Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lachancea_20fermentati_20[genbank_20GCA_5F900074765.1_202016-10-26]
8 sequences; 10,264,457 total letters
Query= NC_028092.1
Length=193301
Score E
Sequences producing significant alignments: (Bits) Value
seq2 266 4e-66
>seq2
Length=1086951
Score = 266 bits (294), Expect = 4e-66
Identities = 861/1313 (66%), Gaps = 39/1313 (3%)
Strand=Plus/Plus
Query 118194 GTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATG 118253
|| ||||| || || || || |||| ||||||||| |||| || ||||| || |||||
Sbjct 389669 GTATATGGTTCGAAACATTCGTTGTAACCCAAGATCTGGGAAGTAGAGGCAGTTGGCATT 389728
Query 118254 GGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGAGCGTCC 118313
|| || | | || ||| | | ||| | || ||||| | | | | || |||
Sbjct 389729 GGGGCTAGCAACAGAGAGTTTCTAATACCGTCTTTGATAATGTCTGCTCTCAAAGTTTCC 389788
Query 118314 CAGTCG--TAGTTGAGCTTTGTCTCCCCCTGCCACATATCAAACTGGAGGATACCTTGGG 118371
|| || ||| | || | || ||| | |||||| ||||| || || ||||| | ||
Sbjct 389789 CAATCCCATAGATCAG-TAGGTGTCCTGCC-CCACATGTCAAATTGAAGAATACCCTCGG 389846
Query 118372 ACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATTCG-GAGCTC 118430
|| || ||||||| |||||||| ||||||||||| || ||||| ||| | | |
Sbjct 389847 CAGCAGGGGATCCCTTGAATGTCTCGTATGGGCCCTCTTCCAGGGCCAACTCGTGTGAT- 389905
Query 118431 GCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTCATTGCCTTGGCCTCG 118490
||||| ||||| ||||||||||| || ||||| | | || ||||| | | ||||||||
Sbjct 389906 GCCTCTAGGGCAGCGTGATACATAGTCTCAAAGACGTGAATATTCAATTCTTTGGCCTCC 389965
Query 118491 TCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTTGGACACCGAGG 118550
| || || || | | || ||| || || ||| || | ||||| ||||| |
Sbjct 389966 TGAGAGTCGAAAGGAATACGCAACATCATGAAAGTATCGGCCAACCCTTGAACACCCAAA 390025
Query 118551 CCAATTGGGCGATGTCTCATATTAGA-CTTCCGAGCGGTCTCCACGGGATAAAAATTCCT 118609
|||| || | |||||||| || || |||| | || || || ||||||||| | || |
Sbjct 390026 GCAATAGGTCTGTGTCTCATGTTGGATCTTCTG-GCAGTTTCAACGGGATAATAGTTACG 390084
Query 118610 ATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTA 118669
||||| || || || | ||| |||||||||||| | |||||||| ||||| || |
Sbjct 390085 GTCGATGACTCTGTTCAAATTACGGGTGACAACCTTGGAAATTTCATGTAGCTTCTCAAA 390144
Query 118670 ATCAAAACTGCGAGTC------TCTTCA-----TTGA---CATACTTAGGAAGGGCGATT 118715
| | | ||||| |||||| || | || || || | || |
Sbjct 390145 GTTGTACCATTGAGTCTTTCCGTCTTCAGAAGTTTCAATGAATGCT--GGCAATGCAACA 390202
Query 118716 GACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTGCAC 118775
|| |||| |||||||| | || || || || |||||| | ||||| |||
Sbjct 390203 GAAGCCAAGTTACACACGGCAGTTTCCTCTGGGGAAGAGTACTCGACGATTTCACAACAC 390262
Query 118776 AAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCC 118835
||||| ||| ||| ||||| || | ||||||||| || |||||| ||||||| | |||
Sbjct 390263 AAGTTAGAAGACTTGATGGTACCAAGGTTCTTTTGGTTAGACTTTCTGTTACAAGAATCT 390322
Query 118836 TTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGA-C 118894
||||||| |||| |||| || || || ||||| || | | ||||| || | ||| | |
Sbjct 390323 TTGTAAATCATGAATGGAGTACCGGTTTCCGTCTGAGCTTCTAGAATGGCATACCATAGC 390382
Query 118895 ATCGGCAGCTGGCACAGTGGCGTTGGCTCGCCCCTCTTCCTCGTACTTTGTGTAGAGGGC 118954
|| | |||| | ||| | | || ||||||| | |||| | || | ||
Sbjct 390383 TTCTG-AGCTTTGATAGTCTTTCTACCACGGCCCTCTTGCACGTAACGTTCATATAAAGC 390441
Query 118955 TTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGA 119014
||| || || ||||| | | || | || || || || | | ||| | || | |
Sbjct 390442 TTCGAATTCATCACCATAGACATCGGCAAGACCGGGAGCTTCACTAGGGGAAAACAAGGT 390501
Query 119015 CCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAA 119074
||||| ||| ||| | ||| | ||||||||| | ||||| | ||| || || | |||
Sbjct 390502 CCATTCACCGTTCTCTTGAACTCTCTTCATGAACAAATCTGGAACCCATAGAGCAGGGAA 390561
Query 119075 GAGATC-CCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCA 119133
| ||| | | || || |||||| | || || || || | || | |||||| |
Sbjct 390562 CAAATCTCTGGCA-CGGATTTCTTCCTTACCGTGGTTTTTCCGGATGTCGACAAAGTCGA 390620
Query 119134 TGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTG-ACC---CCTTACGACGACCA 119189
|||||| | |||||| ||||| | ||| | || | | ||| || | | |||
Sbjct 390621 AGATATCAGAGTGCCATGGTTCTAAGTAAATTGCAAAAGCACCTGGTCTCTTGTTG-CCA 390679
Query 119190 GCCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCATTGGAATGATACCATCG 119249
| || | || || | |||||| ||| ||||||||| ||| || || |||||||
Sbjct 390680 CCTTGATCAACGTAACGAGCAGTGTTGTTGTATACACGAACCATGGGGATAATACCATTC 390739
Query 119250 GATTGGCCATTTGTCCCCCGAA--TACGAGACTTATTGGCTCTGACATCGTGGATGTGCA 119307
|| || || || || || || ||| || | | | | | |||||||||||
Sbjct 390740 GAAGTACCGTTGGTACCTGCAATGTAGGAGCCT--GTAGAACGAATGTTGTGGATGTGCA 390797
Query 119308 TACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCC 119367
|| ||||| || || ||| ||||| || || || | | | | ||||||| |
Sbjct 390798 ATCCGATACCGCCCGCAGTCTTGGAGATCATGGCACATTCTTTCAAAGTATCGTAGATAC 390857
Query 119368 CATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGAGGCCTGGGTG 119427
| ||||| ||||| | || | || | ||||| ||| ||||| ||||| || |
Sbjct 390858 CTTCGATGGAGTCCTCTTTCATGGCTACCAGGAAACAGGAAGACATCTGAGGATGAGGAG 390917
Query 119428 TACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAACATACCTT-GGGACAT 119479
|||| |||||||| | || || | ||||| |||| ||| ||| | |||||
Sbjct 390918 TACCGGCGTTGAATAACGTGGGCGATGCGTGAGTGAA-ATATCTTAGAGACAT 390969
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 618435138156480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |