Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lachancea_20fermentati_20[genbank_20GCA_5F900074765.1_202016-10-26]
8 sequences; 10,264,457 total letters
Query= NC_028110.1
Length=171045
Score E
Sequences producing significant alignments: (Bits) Value
seq2 149 7e-31
>seq2
Length=1086951
Score = 149 bits (164), Expect = 7e-31
Identities = 351/523 (67%), Gaps = 8/523 (2%)
Strand=Plus/Minus
Query 53180 CCTCAGTATCTTTTCATGCGCGTCGCCTTGGGTATCCACGGTGACGACTACACGCGTGTC 53239
|||||| || | ||||||| || ||| | ||||||||||| |||| | | ||
Sbjct 391047 CCTCAGCATTTGATCATGCGTGTTGCCGTCGGTATCCACGGCCGCGACATCGAAAGAGTG 390988
Query 53240 CGTGAGACGTACGACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTC 53299
| || || ||| | | ||| | || || || || ||||| |||| || | |||
Sbjct 390987 CTCGAAACCTACAATCTCATGTCTCTAAGATATTTCACTCACGCATCGCCCACGTTATTC 390928
Query 53300 AACGCTGGTACGAATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGAC 53359
||||| ||||| ||| ||||||||||| ||| |||||||| || ||||| || |||
Sbjct 390927 AACGCCGGTACTCCTCATCCTCAGATGTCTTCCTGTTTCCTGGTAGCCATGAAAGAGGAC 390868
Query 53360 TCGATCGACGGCATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGT 53419
|| ||||| || |||||||| || | || || |||||| ||||||||| ||||
Sbjct 390867 TCCATCGAAGGTATCTACGATACTTTGAAAGAATGTGCCATGATCTCCAAGACTGCGGGC 390808
Query 53420 GGTATCGGTATCCACTGCTCGAACGTCCGTGCGAACGGCACACCAATCAAGGGGACGAAC 53479
|||||||| | ||| | ||| | ||| | | ||| | || || || |||
Sbjct 390807 GGTATCGGATTGCACATCCACAACATTCGTTCTACAGGCTCCTACATTGCAGGTACCAAC 390748
Query 53480 GG--CGTCGCCGATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACG 53537
|| | ||| |||| || | || ||| | || || | ||||||||| || || ||||
Sbjct 390747 GGTACTTCG--AATGGTATTATCCCCATGGTTCGTGTATACAACAACACTGCTCGTTACG 390690
Query 53538 TCAACCAGGGTGGTGGGAAGCG-CAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCAC 53596
| | || ||||| ||| | | ||| | | || || || ||| | || || ||||||
Sbjct 390689 TTGATCAAGGTGGCAACAAGAGACCAGGTG-CTTTTGCAATTTACTTAGAACCATGGCAC 390631
Query 53597 GCCGACATTATGGAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGC 53656
| || || | || ||| |||| | || || || ||| | ||||| || || |||
Sbjct 390630 TCTGATATCTTCGACTTTGTCGACATCCGGAAAAACCACGGTAAGGAAGAAATCCG-TGC 390572
Query 53657 C-GTGACCTGTTTACAGCTCTGTGGATTCCGGACCTCTTCATG 53698
| | || |||| | ||||| ||| |||| || | ||||||
Sbjct 390571 CAGAGATTTGTTCCCTGCTCTATGGGTTCCAGATTTGTTCATG 390529
Score = 98.7 bits (108), Expect = 1e-15
Identities = 142/200 (71%), Gaps = 8/200 (4%)
Strand=Plus/Minus
Query 55730 AAGGAGATTTACCGGACGGTGTGGGAGATTCCACAGAAGAGTCTGATTGACATGAGTGCT 55789
||||| ||||| ||| || ||||| | | || |||| | ||||||||| ||||
Sbjct 389502 AAGGACCTTTACAAGACAGTCTGGGAATTGTCTCAAAAGACAATTATTGACATGGCTGCT 389443
Query 55790 GATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAAC----ATCTTCATGGAGAATCC 55845
|||||| | ||||| || || || || ||| ||||| || ||| || |||
Sbjct 389442 GATCGTTCTTGCTACATTGATCAATCACAATCTTTGAACGTGCATATTCGTGC----TCC 389387
Query 55846 TTCACTGGCCAAGTTGAGCTCGATGCACTTTTACGGGTGGAAGAAGGGACTCAAGACGGG 55905
|| ||| || |||| | |||||||||||||| ||||||||||| | ||||| ||
Sbjct 389386 AACAATGGGTAAATTGACCAGTATGCACTTTTACGGATGGAAGAAGGGTTTGAAGACCGG 389327
Query 55906 TATGTACTATCTGCGGACCC 55925
||||||||| || ||||||
Sbjct 389326 TATGTACTACTTGAGGACCC 389307
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 547215945278400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |