Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lachancea_20fermentati_20[genbank_20GCA_5F900074765.1_202016-10-26] 8 sequences; 10,264,457 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq2 271 1e-67 seq1 87.8 2e-12 seq5 86.0 8e-12 >seq2 Length=1086951 Score = 271 bits (300), Expect = 1e-67 Identities = 911/1395 (65%), Gaps = 41/1395 (3%) Strand=Plus/Plus Query 110707 GTAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGA 110766 ||| ||||||| || |||||||| || ||||| || | ||||||||| || | || || Sbjct 389656 GTACATGTTTGAGGTATATGGTTCGAAACATTCGTTGTAACCCAAGATCTGGGAAGTAGA 389715 Query 110767 GGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTCTCCTTGATGCGTTC 110826 ||| ||||||||||| || | ||| ||| ||| | || ||| | | | ||| | | Sbjct 389716 GGCAGTTGGCATTGGGGCTAGCAACAGAGAGTTTCTAATACCGTCTTTGATAATGTCTGC 389775 Query 110827 CTTGAGAACATCCCAGTCG--TAGTTGAGCTTGGTTTCACCTTCCCACATGTCAAACTGA 110884 | | | ||||| || ||| | || | ||| || | ||||||||||||| ||| Sbjct 389776 TCTCAAAGTTTCCCAATCCCATAGATCAG-TAGGTGTC-CTGCCCCACATGTCAAATTGA 389833 Query 110885 AGCACCCCTTGGGACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTCA--- 110941 || | || | || || || || |||| || || || || | || | |||| Sbjct 389834 AGAATACCCTCGGCAGCAGGGGATCCCTTGAATGTCTCGTATGGGCCCT---CTTCCAGG 389890 Query 110942 GCCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTC 111001 ||||| || ||||| |||| ||||||||||| || ||||||| || |||| Sbjct 389891 GCCAACTCGTGTGATGCCTCTAGGGCAGCGTGATACATAGTCTCAAAGACGTGAATATTC 389950 Query 111002 ATCTCCTTGGCTTCATCTGAATC-AAATGCGTAGCGGCACAAAATAAATACATCCGCGAG 111060 | || ||||| || | || || ||| | || || ||| || || ||| || | Sbjct 389951 AATTCTTTGGCCTCCTGAGAGTCGAAAGGAATA-CGCAACATCATGAAAGTATCGGCCAA 390009 Query 111061 ACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCAAC 111120 ||||||||||||||| ||||||||||||||| ||| || || ||| ||||| ||||| Sbjct 390010 CCCTTGAACACCCAAAGCAATAGGTCTGTGTCTCATGTTGGATCTTCTGGCAGTTTCAAC 390069 Query 111121 GGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTC 111180 ||||||| | || | ||| ||||||| ||| | ||| ||| |||| ||| | ||||| Sbjct 390070 GGGATAATAGTTACGGTCGATGACTCTGTTCAAATTACGGGTGACAACCTTGGAAATTTC 390129 Query 111181 ATGAAGTTTTTCATAATCAAAAGTGCGAGTC------TCTTCA----TTGACAT--ACTT 111228 ||| || || ||| | | | ||||| |||||| || || | Sbjct 390130 ATGTAGCTTCTCAAAGTTGTACCATTGAGTCTTTCCGTCTTCAGAAGTTTCAATGAATGC 390189 Query 111229 TGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAA 111288 ||| | || | || ||||| || || || || || || || | |||||| | Sbjct 390190 TGGCAATGCAACAGAAGCCAAGTTACACACGGCAGTTTCCTCTGGGGAAGAGTACTCGAC 390249 Query 111289 AATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTT 111348 ||||| ||| ||||| ||| ||| || || || | |||||||||||| ||| | Sbjct 390250 GATTTCACAACACAAGTTAGAAGACTTGATGGTACCAAGGTTCTTTTGGTTAGACTTTCT 390309 Query 111349 GTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAAT 111408 ||| || | ||| ||||| | |||| | || || || || |||||||| | || ||||| Sbjct 390310 GTTACAAGAATCTTTGTAAATCATGAATGGAGTACCGGTTTCCGTCTGAGCTTCTAGAAT 390369 Query 111409 AGCCTTCCA-AACATCGGCGGCTGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACT 111467 || | ||| | | || | ||| | | | | | || ||||| | |||| Sbjct 390370 GGCATACCATAGCTTCTG-AGCTTTGATAGTCTTTCTACCACGGCCCTCTTGCACGTAAC 390428 Query 111468 TTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCT- 111526 | || | ||||| || || ||||| | |||| ||||| || | ||| || Sbjct 390429 GTTCATATAAAGCTTCGAATTCATCACCATAGACATCGGCAAGACCGGGAG-CTTCACTA 390487 Query 111527 GGACAGAAAAGAGACCATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATC 111586 || | || | | ||||| ||| || | ||| | ||||||||| | ||||||| | Sbjct 390488 GGGGAAAACAAGGTCCATTCACCGTTCTCTTGAACTCTCTTCATGAACAAATCTGGAACC 390547 Query 111587 CACAGGGATGAAAAGAGATCTCT-ACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAA 111645 || || | | || | |||||| ||| || ||||| | ||| ||||| || | Sbjct 390548 CATAGAGCAGGGAACAAATCTCTGGCACGGA-TTTCTTCCTTACCGTGGTTTTTCCGGAT 390606 Query 111646 CTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCC--- 111702 || | || || | |||||| | ||||||||| || | || | ||| | || || Sbjct 390607 GTCGACAAAGTCGAAGATATCAGAGTGCCATGGTTCTAAGTAAATTGCAAAAGCACCTGG 390666 Query 111703 -CTTTCGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTG 111761 || | | | ||| |||||| || || || || ||| ||| |||| |||| ||| | Sbjct 390667 TCTCTTGTTG-CCACCTTGATCAACGTAACGAGCAGTGTTGTTGTATACACGAACCATGG 390725 Query 111762 GAATAATACCATCTGATTGACCATTTGTCCCCCGAA--TACGAGATTTATTGGCTCTCAC 111819 | |||||||||| || ||| || || || || || ||| | | | | | Sbjct 390726 GGATAATACCATTCGAAGTACCGTTGGTACCTGCAATGTAGGAGCCT--GTAGAACGAAT 390783 Query 111820 ATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAG 111879 | |||||||||| || ||||| || || ||| ||||| ||||| || | | Sbjct 390784 GTTGTGGATGTGCAATCCGATACCGCCCGCAGTCTTGGAGATCATGGCACATTCTTTCAA 390843 Query 111880 AGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACAT 111939 ||| | |||||||| | ||| |||||||| || |||| | ||||| || ||||| Sbjct 390844 AGTATCGTAGATACCTTCGATGGAGTCCTCTTTCATGGCTACCAGGAAACAGGAAGACAT 390903 Query 111940 CTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTT- 111998 ||| || || ||||| || ||||| | || || | ||||||| |||| ||| ||| Sbjct 390904 CTGAGGATGAGGAGTACCGGCGTTGAATAACGTGGGCGATGCGTGAGTGAA-ATATCTTA 390962 Query 111999 GGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTG 112058 | ||||| | ||| || || | || || ||||| |||||||| |||| | Sbjct 390963 GAGACATGAGATTGTAGGTTTCGAGCACTCTTTCGATGTCGCGGCCGTGGATACCGACGG 391022 Query 112059 CGACCCGCATGAACA 112073 | || ||||||| || Sbjct 391023 CAACACGCATGATCA 391037 >seq1 Length=762788 Score = 87.8 bits (96), Expect = 2e-12 Identities = 96/128 (75%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 122659 GCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCT 122718 ||||| || ||| |||||||| |||| | |||| || ||||| ||||| |||||| Sbjct 619219 GCAAAATCAGTGTGAAGACCCTCGTCTCTGCAAATTAGCTCATTAGAGAACGTTAGACCG 619278 Query 122719 GGCATGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATA 122778 ||||| | ||| |||||| | ||| |||||||| || || ||||||||||| | | Sbjct 619279 GGCATCAAACCTTTCTTCTTTAGCCAGAAAATAGCGGCAAAGGATCCGGAGAAGAAAACA 619338 Query 122779 CCCTCCAC 122786 || ||||| Sbjct 619339 CCTTCCAC 619346 >seq5 Length=1346284 Score = 86.0 bits (94), Expect = 8e-12 Identities = 285/441 (65%), Gaps = 8/441 (2%) Strand=Plus/Plus Query 181586 GATATCCTTGGGGTTGAATGGTGGTACATAGCAACTGAAACCCGTACCGATACCCTCGGT 181645 ||| ||| | || | ||| ||||| | || || |||| || || || || || | Sbjct 1115655 GATGTCCATAGGATGGAAGGGTGGAATATTTGTGCTCCAACCAGTTCCTATGCCTTCAGC 1115714 Query 181646 TCCATTCACGAGAACCATTGGTAAAGTTGGCATGTAAAAGTCTGGTTCAATGGAGCGTCC 181705 |||||| || | |||||| |||| ||| | || | || ||||| || | | | Sbjct 1115715 TCCATTGACCAAAACCATAGGTATGACTGGTAGATACCATTCGGGTTCTATTGTTTGATC 1115774 Query 181706 ATCATCGTCCAAGTAGTTGAGGATCGGGTCATCCCGAGGATCAAAGATCTTGCGAGCCTC 181765 |||||| | || || || || | || | ||| |||| | || || |||| Sbjct 1115775 ATCATCCTGTAAATAATTTAGCAAAGGATTATCAAGAGGGTTGAATATGAAACGAGTTAT 1115834 Query 181766 CTTGGTAAGTTTTGTGAAGATATACCTCGTTTGAGAAGCGTCTTTACCACCCATGAGACG 181825 ||| | |||| || ||| ||||| || || | |||||||| |||| || Sbjct 1115835 CTTATTGAGTTCAGTATTGATGTACCTTGTAGCAGCCGAATCTTTACCGCCCACAGCTCG 1115894 Query 181826 CGTACCAAATTGACCACATGGCTCAAGAAGGTTAATGTTGTTTGAACCTGTATAGTCGTT 181885 |||||||| |||| ||||| | ||||||||||||||| || ||| || |||| | Sbjct 1115895 AGTACCAAAAGCACCATTTGGCTTTAAAAGGTTAATGTTGTTGGATCCTATAAAGTCTTG 1115954 Query 181886 GGCCAACTTAACGATGGTATCCGCAAGGGACACTTCACCGTGGTGGTAAGCTGACTTGTC 181945 |||| ||| || || | || || ||| ||||||| || || ||| | | | || Sbjct 1115955 CGCCATTCCAACAATAGTTTGAGCGAGAGACTCTTCACCATGATGATAACCGGTGTGCTC 1116014 Query 181946 CGCAACATATGCCGCCAA----CTGTGCCACCTTCATTTCATCTTTGAGGTTCTTGTGGA 182001 || | |||| | |||| ||| || || || || ||| |||| | ||| | | || Sbjct 1116015 CG--AGATATAC--CCAATTAGCTGCGCAACTTTAATCTCACCTTTCAAATTCCTTTTGA 1116070 Query 182002 AGCAAGCATACATCACTTTCC 182022 | ||| |||| | ||||||| Sbjct 1116071 AACAACCATATAAAACTTTCC 1116091 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628031937196800