Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lachancea_20fermentati_20[genbank_20GCA_5F900074765.1_202016-10-26] 8 sequences; 10,264,457 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq2 275 7e-69 >seq2 Length=1086951 Score = 275 bits (304), Expect = 7e-69 Identities = 915/1394 (66%), Gaps = 41/1394 (3%) Strand=Plus/Minus Query 104232 TGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTCTTGGAGACAT 104291 || ||||||| || ||| ||||||| || || ||||| || || | || || | Sbjct 391037 TGATCATGCGTGTTGCCGTCGGTATCCACGGCCGCGACATCGAAAGAGTGCTCGAAACCT 390978 Query 104292 ACGACAAGATGTCCC-AAGGTATGTTCATTCACGCAACACCAACCCTCTTCAATGCTGGT 104350 || | ||||| | ||| ||| |||| ||||||| | || || | ||||| || ||| Sbjct 390977 ACAATCTCATGTCTCTAAGATAT-TTCACTCACGCATCGCCCACGTTATTCAACGCCGGT 390919 Query 104351 ACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGACTCAATCAAC 104410 || || || || ||||| || ||||| | |||| || |||||||| ||| | Sbjct 390918 ACTCCTCATCCTCAGATGTCTTCCTGTTTCCTGGTAGCCATGAAAGAGGACTCCATCGAA 390859 Query 104411 GGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGGGGGTATTGGG 104470 |||||||| | ||| | | || ||||| ||||| ||| || || ||||| || Sbjct 390858 GGTATCTACGATACTTTGAAAGAATGTGCCATGATCTCCAAGACTGCGGGCGGTATCGGA 390799 Query 104471 ATGCACATCCATGATGTGAGAGCCAATAAATCTCGTA--TTCGGGGGACAAATGGTCAAT 104528 |||||||||| | | | | | | ||| || || || || || ||| | Sbjct 390798 TTGCACATCCACAACATTCGTTCTAC--AGGCTCCTACATTGCAGGTACCAACGGTACTT 390741 Query 104529 CAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAATCAAG 104588 | |||||||||| || ||| |||| |||| ||| ||| || || || || |||||| Sbjct 390740 CGAATGGTATTATCCCCATGGTTCGTGTATACAACAACACTGCTCGTTACGTTGATCAAG 390681 Query 104589 CTGGGCGTCGAAAG----GGATCTATCGCAGTCTATCTTGAGCCATGGCACGCGGATATC 104644 ||| | | | || || || | ||| | || | || ||||||||| | |||||| Sbjct 390680 GTGG-CAACAAGAGACCAGGTGCTTTTGCAATTTACTTAGAACCATGGCACTCTGATATC 390622 Query 104645 ATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGGTGCC-GCGATCT 104703 | || || | || | || ||||| ||| | || || || |||| | ||| | Sbjct 390621 TTCGACTTTGTCGACATCCGGAAAAACCACGGTAAGGAAGAAATCCG-TGCCAGAGATTT 390563 Query 104704 CTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGTGGCAATTG 104763 ||| | ||||| ||| |||||||| | ||||||||||||||| | |||| || | || Sbjct 390562 GTTCCCTGCTCTATGGGTTCCAGATTTGTTCATGAAGAGAGTTCAAGAGAACGGTGAATG 390503 Query 104764 GTCTCTCTTTTGTCC-AGACAAGGCACCTGGTCTCTCCGATGCCGTGGGTGAGGAGTTTG 104822 | | | |||| || || ||| | || ||||| |||||| | ||||| || || | Sbjct 390502 GACCTTGTTTTCCCCTAGTGAAG-CTCCCGGTCTTGCCGATGTCTATGGTGATGAATTCG 390444 Query 104823 AAGCCCTTTACACAAAG--TACGAGGAAGAAGGTCGGGCGACTGCGACGGTGCCAGCTGC 104880 |||| |||| | || |||| | |||| || || | | ||| | |||| | Sbjct 390443 AAGC--TTTATATGAACGTTACGTGCAAGAGGGCCGTGGTAGAAAGACTATCAAAGCT-C 390387 Query 104881 CGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATACATGCTTT 104939 || | | ||| | || ||||| | |||| || || || ||||| |||| |||| ||| Sbjct 390386 AGAAGCTATGGTATGCCATTCTAGAAGCTCAGACGGAAACCGGTACTCCATTCATGATTT 390327 Query 104940 ACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCA 104999 ||||||| | |||||| |||| ||| |||||||| | ||| |||||| ||| | Sbjct 390326 ACAAAGATTCTTGTAACAGAAAGTCTAACCAAAAGAACCTTGGTACCATCAAGTCTTCTA 390267 Query 105000 ATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTAACCTCG 105059 | | ||| |||||| | || | | | ||| || || || ||||||||| | | Sbjct 390266 ACTTGTGTTGTGAAATCGTCGAGTACTCTTCCCCAGAGGAAACTGCCGTGTGTAACTTGG 390207 Query 105060 CATCAATCGCTCTCCC--CAAGTATGTGGATC--CAGA-GAC--AAAGAC--ATTTG--- 105107 | || | || | || || || || | | | || ||| |||||| | | | Sbjct 390206 CTTCTGTTGCATTGCCAGCATTCAT-TGAAACTTCTGAAGACGGAAAGACTCAATGGTAC 390148 Query 105108 -ATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTTATT 105166 | | ||| || || || ||| || | || ||||||| || | |||||||| || Sbjct 390147 AACTTTGAGAAGCTACATGAAATTTCCAAGGTTGTCACCCGTAATTTGAACAGAGTCATC 390088 Query 105167 GATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATT 105226 || | || | ||| |||||||| ||||| | | ||| || ||||||||| | || ||| Sbjct 390087 GACCGTAACTATTATCCCGTTGAAACTGCCAGAAGATCCAACATGAGACACAGACCTATT 390028 Query 105227 GGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCATTCTTTGTCGCCACGCATTTGATTCC 105286 | | | |||||||| || | || ||| ||||| | | || | || || || Sbjct 390027 GCTTTGGGTGTTCAAGGGTTGGCCGATACTTTCATGATGTTGCGTATTCCTTTCGACTCT 389968 Query 105287 GACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCTCTTGAG 105346 | || || || ||| | ||| | | | |||||||| ||||||||||| || || ||| Sbjct 389967 CAGGAGGCCAAAGAATTGAATATTCACGTCTTTGAGACTATGTATCACGCTGCCCTAGAG 389908 Query 105347 GCGAGTTCA-GAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGC 105405 || | || |||||||| || || || ||||| || || || |||| || || || Sbjct 389907 GC-ATCACACGAGTTGGCCCTGGAAGAGGGCCCATACGAGACATTCAAGGGATCCCCTGC 389849 Query 105406 TTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCTTCACTACG--AC 105463 | | | || | ||||||||||| ||||||| | || ||| | || ||| | | Sbjct 389848 TGCCGAGGGTATTCTTCAATTTGACATGTGGGGCAG-GACACCTA-CTGATCTATGGGAT 389791 Query 105464 TGGGAAGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTCCTCATGGCT 105523 |||||| || | | | | ||| | | | ||| || | ||| ||| | | || Sbjct 389790 TGGGAAACTTTGAGAGCAGACATTATCAAAGACGGTATTAGAAACTCTCTGTTGCTAGCC 389731 Query 105524 CCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTAC 105583 ||||||||||| ||||| || | || ||||||||| | || ||||| || ||||| || Sbjct 389730 CCAATGCCAACTGCCTCTACTTCCCAGATCTTGGGTTACAACGAATGTTTCGAACCATAT 389671 Query 105584 ACGACGAACATCTA 105597 || | ||||| || Sbjct 389670 ACCTCAAACATGTA 389657 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583260741673920