Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lachancea_20fermentati_20[genbank_20GCA_5F900074765.1_202016-10-26]
8 sequences; 10,264,457 total letters
Query= NC_028108.1
Length=171454
Score E
Sequences producing significant alignments: (Bits) Value
seq2 251 8e-62
seq1 82.4 8e-11
>seq2
Length=1086951
Score = 251 bits (278), Expect = 8e-62
Identities = 899/1392 (65%), Gaps = 50/1392 (4%)
Strand=Plus/Plus
Query 78534 GTAGATGTTGGTCGTGTACGGCTCGAAAGCCTCGTTGTTCCCCATGATCTGGGCGGTCGA 78593
||| ||||| | || || || |||||| ||||||| |||| |||||||| || ||
Sbjct 389656 GTACATGTTTGAGGTATATGGTTCGAAACATTCGTTGTAACCCAAGATCTGGGAAGTAGA 389715
Query 78594 GGCGGTCGGCATGGGTGCGACCAGTAGAGAATTCCGAAGACCATGC--------GTCTTG 78645
||| || ||||| || || | || ||||| || | || ||| | |||| |
Sbjct 389716 GGCAGTTGGCATTGGGGCTAGCAACAGAGAGTTTCTAATACCGTCTTTGATAATGTCT-G 389774
Query 78646 ATCTCGACCTTTAGGCCGTCCCAAAATTCATTCGCCGCGATCCCCCACATGTCCGGTTGA 78705
|||| | ||| | ||||| | ||| | | | | ||||||||||| ||||
Sbjct 389775 CTCTCAAAGTTTCC-CAATCCCATAGATCAGTAGGTGTCCTGCCCCACATGTCAAATTGA 389833
Query 78706 AGGATACCCTCGGACGCCGGCGACCCCTTGAACGTCTCGTAAGATCCCTCCTCCTTGGCG 78765
|| |||||||||| || || || |||||||| |||||||| | ||||| ||| |||
Sbjct 389834 AGAATACCCTCGGCAGCAGGGGATCCCTTGAATGTCTCGTATGGGCCCTCTTCCAGGGCC 389893
Query 78766 AGTTCGCATGACTCGAGCAGGGCCGCGTGGTACACAGCCTCGAAGATGCCCTTGTTGAGC 78825
| ||| ||| | ||||| ||||| |||| || ||| |||| | | || |
Sbjct 389894 AACTCGTGTGATGCCTCTAGGGCAGCGTGATACATAGTCTCAAAGACGTGAATATTCAAT 389953
Query 78826 TCGCGCGCCTTGGTCTCGTCGAACGAAAGGCCGAGCATCATGAAGACATCGGCCAGGCCC 78885
|| |||| |||||| | || | | ||||||||| |||||||| ||
Sbjct 389954 TCTTTGGCCTCCTGAGAGTCGAAAGGAATACGCAACATCATGAAAGTATCGGCCAACCCT 390013
Query 78886 TGGACGCCGATAGCGATCGGTCGGTGGCGCATGTTGCTCTTTCGGGCCGCCTCGGTCGGG 78945
|| || || | ||| || |||| ||| | ||||||| ||| ||| | || ||
Sbjct 390014 TGAACACCCAAAGCAATAGGTCTGTGTCTCATGTTGGATCTTCTGGCAGTTTCAACGGGA 390073
Query 78946 TAAAAGTTCCGATCGATGACGCGGTTCAGGTTACGCGTGACGACCCGAGTCACCTCGTAC 79005
||| |||| || |||||||| | ||||| ||||| ||||| ||| | | || |
Sbjct 390074 TAATAGTTACGGTCGATGACTCTGTTCAAATTACGGGTGACAACCTTGGAAATTTCATGT 390133
Query 79006 AATTTGGCGAAATCAAAA---TGA---TTTCC------------TTTGATGAAAGTCGGT 79047
| || | || | | ||| ||||| || ||||| | ||
Sbjct 390134 AGCTTCTCAAAGTTGTACCATTGAGTCTTTCCGTCTTCAGAAGTTTCAATGAATGCTGGC 390193
Query 79048 AG-GCACAGCGATGCCAGGTTGCACACGGCCGTCTCGTCCGGGCTAGAAACCTCGATGAT 79106
| ||| | || |||| ||| |||||||| || || || ||| ||| ||||| |||
Sbjct 390194 AATGCA-ACAGAAGCCAAGTTACACACGGCAGTTTCCTCTGGGGAAGAGTACTCGACGAT 390252
Query 79107 TTCTGTGCACAAATTAGACGACTTGATGGTGCCGATGTTCTTCTGGTTGCTCTTCTCGTT 79166
||| ||||| ||||| ||||||||||| || | |||||| ||||| ||| |||
Sbjct 390253 TTCACAACACAAGTTAGAAGACTTGATGGTACCAAGGTTCTTTTGGTTAGACTTTCTGTT 390312
Query 79167 ACAGGCGTCCTTGTAGCACATGTACGGCGTCCCGGTCTCAACCTGACTCTTGAGAACGCC 79226
||| | || ||||| |||| | || || ||||| || |||| | |||| | |
Sbjct 390313 ACAAGAATCTTTGTAAATCATGAATGGAGTACCGGTTTCCGTCTGAGCTTCTAGAATGGC 390372
Query 79227 GTCCCAGATGTCCCGGGCCCGGACAACCTTCTTGTACC--GACCCTGTGCGACGTA-CGT 79283
| ||| | | | | || || | ||| | |||| | |||| | ||||| |||
Sbjct 390373 ATACCATAGCTTCTGAGCTTTGATAGTCTT--TCTACCACGGCCCTCTTGCACGTAACGT 390430
Query 79284 CCGGTACAACTCGTTGAAAGCCTCCCCATAGACATCGGGCAGGCCCGGG-----CACTCG 79338
| || || | | ||| | || ||||||||||||| || | ||||| |||| |
Sbjct 390431 TCA-TATAAAGCTTCGAATTCATCACCATAGACATCGG-CAAGACCGGGAGCTTCACTAG 390488
Query 79339 TGCGGGCACATCAGGTGCCAGTCCTCGTCCTTCTCAACCTTCTCCATGAAGAGGTCCGGG 79398
||| | | |||| ||| || ||| || | ||| ||| |||||| | || ||
Sbjct 390489 ---GGGAAAACAAGGT-CCATTCACCGTTCTCTTGAACTCTCTTCATGAACAAATCTGGA 390544
Query 79399 ATCCACAGGGCCGTGAAGAGGTCGCGGCAACGCATCTCCTCGTCGCCCTGGTTCAGACGC 79458
| ||| || || | ||| | || | | ||| || || || | || ||||| ||
Sbjct 390545 ACCCATAGAGCAGGGAACAAATCTCTGGCACGGATTTCTTCCTTACCGTGGTTTTTCCGG 390604
Query 79459 AGCTCGAGAAAGTCCATGATGTCGGCGTGCCACGGCTCCAGATAGATGGCGAACGAACCC 79518
| |||| |||||| | ||| || | |||||| || || | || || || || | |||
Sbjct 390605 ATGTCGACAAAGTCGAAGATATCAGAGTGCCATGGTTCTAAGTAAATTGCAAAAGCACCT 390664
Query 79519 TTGCGCTTGCCGCCGCCCTGGTTGACGTACCGGGCCGTGTTGTTGAAAACTCGGAGCATG 79578
| |||| ||| || || | ||||| || || ||||||||| | || || | ||||
Sbjct 390665 GGTCTCTTGTTGCCACCTTGATCAACGTAACGAGCAGTGTTGTTGTATACACGAACCATG 390724
Query 79579 GGCACGATGCCGTCGGCGACG--CCGTTCGTCCCGTTGATTCGTGTACCGCTCGCCCGAA 79636
|| | || || | ||| | ||||| || || || | || | | ||||
Sbjct 390725 GGGATAATACCATT--CGAAGTACCGTTGGTACCTGCAATGTAGGAGCCTGTAGAACGAA 390782
Query 79637 TGTTCGAGCAGTGGATTCCGATGCCCCCGGACCACTTGGAGATGTGCGCGCACTCCTTGA 79696
|||| | ||| | |||||| || || | ||||||||| || || || || |
Sbjct 390783 TGTTGTGGATGTGCAATCCGATACCGCCCGCAGTCTTGGAGATCATGGCACATTCTTTCA 390842
Query 79697 GCGTCTCGTAGATGCCCTCGATCGAGTCGTCCTTCATAGCGACCAGGAAGCAGCTCGACA 79756
|| |||||||| || ||||| ||||| || ||||| || |||||||| ||| ||||
Sbjct 390843 AAGTATCGTAGATACCTTCGATGGAGTCCTCTTTCATGGCTACCAGGAAACAGGAAGACA 390902
Query 79757 TCTGTGGGTTGTTCGTACCGGCGTTGAAGAGGGTCGGCGTCGCGTGCGTGAAGAACTTTT 79816
|||| || | |||||||||||||| | || |||| ||||| ||||| | ||
Sbjct 390903 TCTGAGGATGAGGAGTACCGGCGTTGAATAACGTGGGCGATGCGTGAGTGAAATATCTTA 390962
Query 79817 GGCTCATCAGATCGTACGTCTCCTTGACGCGCGGGAGGTCGTCGCCGTGGATGCCGACCG 79876
| ||| |||| ||| || || || | || |||| ||||||||| ||||| |
Sbjct 390963 GAGACATGAGATTGTAGGTTTCGAGCACTCTTTCGATGTCGCGGCCGTGGATACCGACGG 391022
Query 79877 CGACGCGCATGA 79888
| || |||||||
Sbjct 391023 CAACACGCATGA 391034
Score = 172 bits (190), Expect = 6e-38
Identities = 902/1425 (63%), Gaps = 36/1425 (3%)
Strand=Plus/Minus
Query 19103 CCTCAGTACCTTTTCATGCGAGTCGCGGTCGGCATCCATGGCGACGACCTCCCGCGAGTC 19162
|||||| | | ||||||| || || ||||| ||||| ||| |||| || ||||
Sbjct 391047 CCTCAGCATTTGATCATGCGTGTTGCCGTCGGTATCCACGGCCGCGACATCGAAAGAGTG 390988
Query 19163 CGCGAGACATACGACCTGATGAGCCAGAAGTTCTTCACGCACGCGACGCCGACCCTTTTC 19222
| ||| || ||| | || ||| | | | ||||| ||||| |||| || | |||
Sbjct 390987 CTCGAAACCTACAATCTCATGTCTCTAAGATATTTCACTCACGCATCGCCCACGTTATTC 390928
Query 19223 AACGCCGGTACGAACAACCCGCAGATGTCGAGCTGTTTCCTAGTGGCTATGAAGGATGAC 19282
||||||||||| | || |||||||| ||||||||| || || ||||| || |||
Sbjct 390927 AACGCCGGTACTCCTCATCCTCAGATGTCTTCCTGTTTCCTGGTAGCCATGAAAGAGGAC 390868
Query 19283 AGCATTGAGGGCATCTACGAGACGCTCAAGGAGTGCGCGCACATCTCCAAGTGGTCCGGG 19342
||| || || |||||||| || | || || || || ||||||||| | ||
Sbjct 390867 TCCATCGAAGGTATCTACGATACTTTGAAAGAATGTGCCATGATCTCCAAGACTGCGGGC 390808
Query 19343 GGTATCGGGATCCACTGCTCGAATATCCGGTCGAGTGGTACACGAATCAATGGGACGAAC 19402
|||||||| | ||| | || || || || | || | || || || |||
Sbjct 390807 GGTATCGGATTGCACATCCACAACATTCGTTCTACAGGCTCCTACATTGCAGGTACCAAC 390748
Query 19403 GGAGTAGCCGACGGTATCGTCCCAATGCTCCGCGTCTTCAACAACACGGCCAGGTACGTC 19462
|| | | ||||| |||| ||| | || || | ||||||||| || | |||||
Sbjct 390747 GGTACTTCGAATGGTATTATCCCCATGGTTCGTGTATACAACAACACTGCTCGTTACGTT 390688
Query 19463 AACCAGGGGGGCGGCAAACG--CAAGGGCTCGTTCGCCATCTACCTCGAGCCATGGCACG 19520
| || || ||| ||| | || | ||| || || || ||| | || |||||||||
Sbjct 390687 GATCAAGGTGGCAACAAGAGACCAGGTGCT--TTTGCAATTTACTTAGAACCATGGCACT 390630
Query 19521 CGGACGTCATGGATTTCCTCGAACTGCGCCTGAACCAGGGTGACGAGGAGATGCGCTGTC 19580
| || || | || || |||| | || ||||| ||| | || || || || || |
Sbjct 390629 CTGATATCTTCGACTTTGTCGACATCCGGAAAAACCACGGTAAGGAAGAAATCCG-TGCC 390571
Query 19581 -GCGACCTCTTCACGGCCTTGTGGATTCCGGACCTATTCATGGAGAAGGTTGAGAAGGAC 19639
| || | ||| | || | ||| |||| || | |||||| ||| ||| | || ||
Sbjct 390570 AGAGATTTGTTCCCTGCTCTATGGGTTCCAGATTTGTTCATGAAGAGAGTTCAAGAGAAC 390511
Query 19640 GAAGAATGGCACCTGATGTGCCCGCACGAATGCCCTGGCCTACCCGACGTCTACGGCGAG 19699
| |||||| | || | | ||| ||| || || || |||| ||||| || ||
Sbjct 390510 GGTGAATGGACCTTGTTTTCCCCTAGTGAAGCTCCCGGTCTTGCCGATGTCTATGGTGAT 390451
Query 19700 GCGTTCAATGAGTTGTACCGGAC-TTACGTAGCCCAGGGCCGGTTCAAGAAGGTGGTCCG 19758
| ||| | | || || | || |||||| ||||||| | ||| ||
Sbjct 390450 GAATTCGAAGCTTTATA-TGAACGTTACGTGCAAGAGGGCCGTGGTAGAAAGACTATCAA 390392
Query 19759 GGCCCGGGACGTCTGGGACCGCGTCCTCAAAAGC-CAGGTCGAGACCGGCACACCGTACA 19817
|| | | | | ||| | | | || | |||| ||| || ||||| || || | ||
Sbjct 390391 AGCTCAGAAGCTATGGTATGCCATTCT-AGAAGCTCAGACGGAAACCGGTACTCCATTCA 390333
Query 19818 TGTGCTACAAGGACGCCGCGAACGCCAAGTCAAATCAGAAGAACATCGGCGCGATCAAGT 19877
|| ||||| || | ||| ||||| || || |||||| | || | |||||||
Sbjct 390332 TGATTTACAAAGATTCTTGTAACAGAAAGTCTAACCAAAAGAACCTTGGTACCATCAAGT 390273
Query 19878 CGTCCAACCTGTGTACTGAAATCATGGAGGTTTCCAAGCCGGACGAGACTGCCGTGTGTA 19937
| || ||| ||||| ||||||| | ||| || || || || |||||||||||||
Sbjct 390272 CTTCTAACTTGTGTTGTGAAATCGTCGAGTACTCTTCCCCAGAGGAAACTGCCGTGTGTA 390213
Query 19938 ATCTGGC----GTCCCTGTGCCTGCCGACTTT----CGTC---------AAGGCCTC-CT 19979
| |||| || | |||| || | || | || || | ||| |
Sbjct 390212 ACTTGGCTTCTGTTGCATTGCCAGCATTCATTGAAACTTCTGAAGACGGAAAGACTCAAT 390153
Query 19980 CCTTCGACTTTGCCAAATTGTACGAGGTGACCCGGGTCGTCACGCGTAATCTGAATCGCG 20039
| | |||||| || | | || | || ||| ||||| |||||| |||| | |
Sbjct 390152 GGTACAACTTTGAGAAGCTACATGAAATTTCCAAGGTTGTCACCCGTAATTTGAACAGAG 390093
Query 20040 TCATCGATCGGAACTTTTACCCGACCGAGGCGGCGCGCAAGTCGAATATGCGCCACCGGC 20099
||||||| || |||| ||| || || | || | | || || ||| | ||| | |
Sbjct 390092 TCATCGACCGTAACTATTATCCCGTTGAAACTGCCAGAAGATCCAACATGAGACACAGAC 390033
Query 20100 CGATCGCGATCGGCGTCCAGGGCCTGGCCGACGTTTTCATGATGCTCGGCCTCTCATTCG 20159
| || || | || || || || ||||||| |||||||||| | | | | ||||
Sbjct 390032 CTATTGCTTTGGGTGTTCAAGGGTTGGCCGATACTTTCATGATGTTGCGTATTCCTTTCG 389973
Query 20160 ACGATCCCAAGGCGCGCGAGCTCAACAAGGGCATCTTCGAGGCCGTGTACCACGCGGCCC 20219
|| || |||| || | || | | |||| ||| | |||| ||||| ||||
Sbjct 389972 ACTCTCAGGAGGCCAAAGAATTGAATATTCACGTCTTTGAGACTATGTATCACGCTGCCC 389913
