Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lachancea_20fermentati_20[genbank_20GCA_5F900074765.1_202016-10-26] 8 sequences; 10,264,457 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq2 266 4e-66 >seq2 Length=1086951 Score = 266 bits (294), Expect = 4e-66 Identities = 861/1313 (66%), Gaps = 39/1313 (3%) Strand=Plus/Plus Query 118194 GTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATG 118253 || ||||| || || || || |||| ||||||||| |||| || ||||| || ||||| Sbjct 389669 GTATATGGTTCGAAACATTCGTTGTAACCCAAGATCTGGGAAGTAGAGGCAGTTGGCATT 389728 Query 118254 GGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGAGCGTCC 118313 || || | | || ||| | | ||| | || ||||| | | | | || ||| Sbjct 389729 GGGGCTAGCAACAGAGAGTTTCTAATACCGTCTTTGATAATGTCTGCTCTCAAAGTTTCC 389788 Query 118314 CAGTCG--TAGTTGAGCTTTGTCTCCCCCTGCCACATATCAAACTGGAGGATACCTTGGG 118371 || || ||| | || | || ||| | |||||| ||||| || || ||||| | || Sbjct 389789 CAATCCCATAGATCAG-TAGGTGTCCTGCC-CCACATGTCAAATTGAAGAATACCCTCGG 389846 Query 118372 ACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATTCG-GAGCTC 118430 || || ||||||| |||||||| ||||||||||| || ||||| ||| | | | Sbjct 389847 CAGCAGGGGATCCCTTGAATGTCTCGTATGGGCCCTCTTCCAGGGCCAACTCGTGTGAT- 389905 Query 118431 GCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTCATTGCCTTGGCCTCG 118490 ||||| ||||| ||||||||||| || ||||| | | || ||||| | | |||||||| Sbjct 389906 GCCTCTAGGGCAGCGTGATACATAGTCTCAAAGACGTGAATATTCAATTCTTTGGCCTCC 389965 Query 118491 TCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTTGGACACCGAGG 118550 | || || || | | || ||| || || ||| || | ||||| ||||| | Sbjct 389966 TGAGAGTCGAAAGGAATACGCAACATCATGAAAGTATCGGCCAACCCTTGAACACCCAAA 390025 Query 118551 CCAATTGGGCGATGTCTCATATTAGA-CTTCCGAGCGGTCTCCACGGGATAAAAATTCCT 118609 |||| || | |||||||| || || |||| | || || || ||||||||| | || | Sbjct 390026 GCAATAGGTCTGTGTCTCATGTTGGATCTTCTG-GCAGTTTCAACGGGATAATAGTTACG 390084 Query 118610 ATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTA 118669 ||||| || || || | ||| |||||||||||| | |||||||| ||||| || | Sbjct 390085 GTCGATGACTCTGTTCAAATTACGGGTGACAACCTTGGAAATTTCATGTAGCTTCTCAAA 390144 Query 118670 ATCAAAACTGCGAGTC------TCTTCA-----TTGA---CATACTTAGGAAGGGCGATT 118715 | | | ||||| |||||| || | || || || | || | Sbjct 390145 GTTGTACCATTGAGTCTTTCCGTCTTCAGAAGTTTCAATGAATGCT--GGCAATGCAACA 390202 Query 118716 GACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTGCAC 118775 || |||| |||||||| | || || || || |||||| | ||||| ||| Sbjct 390203 GAAGCCAAGTTACACACGGCAGTTTCCTCTGGGGAAGAGTACTCGACGATTTCACAACAC 390262 Query 118776 AAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCC 118835 ||||| ||| ||| ||||| || | ||||||||| || |||||| ||||||| | ||| Sbjct 390263 AAGTTAGAAGACTTGATGGTACCAAGGTTCTTTTGGTTAGACTTTCTGTTACAAGAATCT 390322 Query 118836 TTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGA-C 118894 ||||||| |||| |||| || || || ||||| || | | ||||| || | ||| | | Sbjct 390323 TTGTAAATCATGAATGGAGTACCGGTTTCCGTCTGAGCTTCTAGAATGGCATACCATAGC 390382 Query 118895 ATCGGCAGCTGGCACAGTGGCGTTGGCTCGCCCCTCTTCCTCGTACTTTGTGTAGAGGGC 118954 || | |||| | ||| | | || ||||||| | |||| | || | || Sbjct 390383 TTCTG-AGCTTTGATAGTCTTTCTACCACGGCCCTCTTGCACGTAACGTTCATATAAAGC 390441 Query 118955 TTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGA 119014 ||| || || ||||| | | || | || || || || | | ||| | || | | Sbjct 390442 TTCGAATTCATCACCATAGACATCGGCAAGACCGGGAGCTTCACTAGGGGAAAACAAGGT 390501 Query 119015 CCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAA 119074 ||||| ||| ||| | ||| | ||||||||| | ||||| | ||| || || | ||| Sbjct 390502 CCATTCACCGTTCTCTTGAACTCTCTTCATGAACAAATCTGGAACCCATAGAGCAGGGAA 390561 Query 119075 GAGATC-CCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCA 119133 | ||| | | || || |||||| | || || || || | || | |||||| | Sbjct 390562 CAAATCTCTGGCA-CGGATTTCTTCCTTACCGTGGTTTTTCCGGATGTCGACAAAGTCGA 390620 Query 119134 TGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTG-ACC---CCTTACGACGACCA 119189 |||||| | |||||| ||||| | ||| | || | | ||| || | | ||| Sbjct 390621 AGATATCAGAGTGCCATGGTTCTAAGTAAATTGCAAAAGCACCTGGTCTCTTGTTG-CCA 390679 Query 119190 GCCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCATTGGAATGATACCATCG 119249 | || | || || | |||||| ||| ||||||||| ||| || || ||||||| Sbjct 390680 CCTTGATCAACGTAACGAGCAGTGTTGTTGTATACACGAACCATGGGGATAATACCATTC 390739 Query 119250 GATTGGCCATTTGTCCCCCGAA--TACGAGACTTATTGGCTCTGACATCGTGGATGTGCA 119307 || || || || || || || ||| || | | | | | ||||||||||| Sbjct 390740 GAAGTACCGTTGGTACCTGCAATGTAGGAGCCT--GTAGAACGAATGTTGTGGATGTGCA 390797 Query 119308 TACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCC 119367 || ||||| || || ||| ||||| || || || | | | | ||||||| | Sbjct 390798 ATCCGATACCGCCCGCAGTCTTGGAGATCATGGCACATTCTTTCAAAGTATCGTAGATAC 390857 Query 119368 CATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGAGGCCTGGGTG 119427 | ||||| ||||| | || | || | ||||| ||| ||||| ||||| || | Sbjct 390858 CTTCGATGGAGTCCTCTTTCATGGCTACCAGGAAACAGGAAGACATCTGAGGATGAGGAG 390917 Query 119428 TACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAACATACCTT-GGGACAT 119479 |||| |||||||| | || || | ||||| |||| ||| ||| | ||||| Sbjct 390918 TACCGGCGTTGAATAACGTGGGCGATGCGTGAGTGAA-ATATCTTAGAGACAT 390969 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618435138156480