Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lachancea_20fermentati_20[genbank_20GCA_5F900074765.1_202016-10-26]
8 sequences; 10,264,457 total letters
Query= NC_028112.1
Length=178262
Score E
Sequences producing significant alignments: (Bits) Value
seq4 134 2e-26
seq2 125 8e-24
seq8 113 5e-20
seq6 105 8e-18
>seq4
Length=1192607
Score = 134 bits (148), Expect = 2e-26
Identities = 166/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| ||||| |||||||| || ||||| |||||||||||| | ||||||||||| |
Sbjct 499303 ATGCAGATCTTCGTCAAGACTCTAACCGGTAAGACTATTACTTTGGAGGTTGAGTCTTCT 499362
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | || | || | || | || ||||| |||||||| || ||||| ||||||||
Sbjct 499363 GACACGATAGACAACGTCAAATCCAAGATTCAAGACAAGGAAGGTATTCCACCAGACCAA 499422
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|| | | ||||| || ||||||||| | ||||||| | || || | ||||| ||
Sbjct 499423 CAAAGATTGATTTTCGCCGGTAAGCAATTGGAGGATGGCAGAACGCTTTCTGACTACAAC 499482
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
| |||||||| || ||| | ||| | || ||| | || | |||||
Sbjct 499483 ATTCAAAAGGAGTCTACTTTACATTTGGTTTTGAGACTAAGAGGTGG 499529
Score = 122 bits (134), Expect = 1e-22
Identities = 163/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| ||||| |||||||| || ||||| ||||| || || | || || || || |
Sbjct 498847 ATGCAGATCTTCGTCAAGACTCTAACCGGTAAGACCATCACCTTGGAAGTCGAATCCTCT 498906
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|||| ||| | || | || | || || ||||| ||||| || ||||| || ||||||
Sbjct 498907 GATACCATCGACAACGTTAAATCCAAGATCCAGGATAAGGAAGGTATTCCACCTGACCAG 498966
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|| | || ||||| ||||||||||| | ||||||| | || || | ||||| ||
Sbjct 498967 CAAAGACTGATTTTCGCTGGTAAGCAGTTGGAGGATGGCAGAACGCTTTCTGACTACAAC 499026
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|||||||||| || ||| | ||| | || ||| | || | |||||
Sbjct 499027 ATCCAAAAGGAGTCTACTTTACATTTGGTTTTGAGACTAAGAGGTGG 499073
Score = 118 bits (130), Expect = 1e-21
Identities = 163/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464
|||||| || || |||||||| | ||||||||||| || ||||| |||||||| ||
Sbjct 498618 AATGCAGATTTTCGTCAAGACTTTAACCGGCAAGACCATCACTCTGGAGGTTGAATCCTC 498677
Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524
||||| ||| | || | || | || || ||||| ||||| || ||||| || || ||
Sbjct 498678 TGATACCATCGACAACGTCAAATCCAAGATCCAGGATAAGGAAGGTATTCCACCTGATCA 498737
Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584
|| | | ||||| ||||||||||| | ||||||| | || || | || || ||
Sbjct 498738 ACAAAGATTGATTTTCGCTGGTAAGCAGTTGGAGGATGGCAGAACTCTTTCTGATTACAA 498797
Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
| | ||||||||||| || | || || || ||| | || | |||||
Sbjct 498798 TATTCAAAAGGAATCTACCTTACACCTGGTTTTGAGGCTAAGAGGTGG 498845
Score = 116 bits (128), Expect = 4e-21
Identities = 162/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| || || |||||||| | ||||| ||||| || ||| | ||||||||||| |
Sbjct 499531 ATGCAGATTTTCGTCAAGACTTTAACCGGTAAGACCATCACTTTGGAGGTTGAGTCTTCT 499590
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | || | || | || | || ||||| |||||||| || || || || ||||||
Sbjct 499591 GACACGATAGACAACGTTAAATCCAAGATTCAAGACAAGGAAGGTATCCCACCTGACCAG 499650
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|| | || ||||| || |||||||| | ||||||| | || || | ||||| ||
Sbjct 499651 CAAAGACTGATTTTCGCCGGTAAGCAGTTGGAGGATGGCAGAACGCTTTCTGACTACAAC 499710
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|||||||||| ||||| || || | || ||| | || | |||||
Sbjct 499711 ATCCAAAAGGAGTCCACGCTCCACTTGGTTTTGAGACTAAGAGGTGG 499757
Score = 116 bits (128), Expect = 4e-21
Identities = 144/197 (73%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| ||||| |||||||| || ||||| ||||| || || | || || || || |
Sbjct 499759 ATGCAGATCTTCGTCAAGACTCTAACCGGTAAGACCATCACCTTGGAAGTCGAATCCTCT 499818
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|||| ||| | || | ||| | || ||||| |||||||| || ||||| || ||||||
Sbjct 499819 GATACCATCGACAACGTTAAGTCCAAGATTCAAGACAAGGAAGGTATTCCACCTGACCAG 499878
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|| | | ||||| || ||||||||| | ||||||| | || || | || || |||
Sbjct 499879 CAAAGATTGATTTTCGCCGGTAAGCAATTGGAGGATGGCAGAACTCTTTCTGATTACAAT 499938
Query 27586 GTCCAAAAGGAATCCAC 27602
| ||||||||||| ||
Sbjct 499939 ATTCAAAAGGAATCTAC 499955
Score = 113 bits (124), Expect = 5e-20
Identities = 143/197 (73%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| || || |||||||| | || || ||||||||||| | || || || || |
Sbjct 499075 ATGCAGATTTTCGTCAAGACTTTGACAGGTAAGACTATTACCTTGGAAGTCGAATCCTCT 499134
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|||| ||| | ||| | || | || ||||| |||||||| || ||||| || ||||||
Sbjct 499135 GATACCATCGACAATGTCAAATCCAAGATTCAAGACAAGGAAGGTATTCCACCTGACCAG 499194
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|| | | ||||| || ||||||||| | ||||||| | || || | || || |||
Sbjct 499195 CAAAGATTGATTTTCGCCGGTAAGCAATTGGAGGATGGCAGAACTCTTTCTGATTACAAT 499254
Query 27586 GTCCAAAAGGAATCCAC 27602
| ||||||||||| ||
Sbjct 499255 ATTCAAAAGGAATCTAC 499271
>seq2
Length=1086951
Score = 125 bits (138), Expect = 8e-24
Identities = 774/1229 (63%), Gaps = 45/1229 (4%)
Strand=Plus/Plus
Query 80539 CCCCACATGTCGTGCTGCAAGATGCCCTCCGACGCCGGAGACCCCGCGAACGTCTCGTAC 80598
||||||||||| || | || ||||| | || || || ||| ||| ||||||||
Sbjct 389816 CCCCACATGTCAAATTGAAGAATACCCTCGGCAGCAGGGGATCCCTTGAATGTCTCGTAT 389875
Query 80599 GGGCCCTCCGTCTTGGCCAGCTCACACGACTCCATAAGGGCCGCGTGATAAATGCACTCA 80658
|||||||| | ||||| ||| || || ||||| |||||||| || ||||
Sbjct 389876 GGGCCCTCTTCCAGGGCCAACTCGTGTGATGCCTCTAGGGCAGCGTGATACATAGTCTCA 389935
Query 80659 AAGACGCCCTTGTTCACACCGCGCGCCTGTGGGTCGTCGAACGACAAGCCCATCATCATG 80718
|||||| | |||| | |||| | |||||| | | | || |||||||
Sbjct 389936 AAGACGTGAATATTCAATTCTTTGGCCTCCTGAGAGTCGAAAGGAATACGCAACATCATG 389995
Query 80719 AACACGTCAGCCAGGCCCTGAACGCCGATGGCGATCGGGCGGTGGCGCTTGTTCGATCGC 80778
|| || |||| || ||||| || | || || || | ||| | | |||| ||||
Sbjct 389996 AAAGTATCGGCCAACCCTTGAACACCCAAAGCAATAGGTCTGTGTCTCATGTTGGATCTT 390055
Query 80779 TCGGCCTCCGGAATTGGGTAAAAGTTATTATCGATGACGCGGTTCAGGTTGCGTGTAACA 80838
||| || || ||| ||||| |||||||| | ||||| || || || |||
Sbjct 390056 CTGGCAGTTTCAACGGGATAATAGTTACGGTCGATGACTCTGTTCAAATTACGGGTGACA 390115
Query 80839 ACCCGTGTAACATCATGAAGTTTCTGAAAGTCGAA---TTGGTTC---CC--CTTCACAA 80890
||| | || ||||| || |||| ||||| | | ||| || || ||||| ||
Sbjct 390116 ACCTTGGAAATTTCATGTAGCTTCTCAAAGTTGTACCATTGAGTCTTTCCGTCTTCAGAA 390175
Query 80891 ----------ATGCCGG-AAGGCTCAGGGACGCCAGATTGCACACGGCCACCTCTTCAGC 80939
|||| || || || | || |||| || |||||||| || || |
Sbjct 390176 GTTTCAATGAATGCTGGCAATGCA-ACAGAAGCCAAGTTACACACGGCAGTTTCCTCTGG 390234
Query 80940 ATCTGTAAACTCGACGATTTCCGTGCACAAATTAGAAGACTTAATTGTACCCAGGTTTTT 80999
| ||||||||||||| ||||| ||||||||||| || ||||| ||||| ||
Sbjct 390235 GGAAGAGTACTCGACGATTTCACAACACAAGTTAGAAGACTTGATGGTACCAAGGTTCTT 390294
Query 81000 CTGGTTTGACTTGGCGTTGCAAGCGTCCTTGTAGCACATGTACGGGGTACCGGTCTCGAC 81059
||||| ||||| ||| |||| || ||||| |||| | || |||||||| ||
Sbjct 390295 TTGGTTAGACTTTCTGTTACAAGAATCTTTGTAAATCATGAATGGAGTACCGGTTTCCGT 390354
Query 81060 CTGTGACTTGAGGATGGCGTCCCAAATCTCGCGCGCCTTGACCACCTTGCGGAATTTGCC 81119
||| | | || ||||| | ||| | || | || |||| ||| | |||
Sbjct 390355 CTGAGCTTCTAGAATGGCATACCATAGCTTCTGAGCTTTGATAGTCTTTCTACCACGGCC 390414
Query 81120 TTCGGCCACATACTTGGCGTA---AGCTTCGTCGAACTTGGCACCGTGAAGTTCAGTGAG 81176
|| ||| || | || ||||||| || | |||| | | || | ||
Sbjct 390415 CTCTTGCACGTAACGTTCATATAAAGCTTCG---AATTCATCACCATAGACATCGGCAAG 390471
Query 81177 GTCTGGGCACTCGTTAGGGCACATCAGGTGCCAGTCGGTGTCGTTCTCTACAGC---CTT 81233
| || || ||||| | | || | ||| || |||||||| | | |||
Sbjct 390472 ACCGGGAGCTTCACTAGGGGAAAACAAGGTCCATTCAC---CGTTCTCTTGAACTCTCTT 390528
Query 81234 CATGAAAGCGTCAGGGATCCAGAGGGCGGTGAACAGGTCGC-GGCAGCGCGCCTCCTCAT 81292
|||||| || || | ||| || || | ||||| || | |||| || || || |
Sbjct 390529 CATGAACAAATCTGGAACCCATAGAGCAGGGAACAAATCTCTGGCA-CGGATTTCTTCCT 390587
Query 81293 CACCCTGGTTGAGGCGCAACTCGAGAAAGTCCATGATGTCCGCATGCCATGGCTCCAGAT 81352
||| ||||| || | |||| |||||| | ||| || | |||||||| || | |
Sbjct 390588 TACCGTGGTTTTTCCGGATGTCGACAAAGTCGAAGATATCAGAGTGCCATGGTTCTAAGT 390647
Query 81353 ACACGGCGATCGACCCCTTGCGACG----GCCACCCTGGTTGACGTAACGGGCAGTCGCG 81408
| | || | | | ||| | | |||||| || | |||||||| ||||| |
Sbjct 390648 AAATTGCAAAAG-CACCTGGTCTCTTGTTGCCACCTTGATCAACGTAACGAGCAGTGTTG 390706
Query 81409 TTAAATACACGCAACATAGGGATGATACCATCTGACTGACCGTTCGTACCCACGATACGC 81468
|| ||||||| | ||| ||||| ||||||| || |||||| ||||| | ||
Sbjct 390707 TTGTATACACGAACCATGGGGATAATACCATTCGAAGTACCGTTGGTACCTGCAATGTAG 390766
Query 81469 GACCCCTTGGCGCGCACCTTGCTGAT-TGAAAGACCGATGCCACCTGACCACTTTGAAAT 81527
|| || | | || | ||| ||| || || ||||| || || | ||| || ||
Sbjct 390767 GAGCCTGTAGAACGAATGTTGTGGATGTGCAAT-CCGATACCGCCCGCAGTCTTGGAGAT 390825
Query 81528 CTGAGCACACCGGTTCATGGTCTCATAAATTCCCTCGATGCTATCTTTTTTCATGTCAAG 81587
| ||||| |||| || || || || || |||||| || | ||||||| | |
Sbjct 390826 CATGGCACATTCTTTCAAAGTATCGTAGATACCTTCGATGGAGTCCTCTTTCATGGCTAC 390885
Query 81588 CAAGAAACAGCTTGACATCTGAGGGCTTTTTGAG--CCGGCATTGAACAGTGTTGGGGTC 81645
|| ||||||| ||||||||||| | ||| ||||| ||||| | || || |
Sbjct 390886 CAGGAAACAGGAAGACATCTGAGG--ATGAGGAGTACCGGCGTTGAATAACGTGGGCGAT 390943
Query 81646 GCGTGAATGAAATAACGGTTTGACATCAGGTCATAGGTTTCCTTGACGCGTGGAATATCG 81705
|||||| ||||||| | ||||| || | |||||||| || | | || |||
Sbjct 390944 GCGTGAGTGAAATATCTTAGAGACATGAGATTGTAGGTTTCGAGCACTCTTTCGATGTCG 391003
Query 81706 TCACCGTGAATACCGATAGCTACACGCAT 81734
||||| ||||||| || ||||||||
Sbjct 391004 CGGCCGTGGATACCGACGGCAACACGCAT 391032
>seq8
Length=1564113
Score = 113 bits (124), Expect = 5e-20
Identities = 143/197 (73%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
|||||||| ||||| ||||| | ||||| ||||| ||||| ||||| || ||||| |
Sbjct 561232 ATGCAAATTTTTGTTAAGACCTTAACCGGTAAGACAATTACCCTTGAAGTCGAGTCTTCT 561173
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | || | ||| | ||| | || || || ||||||||||| || || || |||||
Sbjct 561172 GACACTATCGACAATGTCAAGTCCAAGATCCAAGACAAGGAGGGTATCCCACCTGACCAA 561113
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|| | | || ||||||||||||||| | || |||| | || | | ||||| ||
Sbjct 561112 CAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGCAGAACTTTGTCTGACTACAAC 561053
Query 27586 GTCCAAAAGGAATCCAC 27602
|||||||||| || ||
Sbjct 561052 ATCCAAAAGGAGTCTAC 561036
>seq6
Length=1504611
Score = 105 bits (116), Expect = 8e-18
Identities = 136/188 (72%), Gaps = 0/188 (0%)
Strand=Plus/Plus
Query 27415 TTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATT 27474
||||| ||||| | || || ||||| |||||| | || || || || || | ||||
Sbjct 86082 TTTGTGAAGACCTTGACTGGTAAGACCATTACTTTGGAAGTCGAATCTTCAGACACCATT 86141
Query 27475 GCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTA 27534
| || | ||| |||| ||||| |||||||| || |||||||| ||||| || | |
Sbjct 86142 GACAACGTCAAGTCTAAGATTCAAGACAAGGAAGGTATTCCTCCTGACCAACAAAGATTG 86201
Query 27535 ATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAG 27594
|| ||||||||||||||| | || |||| | ||| | | ||||| || | ||||||
Sbjct 86202 ATCTTTGCTGGTAAGCAATTGGAAGATGGCAGAACCTTGTCTGACTACAACATTCAAAAG 86261
Query 27595 GAATCCAC 27602
||||| ||
Sbjct 86262 GAATCTAC 86269
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 570310342968960
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