Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lachancea_20fermentati_20[genbank_20GCA_5F900074765.1_202016-10-26]
8 sequences; 10,264,457 total letters
Query= NC_028093.1
Length=182309
Score E
Sequences producing significant alignments: (Bits) Value
seq2 275 7e-69
>seq2
Length=1086951
Score = 275 bits (304), Expect = 7e-69
Identities = 915/1394 (66%), Gaps = 41/1394 (3%)
Strand=Plus/Minus
Query 104232 TGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTCTTGGAGACAT 104291
|| ||||||| || ||| ||||||| || || ||||| || || | || || |
Sbjct 391037 TGATCATGCGTGTTGCCGTCGGTATCCACGGCCGCGACATCGAAAGAGTGCTCGAAACCT 390978
Query 104292 ACGACAAGATGTCCC-AAGGTATGTTCATTCACGCAACACCAACCCTCTTCAATGCTGGT 104350
|| | ||||| | ||| ||| |||| ||||||| | || || | ||||| || |||
Sbjct 390977 ACAATCTCATGTCTCTAAGATAT-TTCACTCACGCATCGCCCACGTTATTCAACGCCGGT 390919
Query 104351 ACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGACTCAATCAAC 104410
|| || || || ||||| || ||||| | |||| || |||||||| ||| |
Sbjct 390918 ACTCCTCATCCTCAGATGTCTTCCTGTTTCCTGGTAGCCATGAAAGAGGACTCCATCGAA 390859
Query 104411 GGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGGGGGTATTGGG 104470
|||||||| | ||| | | || ||||| ||||| ||| || || ||||| ||
Sbjct 390858 GGTATCTACGATACTTTGAAAGAATGTGCCATGATCTCCAAGACTGCGGGCGGTATCGGA 390799
Query 104471 ATGCACATCCATGATGTGAGAGCCAATAAATCTCGTA--TTCGGGGGACAAATGGTCAAT 104528
|||||||||| | | | | | | ||| || || || || || ||| |
Sbjct 390798 TTGCACATCCACAACATTCGTTCTAC--AGGCTCCTACATTGCAGGTACCAACGGTACTT 390741
Query 104529 CAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAATCAAG 104588
| |||||||||| || ||| |||| |||| ||| ||| || || || || ||||||
Sbjct 390740 CGAATGGTATTATCCCCATGGTTCGTGTATACAACAACACTGCTCGTTACGTTGATCAAG 390681
Query 104589 CTGGGCGTCGAAAG----GGATCTATCGCAGTCTATCTTGAGCCATGGCACGCGGATATC 104644
||| | | | || || || | ||| | || | || ||||||||| | ||||||
Sbjct 390680 GTGG-CAACAAGAGACCAGGTGCTTTTGCAATTTACTTAGAACCATGGCACTCTGATATC 390622
Query 104645 ATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGGTGCC-GCGATCT 104703
| || || | || | || ||||| ||| | || || || |||| | ||| |
Sbjct 390621 TTCGACTTTGTCGACATCCGGAAAAACCACGGTAAGGAAGAAATCCG-TGCCAGAGATTT 390563
Query 104704 CTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGTGGCAATTG 104763
||| | ||||| ||| |||||||| | ||||||||||||||| | |||| || | ||
Sbjct 390562 GTTCCCTGCTCTATGGGTTCCAGATTTGTTCATGAAGAGAGTTCAAGAGAACGGTGAATG 390503
Query 104764 GTCTCTCTTTTGTCC-AGACAAGGCACCTGGTCTCTCCGATGCCGTGGGTGAGGAGTTTG 104822
| | | |||| || || ||| | || ||||| |||||| | ||||| || || |
Sbjct 390502 GACCTTGTTTTCCCCTAGTGAAG-CTCCCGGTCTTGCCGATGTCTATGGTGATGAATTCG 390444
Query 104823 AAGCCCTTTACACAAAG--TACGAGGAAGAAGGTCGGGCGACTGCGACGGTGCCAGCTGC 104880
|||| |||| | || |||| | |||| || || | | ||| | |||| |
Sbjct 390443 AAGC--TTTATATGAACGTTACGTGCAAGAGGGCCGTGGTAGAAAGACTATCAAAGCT-C 390387
Query 104881 CGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATACATGCTTT 104939
|| | | ||| | || ||||| | |||| || || || ||||| |||| |||| |||
Sbjct 390386 AGAAGCTATGGTATGCCATTCTAGAAGCTCAGACGGAAACCGGTACTCCATTCATGATTT 390327
Query 104940 ACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCA 104999
||||||| | |||||| |||| ||| |||||||| | ||| |||||| ||| |
Sbjct 390326 ACAAAGATTCTTGTAACAGAAAGTCTAACCAAAAGAACCTTGGTACCATCAAGTCTTCTA 390267
Query 105000 ATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTAACCTCG 105059
| | ||| |||||| | || | | | ||| || || || ||||||||| | |
Sbjct 390266 ACTTGTGTTGTGAAATCGTCGAGTACTCTTCCCCAGAGGAAACTGCCGTGTGTAACTTGG 390207
Query 105060 CATCAATCGCTCTCCC--CAAGTATGTGGATC--CAGA-GAC--AAAGAC--ATTTG--- 105107
| || | || | || || || || | | | || ||| |||||| | | |
Sbjct 390206 CTTCTGTTGCATTGCCAGCATTCAT-TGAAACTTCTGAAGACGGAAAGACTCAATGGTAC 390148
Query 105108 -ATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTTATT 105166
| | ||| || || || ||| || | || ||||||| || | |||||||| ||
Sbjct 390147 AACTTTGAGAAGCTACATGAAATTTCCAAGGTTGTCACCCGTAATTTGAACAGAGTCATC 390088
Query 105167 GATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATT 105226
|| | || | ||| |||||||| ||||| | | ||| || ||||||||| | || |||
Sbjct 390087 GACCGTAACTATTATCCCGTTGAAACTGCCAGAAGATCCAACATGAGACACAGACCTATT 390028
Query 105227 GGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCATTCTTTGTCGCCACGCATTTGATTCC 105286
| | | |||||||| || | || ||| ||||| | | || | || || ||
Sbjct 390027 GCTTTGGGTGTTCAAGGGTTGGCCGATACTTTCATGATGTTGCGTATTCCTTTCGACTCT 389968
Query 105287 GACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCTCTTGAG 105346
| || || || ||| | ||| | | | |||||||| ||||||||||| || || |||
Sbjct 389967 CAGGAGGCCAAAGAATTGAATATTCACGTCTTTGAGACTATGTATCACGCTGCCCTAGAG 389908
Query 105347 GCGAGTTCA-GAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGC 105405
|| | || |||||||| || || || ||||| || || || |||| || || ||
Sbjct 389907 GC-ATCACACGAGTTGGCCCTGGAAGAGGGCCCATACGAGACATTCAAGGGATCCCCTGC 389849
Query 105406 TTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCTTCACTACG--AC 105463
| | | || | ||||||||||| ||||||| | || ||| | || ||| | |
Sbjct 389848 TGCCGAGGGTATTCTTCAATTTGACATGTGGGGCAG-GACACCTA-CTGATCTATGGGAT 389791
Query 105464 TGGGAAGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTCCTCATGGCT 105523
|||||| || | | | | ||| | | | ||| || | ||| ||| | | ||
Sbjct 389790 TGGGAAACTTTGAGAGCAGACATTATCAAAGACGGTATTAGAAACTCTCTGTTGCTAGCC 389731
Query 105524 CCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTAC 105583
||||||||||| ||||| || | || ||||||||| | || ||||| || ||||| ||
Sbjct 389730 CCAATGCCAACTGCCTCTACTTCCCAGATCTTGGGTTACAACGAATGTTTCGAACCATAT 389671
Query 105584 ACGACGAACATCTA 105597
|| | ||||| ||
Sbjct 389670 ACCTCAAACATGTA 389657
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583260741673920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |