Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lachancea_20fermentati_20[genbank_20GCA_5F900074765.1_202016-10-26] 8 sequences; 10,264,457 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq2 149 7e-31 >seq2 Length=1086951 Score = 149 bits (164), Expect = 7e-31 Identities = 351/523 (67%), Gaps = 8/523 (2%) Strand=Plus/Minus Query 53180 CCTCAGTATCTTTTCATGCGCGTCGCCTTGGGTATCCACGGTGACGACTACACGCGTGTC 53239 |||||| || | ||||||| || ||| | ||||||||||| |||| | | || Sbjct 391047 CCTCAGCATTTGATCATGCGTGTTGCCGTCGGTATCCACGGCCGCGACATCGAAAGAGTG 390988 Query 53240 CGTGAGACGTACGACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTC 53299 | || || ||| | | ||| | || || || || ||||| |||| || | ||| Sbjct 390987 CTCGAAACCTACAATCTCATGTCTCTAAGATATTTCACTCACGCATCGCCCACGTTATTC 390928 Query 53300 AACGCTGGTACGAATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGAC 53359 ||||| ||||| ||| ||||||||||| ||| |||||||| || ||||| || ||| Sbjct 390927 AACGCCGGTACTCCTCATCCTCAGATGTCTTCCTGTTTCCTGGTAGCCATGAAAGAGGAC 390868 Query 53360 TCGATCGACGGCATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGT 53419 || ||||| || |||||||| || | || || |||||| ||||||||| |||| Sbjct 390867 TCCATCGAAGGTATCTACGATACTTTGAAAGAATGTGCCATGATCTCCAAGACTGCGGGC 390808 Query 53420 GGTATCGGTATCCACTGCTCGAACGTCCGTGCGAACGGCACACCAATCAAGGGGACGAAC 53479 |||||||| | ||| | ||| | ||| | | ||| | || || || ||| Sbjct 390807 GGTATCGGATTGCACATCCACAACATTCGTTCTACAGGCTCCTACATTGCAGGTACCAAC 390748 Query 53480 GG--CGTCGCCGATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACG 53537 || | ||| |||| || | || ||| | || || | ||||||||| || || |||| Sbjct 390747 GGTACTTCG--AATGGTATTATCCCCATGGTTCGTGTATACAACAACACTGCTCGTTACG 390690 Query 53538 TCAACCAGGGTGGTGGGAAGCG-CAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCAC 53596 | | || ||||| ||| | | ||| | | || || || ||| | || || |||||| Sbjct 390689 TTGATCAAGGTGGCAACAAGAGACCAGGTG-CTTTTGCAATTTACTTAGAACCATGGCAC 390631 Query 53597 GCCGACATTATGGAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGC 53656 | || || | || ||| |||| | || || || ||| | ||||| || || ||| Sbjct 390630 TCTGATATCTTCGACTTTGTCGACATCCGGAAAAACCACGGTAAGGAAGAAATCCG-TGC 390572 Query 53657 C-GTGACCTGTTTACAGCTCTGTGGATTCCGGACCTCTTCATG 53698 | | || |||| | ||||| ||| |||| || | |||||| Sbjct 390571 CAGAGATTTGTTCCCTGCTCTATGGGTTCCAGATTTGTTCATG 390529 Score = 98.7 bits (108), Expect = 1e-15 Identities = 142/200 (71%), Gaps = 8/200 (4%) Strand=Plus/Minus Query 55730 AAGGAGATTTACCGGACGGTGTGGGAGATTCCACAGAAGAGTCTGATTGACATGAGTGCT 55789 ||||| ||||| ||| || ||||| | | || |||| | ||||||||| |||| Sbjct 389502 AAGGACCTTTACAAGACAGTCTGGGAATTGTCTCAAAAGACAATTATTGACATGGCTGCT 389443 Query 55790 GATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAAC----ATCTTCATGGAGAATCC 55845 |||||| | ||||| || || || || ||| ||||| || ||| || ||| Sbjct 389442 GATCGTTCTTGCTACATTGATCAATCACAATCTTTGAACGTGCATATTCGTGC----TCC 389387 Query 55846 TTCACTGGCCAAGTTGAGCTCGATGCACTTTTACGGGTGGAAGAAGGGACTCAAGACGGG 55905 || ||| || |||| | |||||||||||||| ||||||||||| | ||||| || Sbjct 389386 AACAATGGGTAAATTGACCAGTATGCACTTTTACGGATGGAAGAAGGGTTTGAAGACCGG 389327 Query 55906 TATGTACTATCTGCGGACCC 55925 ||||||||| || |||||| Sbjct 389326 TATGTACTACTTGAGGACCC 389307 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547215945278400