGACGTTGTCTATCGTGTCAGAAGACTCAACCTCCAAAGTAATAG 499337
Query 27214 ATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248
|| || || ||||| || || ||||| ||||||
Sbjct 499336 TCTTACCGGTTAGAGTCTTGACGAAGATCTGCATA 499302
Score = 91.5 bits (100), Expect = 1e-13
Identities = 152/217 (70%), Gaps = 2/217 (1%)
Strand=Plus/Minus
Query 27032 CCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTC-GCTCATGTTGCGCT 27090
|| ||| |||| ||||| ||||| || |||||||||||||| || | ||| ||
Sbjct 498834 CCTCAAAACCAGGTGTAAGGTAGATTCCTTTTGAATATTGTAATCAGAAAGAGTTCTGC- 498776
Query 27091 CGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTT 27150
| || || | ||| ||||| ||| |||| | | |||||||| || || | ||| || |
Sbjct 498775 CATCCTCCAACTGCTTACCAGCGAAAATCAATCTTTGTTGATCAGGTGGAATACCTTCCT 498716
Query 27151 TATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTA 27210
|||| ||||||| ||| | | | || | || || | || |||||| || ||||| |
Sbjct 498715 TATCCTGGATCTTGGATTTGACGTTGTCGATGGTATCAGAGGATTCAACCTCCAGAGTGA 498656
Query 27211 TAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247
| | ||||| || | ||| || || || || |||||
Sbjct 498655 TGGTCTTGCCGGTTAAAGTCTTGACGAAAATCTGCAT 498619
Score = 87.8 bits (96), Expect = 2e-12
Identities = 150/215 (70%), Gaps = 2/215 (1%)
Strand=Plus/Minus
Query 27035 CAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTC-GCTCATGTTGCGCTCGT 27093
||| ||||||||||| ||||| || ||||| || |||||||| | ||| || | |
Sbjct 499059 CAAAACCAAATGTAAAGTAGACTCCTTTTGGATGTTGTAGTCAGAAAGCGTTCTGC-CAT 499001
Query 27094 CTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTAT 27153
| || | ||| ||||| ||| |||| || | || || || || || | ||| || ||||
Sbjct 499000 CCTCCAACTGCTTACCAGCGAAAATCAGTCTTTGCTGGTCAGGTGGAATACCTTCCTTAT 498941
Query 27154 CGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAG 27213
| ||||||| ||| | | | || | || || | || ||| ||||| | || || |
Sbjct 498940 CCTGGATCTTGGATTTAACGTTGTCGATGGTATCAGAGGATTCGACTTCCAAGGTGATGG 498881
Query 27214 ATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248
|| || || ||||| || || ||||| ||||||
Sbjct 498880 TCTTACCGGTTAGAGTCTTGACGAAGATCTGCATA 498846
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 424934358568896
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |