Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lachancea_20fermentati_20[genbank_20GCA_5F900074765.1_202016-10-26]
8 sequences; 10,264,457 total letters
Query= NC_028091.1
Length=196300
Score E
Sequences producing significant alignments: (Bits) Value
seq2 271 1e-67
seq1 87.8 2e-12
seq5 86.0 8e-12
>seq2
Length=1086951
Score = 271 bits (300), Expect = 1e-67
Identities = 911/1395 (65%), Gaps = 41/1395 (3%)
Strand=Plus/Plus
Query 110707 GTAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGA 110766
||| ||||||| || |||||||| || ||||| || | ||||||||| || | || ||
Sbjct 389656 GTACATGTTTGAGGTATATGGTTCGAAACATTCGTTGTAACCCAAGATCTGGGAAGTAGA 389715
Query 110767 GGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTCTCCTTGATGCGTTC 110826
||| ||||||||||| || | ||| ||| ||| | || ||| | | | ||| | |
Sbjct 389716 GGCAGTTGGCATTGGGGCTAGCAACAGAGAGTTTCTAATACCGTCTTTGATAATGTCTGC 389775
Query 110827 CTTGAGAACATCCCAGTCG--TAGTTGAGCTTGGTTTCACCTTCCCACATGTCAAACTGA 110884
| | | ||||| || ||| | || | ||| || | ||||||||||||| |||
Sbjct 389776 TCTCAAAGTTTCCCAATCCCATAGATCAG-TAGGTGTC-CTGCCCCACATGTCAAATTGA 389833
Query 110885 AGCACCCCTTGGGACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTCA--- 110941
|| | || | || || || || |||| || || || || | || | ||||
Sbjct 389834 AGAATACCCTCGGCAGCAGGGGATCCCTTGAATGTCTCGTATGGGCCCT---CTTCCAGG 389890
Query 110942 GCCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTC 111001
||||| || ||||| |||| ||||||||||| || ||||||| || ||||
Sbjct 389891 GCCAACTCGTGTGATGCCTCTAGGGCAGCGTGATACATAGTCTCAAAGACGTGAATATTC 389950
Query 111002 ATCTCCTTGGCTTCATCTGAATC-AAATGCGTAGCGGCACAAAATAAATACATCCGCGAG 111060
| || ||||| || | || || ||| | || || ||| || || ||| || |
Sbjct 389951 AATTCTTTGGCCTCCTGAGAGTCGAAAGGAATA-CGCAACATCATGAAAGTATCGGCCAA 390009
Query 111061 ACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCAAC 111120
||||||||||||||| ||||||||||||||| ||| || || ||| ||||| |||||
Sbjct 390010 CCCTTGAACACCCAAAGCAATAGGTCTGTGTCTCATGTTGGATCTTCTGGCAGTTTCAAC 390069
Query 111121 GGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTC 111180
||||||| | || | ||| ||||||| ||| | ||| ||| |||| ||| | |||||
Sbjct 390070 GGGATAATAGTTACGGTCGATGACTCTGTTCAAATTACGGGTGACAACCTTGGAAATTTC 390129
Query 111181 ATGAAGTTTTTCATAATCAAAAGTGCGAGTC------TCTTCA----TTGACAT--ACTT 111228
||| || || ||| | | | ||||| |||||| || || |
Sbjct 390130 ATGTAGCTTCTCAAAGTTGTACCATTGAGTCTTTCCGTCTTCAGAAGTTTCAATGAATGC 390189
Query 111229 TGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAA 111288
||| | || | || ||||| || || || || || || || | |||||| |
Sbjct 390190 TGGCAATGCAACAGAAGCCAAGTTACACACGGCAGTTTCCTCTGGGGAAGAGTACTCGAC 390249
Query 111289 AATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTT 111348
||||| ||| ||||| ||| ||| || || || | |||||||||||| ||| |
Sbjct 390250 GATTTCACAACACAAGTTAGAAGACTTGATGGTACCAAGGTTCTTTTGGTTAGACTTTCT 390309
Query 111349 GTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAAT 111408
||| || | ||| ||||| | |||| | || || || || |||||||| | || |||||
Sbjct 390310 GTTACAAGAATCTTTGTAAATCATGAATGGAGTACCGGTTTCCGTCTGAGCTTCTAGAAT 390369
Query 111409 AGCCTTCCA-AACATCGGCGGCTGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACT 111467
|| | ||| | | || | ||| | | | | | || ||||| | ||||
Sbjct 390370 GGCATACCATAGCTTCTG-AGCTTTGATAGTCTTTCTACCACGGCCCTCTTGCACGTAAC 390428
Query 111468 TTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCT- 111526
| || | ||||| || || ||||| | |||| ||||| || | ||| ||
Sbjct 390429 GTTCATATAAAGCTTCGAATTCATCACCATAGACATCGGCAAGACCGGGAG-CTTCACTA 390487
Query 111527 GGACAGAAAAGAGACCATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATC 111586
|| | || | | ||||| ||| || | ||| | ||||||||| | ||||||| |
Sbjct 390488 GGGGAAAACAAGGTCCATTCACCGTTCTCTTGAACTCTCTTCATGAACAAATCTGGAACC 390547
Query 111587 CACAGGGATGAAAAGAGATCTCT-ACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAA 111645
|| || | | || | |||||| ||| || ||||| | ||| ||||| || |
Sbjct 390548 CATAGAGCAGGGAACAAATCTCTGGCACGGA-TTTCTTCCTTACCGTGGTTTTTCCGGAT 390606
Query 111646 CTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCC--- 111702
|| | || || | |||||| | ||||||||| || | || | ||| | || ||
Sbjct 390607 GTCGACAAAGTCGAAGATATCAGAGTGCCATGGTTCTAAGTAAATTGCAAAAGCACCTGG 390666
Query 111703 -CTTTCGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTG 111761
|| | | | ||| |||||| || || || || ||| ||| |||| |||| ||| |
Sbjct 390667 TCTCTTGTTG-CCACCTTGATCAACGTAACGAGCAGTGTTGTTGTATACACGAACCATGG 390725
Query 111762 GAATAATACCATCTGATTGACCATTTGTCCCCCGAA--TACGAGATTTATTGGCTCTCAC 111819
| |||||||||| || ||| || || || || || ||| | | | | |
Sbjct 390726 GGATAATACCATTCGAAGTACCGTTGGTACCTGCAATGTAGGAGCCT--GTAGAACGAAT 390783
Query 111820 ATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAG 111879
| |||||||||| || ||||| || || ||| ||||| ||||| || | |
Sbjct 390784 GTTGTGGATGTGCAATCCGATACCGCCCGCAGTCTTGGAGATCATGGCACATTCTTTCAA 390843
Query 111880 AGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACAT 111939
||| | |||||||| | ||| |||||||| || |||| | ||||| || |||||
Sbjct 390844 AGTATCGTAGATACCTTCGATGGAGTCCTCTTTCATGGCTACCAGGAAACAGGAAGACAT 390903
Query 111940 CTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTT- 111998
||| || || ||||| || ||||| | || || | ||||||| |||| ||| |||
Sbjct 390904 CTGAGGATGAGGAGTACCGGCGTTGAATAACGTGGGCGATGCGTGAGTGAA-ATATCTTA 390962
Query 111999 GGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTG 112058
| ||||| | ||| || || | || || ||||| |||||||| |||| |
Sbjct 390963 GAGACATGAGATTGTAGGTTTCGAGCACTCTTTCGATGTCGCGGCCGTGGATACCGACGG 391022
Query 112059 CGACCCGCATGAACA 112073
| || ||||||| ||
Sbjct 391023 CAACACGCATGATCA 391037
>seq1
Length=762788
Score = 87.8 bits (96), Expect = 2e-12
Identities = 96/128 (75%), Gaps = 0/128 (0%)
Strand=Plus/Plus
Query 122659 GCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCT 122718
||||| || ||| |||||||| |||| | |||| || ||||| ||||| ||||||
Sbjct 619219 GCAAAATCAGTGTGAAGACCCTCGTCTCTGCAAATTAGCTCATTAGAGAACGTTAGACCG 619278
Query 122719 GGCATGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATA 122778
||||| | ||| |||||| | ||| |||||||| || || ||||||||||| | |
Sbjct 619279 GGCATCAAACCTTTCTTCTTTAGCCAGAAAATAGCGGCAAAGGATCCGGAGAAGAAAACA 619338
Query 122779 CCCTCCAC 122786
|| |||||
Sbjct 619339 CCTTCCAC 619346
>seq5
Length=1346284
Score = 86.0 bits (94), Expect = 8e-12
Identities = 285/441 (65%), Gaps = 8/441 (2%)
Strand=Plus/Plus
Query 181586 GATATCCTTGGGGTTGAATGGTGGTACATAGCAACTGAAACCCGTACCGATACCCTCGGT 181645
||| ||| | || | ||| ||||| | || || |||| || || || || || |
Sbjct 1115655 GATGTCCATAGGATGGAAGGGTGGAATATTTGTGCTCCAACCAGTTCCTATGCCTTCAGC 1115714
Query 181646 TCCATTCACGAGAACCATTGGTAAAGTTGGCATGTAAAAGTCTGGTTCAATGGAGCGTCC 181705
|||||| || | |||||| |||| ||| | || | || ||||| || | | |
Sbjct 1115715 TCCATTGACCAAAACCATAGGTATGACTGGTAGATACCATTCGGGTTCTATTGTTTGATC 1115774
Query 181706 ATCATCGTCCAAGTAGTTGAGGATCGGGTCATCCCGAGGATCAAAGATCTTGCGAGCCTC 181765
|||||| | || || || || | || | ||| |||| | || || ||||
Sbjct 1115775 ATCATCCTGTAAATAATTTAGCAAAGGATTATCAAGAGGGTTGAATATGAAACGAGTTAT 1115834
Query 181766 CTTGGTAAGTTTTGTGAAGATATACCTCGTTTGAGAAGCGTCTTTACCACCCATGAGACG 181825
||| | |||| || ||| ||||| || || | |||||||| |||| ||
Sbjct 1115835 CTTATTGAGTTCAGTATTGATGTACCTTGTAGCAGCCGAATCTTTACCGCCCACAGCTCG 1115894
Query 181826 CGTACCAAATTGACCACATGGCTCAAGAAGGTTAATGTTGTTTGAACCTGTATAGTCGTT 181885
|||||||| |||| ||||| | ||||||||||||||| || ||| || |||| |
Sbjct 1115895 AGTACCAAAAGCACCATTTGGCTTTAAAAGGTTAATGTTGTTGGATCCTATAAAGTCTTG 1115954
Query 181886 GGCCAACTTAACGATGGTATCCGCAAGGGACACTTCACCGTGGTGGTAAGCTGACTTGTC 181945
|||| ||| || || | || || ||| ||||||| || || ||| | | | ||
Sbjct 1115955 CGCCATTCCAACAATAGTTTGAGCGAGAGACTCTTCACCATGATGATAACCGGTGTGCTC 1116014
Query 181946 CGCAACATATGCCGCCAA----CTGTGCCACCTTCATTTCATCTTTGAGGTTCTTGTGGA 182001
|| | |||| | |||| ||| || || || || ||| |||| | ||| | | ||
Sbjct 1116015 CG--AGATATAC--CCAATTAGCTGCGCAACTTTAATCTCACCTTTCAAATTCCTTTTGA 1116070
Query 182002 AGCAAGCATACATCACTTTCC 182022
| ||| |||| | |||||||
Sbjct 1116071 AACAACCATATAAAACTTTCC 1116091
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 628031937196800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |