Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lachancea_20fermentati_20[genbank_20GCA_5F900074765.1_202016-10-26] 8 sequences; 10,264,457 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq4 134 2e-26 seq2 125 8e-24 seq8 113 5e-20 seq6 105 8e-18 >seq4 Length=1192607 Score = 134 bits (148), Expect = 2e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| |||||||| || ||||| |||||||||||| | ||||||||||| | Sbjct 499303 ATGCAGATCTTCGTCAAGACTCTAACCGGTAAGACTATTACTTTGGAGGTTGAGTCTTCT 499362 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || | || | || | || ||||| |||||||| || ||||| |||||||| Sbjct 499363 GACACGATAGACAACGTCAAATCCAAGATTCAAGACAAGGAAGGTATTCCACCAGACCAA 499422 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || | | ||||| || ||||||||| | ||||||| | || || | ||||| || Sbjct 499423 CAAAGATTGATTTTCGCCGGTAAGCAATTGGAGGATGGCAGAACGCTTTCTGACTACAAC 499482 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | |||||||| || ||| | ||| | || ||| | || | ||||| Sbjct 499483 ATTCAAAAGGAGTCTACTTTACATTTGGTTTTGAGACTAAGAGGTGG 499529 Score = 122 bits (134), Expect = 1e-22 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| |||||||| || ||||| ||||| || || | || || || || | Sbjct 498847 ATGCAGATCTTCGTCAAGACTCTAACCGGTAAGACCATCACCTTGGAAGTCGAATCCTCT 498906 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| ||| | || | || | || || ||||| ||||| || ||||| || |||||| Sbjct 498907 GATACCATCGACAACGTTAAATCCAAGATCCAGGATAAGGAAGGTATTCCACCTGACCAG 498966 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || | || ||||| ||||||||||| | ||||||| | || || | ||||| || Sbjct 498967 CAAAGACTGATTTTCGCTGGTAAGCAGTTGGAGGATGGCAGAACGCTTTCTGACTACAAC 499026 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||||||||| || ||| | ||| | || ||| | || | ||||| Sbjct 499027 ATCCAAAAGGAGTCTACTTTACATTTGGTTTTGAGACTAAGAGGTGG 499073 Score = 118 bits (130), Expect = 1e-21 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 |||||| || || |||||||| | ||||||||||| || ||||| |||||||| || Sbjct 498618 AATGCAGATTTTCGTCAAGACTTTAACCGGCAAGACCATCACTCTGGAGGTTGAATCCTC 498677 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 ||||| ||| | || | || | || || ||||| ||||| || ||||| || || || Sbjct 498678 TGATACCATCGACAACGTCAAATCCAAGATCCAGGATAAGGAAGGTATTCCACCTGATCA 498737 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584 || | | ||||| ||||||||||| | ||||||| | || || | || || || Sbjct 498738 ACAAAGATTGATTTTCGCTGGTAAGCAGTTGGAGGATGGCAGAACTCTTTCTGATTACAA 498797 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | | ||||||||||| || | || || || ||| | || | ||||| Sbjct 498798 TATTCAAAAGGAATCTACCTTACACCTGGTTTTGAGGCTAAGAGGTGG 498845 Score = 116 bits (128), Expect = 4e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || || |||||||| | ||||| ||||| || ||| | ||||||||||| | Sbjct 499531 ATGCAGATTTTCGTCAAGACTTTAACCGGTAAGACCATCACTTTGGAGGTTGAGTCTTCT 499590 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || | || | || | || ||||| |||||||| || || || || |||||| Sbjct 499591 GACACGATAGACAACGTTAAATCCAAGATTCAAGACAAGGAAGGTATCCCACCTGACCAG 499650 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || | || ||||| || |||||||| | ||||||| | || || | ||||| || Sbjct 499651 CAAAGACTGATTTTCGCCGGTAAGCAGTTGGAGGATGGCAGAACGCTTTCTGACTACAAC 499710 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||||||||| ||||| || || | || ||| | || | ||||| Sbjct 499711 ATCCAAAAGGAGTCCACGCTCCACTTGGTTTTGAGACTAAGAGGTGG 499757 Score = 116 bits (128), Expect = 4e-21 Identities = 144/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| |||||||| || ||||| ||||| || || | || || || || | Sbjct 499759 ATGCAGATCTTCGTCAAGACTCTAACCGGTAAGACCATCACCTTGGAAGTCGAATCCTCT 499818 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| ||| | || | ||| | || ||||| |||||||| || ||||| || |||||| Sbjct 499819 GATACCATCGACAACGTTAAGTCCAAGATTCAAGACAAGGAAGGTATTCCACCTGACCAG 499878 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || | | ||||| || ||||||||| | ||||||| | || || | || || ||| Sbjct 499879 CAAAGATTGATTTTCGCCGGTAAGCAATTGGAGGATGGCAGAACTCTTTCTGATTACAAT 499938 Query 27586 GTCCAAAAGGAATCCAC 27602 | ||||||||||| || Sbjct 499939 ATTCAAAAGGAATCTAC 499955 Score = 113 bits (124), Expect = 5e-20 Identities = 143/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || || |||||||| | || || ||||||||||| | || || || || | Sbjct 499075 ATGCAGATTTTCGTCAAGACTTTGACAGGTAAGACTATTACCTTGGAAGTCGAATCCTCT 499134 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| ||| | ||| | || | || ||||| |||||||| || ||||| || |||||| Sbjct 499135 GATACCATCGACAATGTCAAATCCAAGATTCAAGACAAGGAAGGTATTCCACCTGACCAG 499194 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || | | ||||| || ||||||||| | ||||||| | || || | || || ||| Sbjct 499195 CAAAGATTGATTTTCGCCGGTAAGCAATTGGAGGATGGCAGAACTCTTTCTGATTACAAT 499254 Query 27586 GTCCAAAAGGAATCCAC 27602 | ||||||||||| || Sbjct 499255 ATTCAAAAGGAATCTAC 499271 >seq2 Length=1086951 Score = 125 bits (138), Expect = 8e-24 Identities = 774/1229 (63%), Gaps = 45/1229 (4%) Strand=Plus/Plus Query 80539 CCCCACATGTCGTGCTGCAAGATGCCCTCCGACGCCGGAGACCCCGCGAACGTCTCGTAC 80598 ||||||||||| || | || ||||| | || || || ||| ||| |||||||| Sbjct 389816 CCCCACATGTCAAATTGAAGAATACCCTCGGCAGCAGGGGATCCCTTGAATGTCTCGTAT 389875 Query 80599 GGGCCCTCCGTCTTGGCCAGCTCACACGACTCCATAAGGGCCGCGTGATAAATGCACTCA 80658 |||||||| | ||||| ||| || || ||||| |||||||| || |||| Sbjct 389876 GGGCCCTCTTCCAGGGCCAACTCGTGTGATGCCTCTAGGGCAGCGTGATACATAGTCTCA 389935 Query 80659 AAGACGCCCTTGTTCACACCGCGCGCCTGTGGGTCGTCGAACGACAAGCCCATCATCATG 80718 |||||| | |||| | |||| | |||||| | | | || ||||||| Sbjct 389936 AAGACGTGAATATTCAATTCTTTGGCCTCCTGAGAGTCGAAAGGAATACGCAACATCATG 389995 Query 80719 AACACGTCAGCCAGGCCCTGAACGCCGATGGCGATCGGGCGGTGGCGCTTGTTCGATCGC 80778 || || |||| || ||||| || | || || || | ||| | | |||| |||| Sbjct 389996 AAAGTATCGGCCAACCCTTGAACACCCAAAGCAATAGGTCTGTGTCTCATGTTGGATCTT 390055 Query 80779 TCGGCCTCCGGAATTGGGTAAAAGTTATTATCGATGACGCGGTTCAGGTTGCGTGTAACA 80838 ||| || || ||| ||||| |||||||| | ||||| || || || ||| Sbjct 390056 CTGGCAGTTTCAACGGGATAATAGTTACGGTCGATGACTCTGTTCAAATTACGGGTGACA 390115 Query 80839 ACCCGTGTAACATCATGAAGTTTCTGAAAGTCGAA---TTGGTTC---CC--CTTCACAA 80890 ||| | || ||||| || |||| ||||| | | ||| || || ||||| || Sbjct 390116 ACCTTGGAAATTTCATGTAGCTTCTCAAAGTTGTACCATTGAGTCTTTCCGTCTTCAGAA 390175 Query 80891 ----------ATGCCGG-AAGGCTCAGGGACGCCAGATTGCACACGGCCACCTCTTCAGC 80939 |||| || || || | || |||| || |||||||| || || | Sbjct 390176 GTTTCAATGAATGCTGGCAATGCA-ACAGAAGCCAAGTTACACACGGCAGTTTCCTCTGG 390234 Query 80940 ATCTGTAAACTCGACGATTTCCGTGCACAAATTAGAAGACTTAATTGTACCCAGGTTTTT 80999 | ||||||||||||| ||||| ||||||||||| || ||||| ||||| || Sbjct 390235 GGAAGAGTACTCGACGATTTCACAACACAAGTTAGAAGACTTGATGGTACCAAGGTTCTT 390294 Query 81000 CTGGTTTGACTTGGCGTTGCAAGCGTCCTTGTAGCACATGTACGGGGTACCGGTCTCGAC 81059 ||||| ||||| ||| |||| || ||||| |||| | || |||||||| || Sbjct 390295 TTGGTTAGACTTTCTGTTACAAGAATCTTTGTAAATCATGAATGGAGTACCGGTTTCCGT 390354 Query 81060 CTGTGACTTGAGGATGGCGTCCCAAATCTCGCGCGCCTTGACCACCTTGCGGAATTTGCC 81119 ||| | | || ||||| | ||| | || | || |||| ||| | ||| Sbjct 390355 CTGAGCTTCTAGAATGGCATACCATAGCTTCTGAGCTTTGATAGTCTTTCTACCACGGCC 390414 Query 81120 TTCGGCCACATACTTGGCGTA---AGCTTCGTCGAACTTGGCACCGTGAAGTTCAGTGAG 81176 || ||| || | || ||||||| || | |||| | | || | || Sbjct 390415 CTCTTGCACGTAACGTTCATATAAAGCTTCG---AATTCATCACCATAGACATCGGCAAG 390471 Query 81177 GTCTGGGCACTCGTTAGGGCACATCAGGTGCCAGTCGGTGTCGTTCTCTACAGC---CTT 81233 | || || ||||| | | || | ||| || |||||||| | | ||| Sbjct 390472 ACCGGGAGCTTCACTAGGGGAAAACAAGGTCCATTCAC---CGTTCTCTTGAACTCTCTT 390528 Query 81234 CATGAAAGCGTCAGGGATCCAGAGGGCGGTGAACAGGTCGC-GGCAGCGCGCCTCCTCAT 81292 |||||| || || | ||| || || | ||||| || | |||| || || || | Sbjct 390529 CATGAACAAATCTGGAACCCATAGAGCAGGGAACAAATCTCTGGCA-CGGATTTCTTCCT 390587 Query 81293 CACCCTGGTTGAGGCGCAACTCGAGAAAGTCCATGATGTCCGCATGCCATGGCTCCAGAT 81352 ||| ||||| || | |||| |||||| | ||| || | |||||||| || | | Sbjct 390588 TACCGTGGTTTTTCCGGATGTCGACAAAGTCGAAGATATCAGAGTGCCATGGTTCTAAGT 390647 Query 81353 ACACGGCGATCGACCCCTTGCGACG----GCCACCCTGGTTGACGTAACGGGCAGTCGCG 81408 | | || | | | ||| | | |||||| || | |||||||| ||||| | Sbjct 390648 AAATTGCAAAAG-CACCTGGTCTCTTGTTGCCACCTTGATCAACGTAACGAGCAGTGTTG 390706 Query 81409 TTAAATACACGCAACATAGGGATGATACCATCTGACTGACCGTTCGTACCCACGATACGC 81468 || ||||||| | ||| ||||| ||||||| || |||||| ||||| | || Sbjct 390707 TTGTATACACGAACCATGGGGATAATACCATTCGAAGTACCGTTGGTACCTGCAATGTAG 390766 Query 81469 GACCCCTTGGCGCGCACCTTGCTGAT-TGAAAGACCGATGCCACCTGACCACTTTGAAAT 81527 || || | | || | ||| ||| || || ||||| || || | ||| || || Sbjct 390767 GAGCCTGTAGAACGAATGTTGTGGATGTGCAAT-CCGATACCGCCCGCAGTCTTGGAGAT 390825 Query 81528 CTGAGCACACCGGTTCATGGTCTCATAAATTCCCTCGATGCTATCTTTTTTCATGTCAAG 81587 | ||||| |||| || || || || || |||||| || | ||||||| | | Sbjct 390826 CATGGCACATTCTTTCAAAGTATCGTAGATACCTTCGATGGAGTCCTCTTTCATGGCTAC 390885 Query 81588 CAAGAAACAGCTTGACATCTGAGGGCTTTTTGAG--CCGGCATTGAACAGTGTTGGGGTC 81645 || ||||||| ||||||||||| | ||| ||||| ||||| | || || | Sbjct 390886 CAGGAAACAGGAAGACATCTGAGG--ATGAGGAGTACCGGCGTTGAATAACGTGGGCGAT 390943 Query 81646 GCGTGAATGAAATAACGGTTTGACATCAGGTCATAGGTTTCCTTGACGCGTGGAATATCG 81705 |||||| ||||||| | ||||| || | |||||||| || | | || ||| Sbjct 390944 GCGTGAGTGAAATATCTTAGAGACATGAGATTGTAGGTTTCGAGCACTCTTTCGATGTCG 391003 Query 81706 TCACCGTGAATACCGATAGCTACACGCAT 81734 ||||| ||||||| || |||||||| Sbjct 391004 CGGCCGTGGATACCGACGGCAACACGCAT 391032 >seq8 Length=1564113 Score = 113 bits (124), Expect = 5e-20 Identities = 143/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||| ||||| ||||| | ||||| ||||| ||||| ||||| || ||||| | Sbjct 561232 ATGCAAATTTTTGTTAAGACCTTAACCGGTAAGACAATTACCCTTGAAGTCGAGTCTTCT 561173 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || | ||| | ||| | || || || ||||||||||| || || || ||||| Sbjct 561172 GACACTATCGACAATGTCAAGTCCAAGATCCAAGACAAGGAGGGTATCCCACCTGACCAA 561113 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || | | || ||||||||||||||| | || |||| | || | | ||||| || Sbjct 561112 CAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGCAGAACTTTGTCTGACTACAAC 561053 Query 27586 GTCCAAAAGGAATCCAC 27602 |||||||||| || || Sbjct 561052 ATCCAAAAGGAGTCTAC 561036 >seq6 Length=1504611 Score = 105 bits (116), Expect = 8e-18 Identities = 136/188 (72%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 27415 TTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATT 27474 ||||| ||||| | || || ||||| |||||| | || || || || || | |||| Sbjct 86082 TTTGTGAAGACCTTGACTGGTAAGACCATTACTTTGGAAGTCGAATCTTCAGACACCATT 86141 Query 27475 GCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTA 27534 | || | ||| |||| ||||| |||||||| || |||||||| ||||| || | | Sbjct 86142 GACAACGTCAAGTCTAAGATTCAAGACAAGGAAGGTATTCCTCCTGACCAACAAAGATTG 86201 Query 27535 ATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAG 27594 || ||||||||||||||| | || |||| | ||| | | ||||| || | |||||| Sbjct 86202 ATCTTTGCTGGTAAGCAATTGGAAGATGGCAGAACCTTGTCTGACTACAACATTCAAAAG 86261 Query 27595 GAATCCAC 27602 ||||| || Sbjct 86262 GAATCTAC 86269 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570310342968960