Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lachancea_20fermentati_20[genbank_20GCA_5F900074765.1_202016-10-26] 8 sequences; 10,264,457 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq2 251 8e-62 seq1 82.4 8e-11 >seq2 Length=1086951 Score = 251 bits (278), Expect = 8e-62 Identities = 899/1392 (65%), Gaps = 50/1392 (4%) Strand=Plus/Plus Query 78534 GTAGATGTTGGTCGTGTACGGCTCGAAAGCCTCGTTGTTCCCCATGATCTGGGCGGTCGA 78593 ||| ||||| | || || || |||||| ||||||| |||| |||||||| || || Sbjct 389656 GTACATGTTTGAGGTATATGGTTCGAAACATTCGTTGTAACCCAAGATCTGGGAAGTAGA 389715 Query 78594 GGCGGTCGGCATGGGTGCGACCAGTAGAGAATTCCGAAGACCATGC--------GTCTTG 78645 ||| || ||||| || || | || ||||| || | || ||| | |||| | Sbjct 389716 GGCAGTTGGCATTGGGGCTAGCAACAGAGAGTTTCTAATACCGTCTTTGATAATGTCT-G 389774 Query 78646 ATCTCGACCTTTAGGCCGTCCCAAAATTCATTCGCCGCGATCCCCCACATGTCCGGTTGA 78705 |||| | ||| | ||||| | ||| | | | | ||||||||||| |||| Sbjct 389775 CTCTCAAAGTTTCC-CAATCCCATAGATCAGTAGGTGTCCTGCCCCACATGTCAAATTGA 389833 Query 78706 AGGATACCCTCGGACGCCGGCGACCCCTTGAACGTCTCGTAAGATCCCTCCTCCTTGGCG 78765 || |||||||||| || || || |||||||| |||||||| | ||||| ||| ||| Sbjct 389834 AGAATACCCTCGGCAGCAGGGGATCCCTTGAATGTCTCGTATGGGCCCTCTTCCAGGGCC 389893 Query 78766 AGTTCGCATGACTCGAGCAGGGCCGCGTGGTACACAGCCTCGAAGATGCCCTTGTTGAGC 78825 | ||| ||| | ||||| ||||| |||| || ||| |||| | | || | Sbjct 389894 AACTCGTGTGATGCCTCTAGGGCAGCGTGATACATAGTCTCAAAGACGTGAATATTCAAT 389953 Query 78826 TCGCGCGCCTTGGTCTCGTCGAACGAAAGGCCGAGCATCATGAAGACATCGGCCAGGCCC 78885 || |||| |||||| | || | | ||||||||| |||||||| || Sbjct 389954 TCTTTGGCCTCCTGAGAGTCGAAAGGAATACGCAACATCATGAAAGTATCGGCCAACCCT 390013 Query 78886 TGGACGCCGATAGCGATCGGTCGGTGGCGCATGTTGCTCTTTCGGGCCGCCTCGGTCGGG 78945 || || || | ||| || |||| ||| | ||||||| ||| ||| | || || Sbjct 390014 TGAACACCCAAAGCAATAGGTCTGTGTCTCATGTTGGATCTTCTGGCAGTTTCAACGGGA 390073 Query 78946 TAAAAGTTCCGATCGATGACGCGGTTCAGGTTACGCGTGACGACCCGAGTCACCTCGTAC 79005 ||| |||| || |||||||| | ||||| ||||| ||||| ||| | | || | Sbjct 390074 TAATAGTTACGGTCGATGACTCTGTTCAAATTACGGGTGACAACCTTGGAAATTTCATGT 390133 Query 79006 AATTTGGCGAAATCAAAA---TGA---TTTCC------------TTTGATGAAAGTCGGT 79047 | || | || | | ||| ||||| || ||||| | || Sbjct 390134 AGCTTCTCAAAGTTGTACCATTGAGTCTTTCCGTCTTCAGAAGTTTCAATGAATGCTGGC 390193 Query 79048 AG-GCACAGCGATGCCAGGTTGCACACGGCCGTCTCGTCCGGGCTAGAAACCTCGATGAT 79106 | ||| | || |||| ||| |||||||| || || || ||| ||| ||||| ||| Sbjct 390194 AATGCA-ACAGAAGCCAAGTTACACACGGCAGTTTCCTCTGGGGAAGAGTACTCGACGAT 390252 Query 79107 TTCTGTGCACAAATTAGACGACTTGATGGTGCCGATGTTCTTCTGGTTGCTCTTCTCGTT 79166 ||| ||||| ||||| ||||||||||| || | |||||| ||||| ||| ||| Sbjct 390253 TTCACAACACAAGTTAGAAGACTTGATGGTACCAAGGTTCTTTTGGTTAGACTTTCTGTT 390312 Query 79167 ACAGGCGTCCTTGTAGCACATGTACGGCGTCCCGGTCTCAACCTGACTCTTGAGAACGCC 79226 ||| | || ||||| |||| | || || ||||| || |||| | |||| | | Sbjct 390313 ACAAGAATCTTTGTAAATCATGAATGGAGTACCGGTTTCCGTCTGAGCTTCTAGAATGGC 390372 Query 79227 GTCCCAGATGTCCCGGGCCCGGACAACCTTCTTGTACC--GACCCTGTGCGACGTA-CGT 79283 | ||| | | | | || || | ||| | |||| | |||| | ||||| ||| Sbjct 390373 ATACCATAGCTTCTGAGCTTTGATAGTCTT--TCTACCACGGCCCTCTTGCACGTAACGT 390430 Query 79284 CCGGTACAACTCGTTGAAAGCCTCCCCATAGACATCGGGCAGGCCCGGG-----CACTCG 79338 | || || | | ||| | || ||||||||||||| || | ||||| |||| | Sbjct 390431 TCA-TATAAAGCTTCGAATTCATCACCATAGACATCGG-CAAGACCGGGAGCTTCACTAG 390488 Query 79339 TGCGGGCACATCAGGTGCCAGTCCTCGTCCTTCTCAACCTTCTCCATGAAGAGGTCCGGG 79398 ||| | | |||| ||| || ||| || | ||| ||| |||||| | || || Sbjct 390489 ---GGGAAAACAAGGT-CCATTCACCGTTCTCTTGAACTCTCTTCATGAACAAATCTGGA 390544 Query 79399 ATCCACAGGGCCGTGAAGAGGTCGCGGCAACGCATCTCCTCGTCGCCCTGGTTCAGACGC 79458 | ||| || || | ||| | || | | ||| || || || | || ||||| || Sbjct 390545 ACCCATAGAGCAGGGAACAAATCTCTGGCACGGATTTCTTCCTTACCGTGGTTTTTCCGG 390604 Query 79459 AGCTCGAGAAAGTCCATGATGTCGGCGTGCCACGGCTCCAGATAGATGGCGAACGAACCC 79518 | |||| |||||| | ||| || | |||||| || || | || || || || | ||| Sbjct 390605 ATGTCGACAAAGTCGAAGATATCAGAGTGCCATGGTTCTAAGTAAATTGCAAAAGCACCT 390664 Query 79519 TTGCGCTTGCCGCCGCCCTGGTTGACGTACCGGGCCGTGTTGTTGAAAACTCGGAGCATG 79578 | |||| ||| || || | ||||| || || ||||||||| | || || | |||| Sbjct 390665 GGTCTCTTGTTGCCACCTTGATCAACGTAACGAGCAGTGTTGTTGTATACACGAACCATG 390724 Query 79579 GGCACGATGCCGTCGGCGACG--CCGTTCGTCCCGTTGATTCGTGTACCGCTCGCCCGAA 79636 || | || || | ||| | ||||| || || || | || | | |||| Sbjct 390725 GGGATAATACCATT--CGAAGTACCGTTGGTACCTGCAATGTAGGAGCCTGTAGAACGAA 390782 Query 79637 TGTTCGAGCAGTGGATTCCGATGCCCCCGGACCACTTGGAGATGTGCGCGCACTCCTTGA 79696 |||| | ||| | |||||| || || | ||||||||| || || || || | Sbjct 390783 TGTTGTGGATGTGCAATCCGATACCGCCCGCAGTCTTGGAGATCATGGCACATTCTTTCA 390842 Query 79697 GCGTCTCGTAGATGCCCTCGATCGAGTCGTCCTTCATAGCGACCAGGAAGCAGCTCGACA 79756 || |||||||| || ||||| ||||| || ||||| || |||||||| ||| |||| Sbjct 390843 AAGTATCGTAGATACCTTCGATGGAGTCCTCTTTCATGGCTACCAGGAAACAGGAAGACA 390902 Query 79757 TCTGTGGGTTGTTCGTACCGGCGTTGAAGAGGGTCGGCGTCGCGTGCGTGAAGAACTTTT 79816 |||| || | |||||||||||||| | || |||| ||||| ||||| | || Sbjct 390903 TCTGAGGATGAGGAGTACCGGCGTTGAATAACGTGGGCGATGCGTGAGTGAAATATCTTA 390962 Query 79817 GGCTCATCAGATCGTACGTCTCCTTGACGCGCGGGAGGTCGTCGCCGTGGATGCCGACCG 79876 | ||| |||| ||| || || || | || |||| ||||||||| ||||| | Sbjct 390963 GAGACATGAGATTGTAGGTTTCGAGCACTCTTTCGATGTCGCGGCCGTGGATACCGACGG 391022 Query 79877 CGACGCGCATGA 79888 | || ||||||| Sbjct 391023 CAACACGCATGA 391034 Score = 172 bits (190), Expect = 6e-38 Identities = 902/1425 (63%), Gaps = 36/1425 (3%) Strand=Plus/Minus Query 19103 CCTCAGTACCTTTTCATGCGAGTCGCGGTCGGCATCCATGGCGACGACCTCCCGCGAGTC 19162 |||||| | | ||||||| || || ||||| ||||| ||| |||| || |||| Sbjct 391047 CCTCAGCATTTGATCATGCGTGTTGCCGTCGGTATCCACGGCCGCGACATCGAAAGAGTG 390988 Query 19163 CGCGAGACATACGACCTGATGAGCCAGAAGTTCTTCACGCACGCGACGCCGACCCTTTTC 19222 | ||| || ||| | || ||| | | | ||||| ||||| |||| || | ||| Sbjct 390987 CTCGAAACCTACAATCTCATGTCTCTAAGATATTTCACTCACGCATCGCCCACGTTATTC 390928 Query 19223 AACGCCGGTACGAACAACCCGCAGATGTCGAGCTGTTTCCTAGTGGCTATGAAGGATGAC 19282 ||||||||||| | || |||||||| ||||||||| || || ||||| || ||| Sbjct 390927 AACGCCGGTACTCCTCATCCTCAGATGTCTTCCTGTTTCCTGGTAGCCATGAAAGAGGAC 390868 Query 19283 AGCATTGAGGGCATCTACGAGACGCTCAAGGAGTGCGCGCACATCTCCAAGTGGTCCGGG 19342 ||| || || |||||||| || | || || || || ||||||||| | || Sbjct 390867 TCCATCGAAGGTATCTACGATACTTTGAAAGAATGTGCCATGATCTCCAAGACTGCGGGC 390808 Query 19343 GGTATCGGGATCCACTGCTCGAATATCCGGTCGAGTGGTACACGAATCAATGGGACGAAC 19402 |||||||| | ||| | || || || || | || | || || || ||| Sbjct 390807 GGTATCGGATTGCACATCCACAACATTCGTTCTACAGGCTCCTACATTGCAGGTACCAAC 390748 Query 19403 GGAGTAGCCGACGGTATCGTCCCAATGCTCCGCGTCTTCAACAACACGGCCAGGTACGTC 19462 || | | ||||| |||| ||| | || || | ||||||||| || | ||||| Sbjct 390747 GGTACTTCGAATGGTATTATCCCCATGGTTCGTGTATACAACAACACTGCTCGTTACGTT 390688 Query 19463 AACCAGGGGGGCGGCAAACG--CAAGGGCTCGTTCGCCATCTACCTCGAGCCATGGCACG 19520 | || || ||| ||| | || | ||| || || || ||| | || ||||||||| Sbjct 390687 GATCAAGGTGGCAACAAGAGACCAGGTGCT--TTTGCAATTTACTTAGAACCATGGCACT 390630 Query 19521 CGGACGTCATGGATTTCCTCGAACTGCGCCTGAACCAGGGTGACGAGGAGATGCGCTGTC 19580 | || || | || || |||| | || ||||| ||| | || || || || || | Sbjct 390629 CTGATATCTTCGACTTTGTCGACATCCGGAAAAACCACGGTAAGGAAGAAATCCG-TGCC 390571 Query 19581 -GCGACCTCTTCACGGCCTTGTGGATTCCGGACCTATTCATGGAGAAGGTTGAGAAGGAC 19639 | || | ||| | || | ||| |||| || | |||||| ||| ||| | || || Sbjct 390570 AGAGATTTGTTCCCTGCTCTATGGGTTCCAGATTTGTTCATGAAGAGAGTTCAAGAGAAC 390511 Query 19640 GAAGAATGGCACCTGATGTGCCCGCACGAATGCCCTGGCCTACCCGACGTCTACGGCGAG 19699 | |||||| | || | | ||| ||| || || || |||| ||||| || || Sbjct 390510 GGTGAATGGACCTTGTTTTCCCCTAGTGAAGCTCCCGGTCTTGCCGATGTCTATGGTGAT 390451 Query 19700 GCGTTCAATGAGTTGTACCGGAC-TTACGTAGCCCAGGGCCGGTTCAAGAAGGTGGTCCG 19758 | ||| | | || || | || |||||| ||||||| | ||| || Sbjct 390450 GAATTCGAAGCTTTATA-TGAACGTTACGTGCAAGAGGGCCGTGGTAGAAAGACTATCAA 390392 Query 19759 GGCCCGGGACGTCTGGGACCGCGTCCTCAAAAGC-CAGGTCGAGACCGGCACACCGTACA 19817 || | | | | ||| | | | || | |||| ||| || ||||| || || | || Sbjct 390391 AGCTCAGAAGCTATGGTATGCCATTCT-AGAAGCTCAGACGGAAACCGGTACTCCATTCA 390333 Query 19818 TGTGCTACAAGGACGCCGCGAACGCCAAGTCAAATCAGAAGAACATCGGCGCGATCAAGT 19877 || ||||| || | ||| ||||| || || |||||| | || | ||||||| Sbjct 390332 TGATTTACAAAGATTCTTGTAACAGAAAGTCTAACCAAAAGAACCTTGGTACCATCAAGT 390273 Query 19878 CGTCCAACCTGTGTACTGAAATCATGGAGGTTTCCAAGCCGGACGAGACTGCCGTGTGTA 19937 | || ||| ||||| ||||||| | ||| || || || || ||||||||||||| Sbjct 390272 CTTCTAACTTGTGTTGTGAAATCGTCGAGTACTCTTCCCCAGAGGAAACTGCCGTGTGTA 390213 Query 19938 ATCTGGC----GTCCCTGTGCCTGCCGACTTT----CGTC---------AAGGCCTC-CT 19979 | |||| || | |||| || | || | || || | ||| | Sbjct 390212 ACTTGGCTTCTGTTGCATTGCCAGCATTCATTGAAACTTCTGAAGACGGAAAGACTCAAT 390153 Query 19980 CCTTCGACTTTGCCAAATTGTACGAGGTGACCCGGGTCGTCACGCGTAATCTGAATCGCG 20039 | | |||||| || | | || | || ||| ||||| |||||| |||| | | Sbjct 390152 GGTACAACTTTGAGAAGCTACATGAAATTTCCAAGGTTGTCACCCGTAATTTGAACAGAG 390093 Query 20040 TCATCGATCGGAACTTTTACCCGACCGAGGCGGCGCGCAAGTCGAATATGCGCCACCGGC 20099 ||||||| || |||| ||| || || | || | | || || ||| | ||| | | Sbjct 390092 TCATCGACCGTAACTATTATCCCGTTGAAACTGCCAGAAGATCCAACATGAGACACAGAC 390033 Query 20100 CGATCGCGATCGGCGTCCAGGGCCTGGCCGACGTTTTCATGATGCTCGGCCTCTCATTCG 20159 | || || | || || || || ||||||| |||||||||| | | | | |||| Sbjct 390032 CTATTGCTTTGGGTGTTCAAGGGTTGGCCGATACTTTCATGATGTTGCGTATTCCTTTCG 389973 Query 20160 ACGATCCCAAGGCGCGCGAGCTCAACAAGGGCATCTTCGAGGCCGTGTACCACGCGGCCC 20219 || || |||| || | || | | |||| ||| | |||| ||||| |||| Sbjct 389972 ACTCTCAGGAGGCCAAAGAATTGAATATTCACGTCTTTGAGACTATGTATCACGCTGCCC 389913 Query 20220 TCCTGGAATCGTGCGAACTCGCCAAAGAGGACGGCCCGTACGAGACGTTCAAGGGGTCGC 20279 | || ||| ||| | ||| || || ||||| |||||||| |||||||| || | Sbjct 389912 TAGAGGCATCACACGAGTTGGCCCTGGAAGAGGGCCCATACGAGACATTCAAGGGATCCC 389853 Query 20280 CCGCGTCCGAGGGTATCCTCCAGCCGGACATGTGGGGC--GTC----ACTGA-GAATGAG 20332 | || |||||||||| || || |||||||||||| | | ||||| ||| | Sbjct 389852 CTGCTGCCGAGGGTATTCTTCAATTTGACATGTGGGGCAGGACACCTACTGATCTATGGG 389793 Query 20333 TTTTGGAGCGCCCTCAAGGTTGAGATCAAGACCCACGGGCTTCGCAACTCGTTGCTCGTC 20392 || ||| | | | | || || | | |||| || | ||||| || | | Sbjct 389792 ATTGGGA-AACTTTGAGAGCAGACATTATCAAAGACGGTATTAGAAACTCTCTGTTGCTA 389734 Query 20393 GCGCCCATGCCGACCGCCTCGACCGCCCAGATCATGGGGAACAACGAGGCTTTCGAGCCG 20452 || || ||||| || ||||| || |||||||| |||| ||||||| |||||| || Sbjct 389733 GCCCCAATGCCAACTGCCTCTACTTCCCAGATCTTGGGTTACAACGAATGTTTCGAACCA 389674 Query 20453 TACACGACCAACATCTACTTGCGTCGTACACTGGCCGGTGAGTTC 20497 || || | ||||| |||| |||||| || | ||||| ||| Sbjct 389673 TATACCTCAAACATGTACTCACGTCGTGTTCTATCAGGTGAATTC 389629 >seq1 Length=762788 Score = 82.4 bits (90), Expect = 8e-11 Identities = 209/314 (67%), Gaps = 13/314 (4%) Strand=Plus/Minus Query 59826 ATCCACTCCGAGACGTACTCGCTCATGATCGATAAGTTGGTCAAGGATCCGGAAGAGAAG 59885 |||||||||||||| ||||| || |||| || | | |||| || || | |||| Sbjct 619526 ATCCACTCCGAGACCTACTCTCTGCTGATTGACACCTACATCAAAGACCCCAAGGAGAGC 619467 Query 59886 GCTGGTCTGTTCCGTGCCATAGAGACGTCCCCCGCAGTTAAACAAAAAG-CAGAATGGGC 59944 | | || ||| |||||| || | | || ||| | || | ||| | |||||||| Sbjct 619466 GATTTCCTATTCAATGCCATTGAAAA-TATTCCTCAGATCAAGGAGAAGGCCGAATGGGC 619408 Query 59945 CATGCAGTGGATGAGTCCTGGA-------GCATCATTTGCACAACGTCTCATAGCTTTTG 59997 ||| ||| ||| ||| ||| || ||||||| | | | | || |||| Sbjct 619407 CAT-CAG---ATGGATCCAGGACGAAGAGGCCCTATTTGCAGAGAGATTGGTCGCCTTTG 619352 Query 59998 CATGCGTGGAAGGAATCTTCTTCTCTGGCTCGTTCTGTGCTATTTTCTGGCTCAAAAAGC 60057 | ||||||||| | |||||||| || || || |||||||||||||| || ||| Sbjct 619351 CTGCCGTGGAAGGTGTTTTCTTCTCCGGATCCTTTGCCGCTATTTTCTGGCTAAAGAAGA 619292 Query 60058 GTGGCCTCATGCCGGGCCTGAGTTTCTCCAACGAGCTGATTTCCCGGGACGAGGGCCTCC 60117 || | ||||| || || | ||||| || ||||| |||| | | |||||||| || | Sbjct 619291 AAGGTTTGATGCCCGGTCTAACGTTCTCTAATGAGCTAATTTGCAGAGACGAGGGTCTTC 619232 Query 60118 ATCAGGAGTTTGCA 60131 | || |||||| Sbjct 619231 ACACTGATTTTGCA 619218 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548524745147520