Query 20220 TCCTGGAATCGTGCGAACTCGCCAAAGAGGACGGCCCGTACGAGACGTTCAAGGGGTCGC 20279
| || ||| ||| | ||| || || ||||| |||||||| |||||||| || |
Sbjct 389912 TAGAGGCATCACACGAGTTGGCCCTGGAAGAGGGCCCATACGAGACATTCAAGGGATCCC 389853
Query 20280 CCGCGTCCGAGGGTATCCTCCAGCCGGACATGTGGGGC--GTC----ACTGA-GAATGAG 20332
| || |||||||||| || || |||||||||||| | | ||||| ||| |
Sbjct 389852 CTGCTGCCGAGGGTATTCTTCAATTTGACATGTGGGGCAGGACACCTACTGATCTATGGG 389793
Query 20333 TTTTGGAGCGCCCTCAAGGTTGAGATCAAGACCCACGGGCTTCGCAACTCGTTGCTCGTC 20392
|| ||| | | | | || || | | |||| || | ||||| || | |
Sbjct 389792 ATTGGGA-AACTTTGAGAGCAGACATTATCAAAGACGGTATTAGAAACTCTCTGTTGCTA 389734
Query 20393 GCGCCCATGCCGACCGCCTCGACCGCCCAGATCATGGGGAACAACGAGGCTTTCGAGCCG 20452
|| || ||||| || ||||| || |||||||| |||| ||||||| |||||| ||
Sbjct 389733 GCCCCAATGCCAACTGCCTCTACTTCCCAGATCTTGGGTTACAACGAATGTTTCGAACCA 389674
Query 20453 TACACGACCAACATCTACTTGCGTCGTACACTGGCCGGTGAGTTC 20497
|| || | ||||| |||| |||||| || | ||||| |||
Sbjct 389673 TATACCTCAAACATGTACTCACGTCGTGTTCTATCAGGTGAATTC 389629
>seq1
Length=762788
Score = 82.4 bits (90), Expect = 8e-11
Identities = 209/314 (67%), Gaps = 13/314 (4%)
Strand=Plus/Minus
Query 59826 ATCCACTCCGAGACGTACTCGCTCATGATCGATAAGTTGGTCAAGGATCCGGAAGAGAAG 59885
|||||||||||||| ||||| || |||| || | | |||| || || | ||||
Sbjct 619526 ATCCACTCCGAGACCTACTCTCTGCTGATTGACACCTACATCAAAGACCCCAAGGAGAGC 619467
Query 59886 GCTGGTCTGTTCCGTGCCATAGAGACGTCCCCCGCAGTTAAACAAAAAG-CAGAATGGGC 59944
| | || ||| |||||| || | | || ||| | || | ||| | ||||||||
Sbjct 619466 GATTTCCTATTCAATGCCATTGAAAA-TATTCCTCAGATCAAGGAGAAGGCCGAATGGGC 619408
Query 59945 CATGCAGTGGATGAGTCCTGGA-------GCATCATTTGCACAACGTCTCATAGCTTTTG 59997
||| ||| ||| ||| ||| || ||||||| | | | | || ||||
Sbjct 619407 CAT-CAG---ATGGATCCAGGACGAAGAGGCCCTATTTGCAGAGAGATTGGTCGCCTTTG 619352
Query 59998 CATGCGTGGAAGGAATCTTCTTCTCTGGCTCGTTCTGTGCTATTTTCTGGCTCAAAAAGC 60057
| ||||||||| | |||||||| || || || |||||||||||||| || |||
Sbjct 619351 CTGCCGTGGAAGGTGTTTTCTTCTCCGGATCCTTTGCCGCTATTTTCTGGCTAAAGAAGA 619292
Query 60058 GTGGCCTCATGCCGGGCCTGAGTTTCTCCAACGAGCTGATTTCCCGGGACGAGGGCCTCC 60117
|| | ||||| || || | ||||| || ||||| |||| | | |||||||| || |
Sbjct 619291 AAGGTTTGATGCCCGGTCTAACGTTCTCTAATGAGCTAATTTGCAGAGACGAGGGTCTTC 619232
Query 60118 ATCAGGAGTTTGCA 60131
| || ||||||
Sbjct 619231 ACACTGATTTTGCA 619218
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 548524745147520
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